Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus

Growth modelling is essential to inform fisheries management but is often hampered by sampling biases and imperfect data. Additional methods such as interpolating data through back-calculation may be used to account for sampling bias but are often complex and time-consuming. Here, we present an appr...

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Published in:Fishes
Main Authors: Ana Neves, Ana Rita Vieira, Vera Sequeira, Elisabete Silva, Frederica Silva, Ana Marta Duarte, Susana Mendes, Rui Ganhão, Carlos Assis, Rui Rebelo, Maria Filomena Magalhães, Maria Manuel Gil, Leonel Serrano Gordo
Format: Article in Journal/Newspaper
Language:English
Published: MDPI AG 2022
Subjects:
Online Access:https://doi.org/10.3390/fishes7010052
https://doaj.org/article/d889f48fd1e24ea893e7592e3ba274d1
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spelling ftdoajarticles:oai:doaj.org/article:d889f48fd1e24ea893e7592e3ba274d1 2023-05-15T17:41:27+02:00 Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus Ana Neves Ana Rita Vieira Vera Sequeira Elisabete Silva Frederica Silva Ana Marta Duarte Susana Mendes Rui Ganhão Carlos Assis Rui Rebelo Maria Filomena Magalhães Maria Manuel Gil Leonel Serrano Gordo 2022-02-01T00:00:00Z https://doi.org/10.3390/fishes7010052 https://doaj.org/article/d889f48fd1e24ea893e7592e3ba274d1 EN eng MDPI AG https://www.mdpi.com/2410-3888/7/1/52 https://doaj.org/toc/2410-3888 doi:10.3390/fishes7010052 2410-3888 https://doaj.org/article/d889f48fd1e24ea893e7592e3ba274d1 Fishes, Vol 7, Iss 52, p 52 (2022) Bayesian Carangidae fisheries mortality Biology (General) QH301-705.5 Genetics QH426-470 article 2022 ftdoajarticles https://doi.org/10.3390/fishes7010052 2022-12-31T09:46:15Z Growth modelling is essential to inform fisheries management but is often hampered by sampling biases and imperfect data. Additional methods such as interpolating data through back-calculation may be used to account for sampling bias but are often complex and time-consuming. Here, we present an approach to improve plausibility in growth estimates when small individuals are under-sampled, based on Bayesian fitting growth models using Markov Chain Monte Carlo (MCMC) with informative priors on growth parameters. Focusing on the blue jack mackerel, Trachurus picturatus , which is an important commercial fish in the southern northeast Atlantic, this Bayesian approach was evaluated in relation to standard growth model fitting methods, using both direct readings and back-calculation data. Matched growth parameter estimates were obtained with the von Bertalanffy growth function applied to back-calculated length at age and the Bayesian fitting, using MCMC to direct age readings, with both outperforming all other methods assessed. These results indicate that Bayesian inference may be a powerful addition in growth modelling using imperfect data and should be considered further in age and growth studies, provided relevant biological information can be gathered and included in the analyses. Article in Journal/Newspaper Northeast Atlantic Directory of Open Access Journals: DOAJ Articles Fishes 7 1 52
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Bayesian
Carangidae
fisheries
mortality
Biology (General)
QH301-705.5
Genetics
QH426-470
spellingShingle Bayesian
Carangidae
fisheries
mortality
Biology (General)
QH301-705.5
Genetics
QH426-470
Ana Neves
Ana Rita Vieira
Vera Sequeira
Elisabete Silva
Frederica Silva
Ana Marta Duarte
Susana Mendes
Rui Ganhão
Carlos Assis
Rui Rebelo
Maria Filomena Magalhães
Maria Manuel Gil
Leonel Serrano Gordo
Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus
topic_facet Bayesian
Carangidae
fisheries
mortality
Biology (General)
QH301-705.5
Genetics
QH426-470
description Growth modelling is essential to inform fisheries management but is often hampered by sampling biases and imperfect data. Additional methods such as interpolating data through back-calculation may be used to account for sampling bias but are often complex and time-consuming. Here, we present an approach to improve plausibility in growth estimates when small individuals are under-sampled, based on Bayesian fitting growth models using Markov Chain Monte Carlo (MCMC) with informative priors on growth parameters. Focusing on the blue jack mackerel, Trachurus picturatus , which is an important commercial fish in the southern northeast Atlantic, this Bayesian approach was evaluated in relation to standard growth model fitting methods, using both direct readings and back-calculation data. Matched growth parameter estimates were obtained with the von Bertalanffy growth function applied to back-calculated length at age and the Bayesian fitting, using MCMC to direct age readings, with both outperforming all other methods assessed. These results indicate that Bayesian inference may be a powerful addition in growth modelling using imperfect data and should be considered further in age and growth studies, provided relevant biological information can be gathered and included in the analyses.
format Article in Journal/Newspaper
author Ana Neves
Ana Rita Vieira
Vera Sequeira
Elisabete Silva
Frederica Silva
Ana Marta Duarte
Susana Mendes
Rui Ganhão
Carlos Assis
Rui Rebelo
Maria Filomena Magalhães
Maria Manuel Gil
Leonel Serrano Gordo
author_facet Ana Neves
Ana Rita Vieira
Vera Sequeira
Elisabete Silva
Frederica Silva
Ana Marta Duarte
Susana Mendes
Rui Ganhão
Carlos Assis
Rui Rebelo
Maria Filomena Magalhães
Maria Manuel Gil
Leonel Serrano Gordo
author_sort Ana Neves
title Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus
title_short Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus
title_full Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus
title_fullStr Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus
title_full_unstemmed Modelling Fish Growth with Imperfect Data: The Case of Trachurus picturatus
title_sort modelling fish growth with imperfect data: the case of trachurus picturatus
publisher MDPI AG
publishDate 2022
url https://doi.org/10.3390/fishes7010052
https://doaj.org/article/d889f48fd1e24ea893e7592e3ba274d1
genre Northeast Atlantic
genre_facet Northeast Atlantic
op_source Fishes, Vol 7, Iss 52, p 52 (2022)
op_relation https://www.mdpi.com/2410-3888/7/1/52
https://doaj.org/toc/2410-3888
doi:10.3390/fishes7010052
2410-3888
https://doaj.org/article/d889f48fd1e24ea893e7592e3ba274d1
op_doi https://doi.org/10.3390/fishes7010052
container_title Fishes
container_volume 7
container_issue 1
container_start_page 52
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