Phylogeography of the veined squid, Loligo forbesii, in European waters
Abstract The veined squid, Loligo forbesii Steenstrup, 1856, occurs at the European Shelf areas including the Azores and represents a valuable resource for the European commercial fishery in the North East Atlantic. However, very little is known about its population structure and phylogeography. Thi...
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ftdoajarticles:oai:doaj.org/article:d77fe3dc9d1944b0a586b7966991a52b 2023-05-15T17:38:21+02:00 Phylogeography of the veined squid, Loligo forbesii, in European waters Anika Göpel Daniel Oesterwind Christopher Barrett Rita Cannas Luis Silva Caparro Pierluigi Carbonara Marilena Donnaloia Maria Cristina Follesa Angela Larivain Vladimir Laptikhovsky Evgenia Lefkaditou Jean-Paul Robin Maria Begoña Santos Ignacio Sobrino Julio Valeiras Maria Valls Hugo C. Vieira Kai Wieland Ralf Bastrop 2022-05-01T00:00:00Z https://doi.org/10.1038/s41598-022-11530-z https://doaj.org/article/d77fe3dc9d1944b0a586b7966991a52b EN eng Nature Portfolio https://doi.org/10.1038/s41598-022-11530-z https://doaj.org/toc/2045-2322 doi:10.1038/s41598-022-11530-z 2045-2322 https://doaj.org/article/d77fe3dc9d1944b0a586b7966991a52b Scientific Reports, Vol 12, Iss 1, Pp 1-10 (2022) Medicine R Science Q article 2022 ftdoajarticles https://doi.org/10.1038/s41598-022-11530-z 2022-12-30T21:45:51Z Abstract The veined squid, Loligo forbesii Steenstrup, 1856, occurs at the European Shelf areas including the Azores and represents a valuable resource for the European commercial fishery in the North East Atlantic. However, very little is known about its population structure and phylogeography. This lack of knowledge also impedes the development of sustainable fishery management for this species. The present study combined the use of two types of markers that retrieve patterns of gene flow in different time spans; the analysis of 16 nuclear microsatellites and sequencing of the mitochondrial cytochrome oxidase subunit I (COI). Whereas the high mutation rate of microsatellites allows the description of recent patterns of connectivity in species, the lower mutation rate of COI provides phylogeographic patterns on a longer timescale. A total of 347 individuals of L. forbesii were investigated from nearly the entire distribution range of the species, including the North East Atlantic Shelf, the Azores and the Mediterranean. Individuals from the Western and Eastern Mediterranean Sea have never been included in a genetic study before. We were able to analyse COI sequences from all 12 sampling areas and define three clades of L. forbesii. Due to our large sampling area, we are presenting 13 COI-haplotypes that were previously unknown. The microsatellite analysis does not include the Azores but three main clades could be identified at the remaining 11 sampling sites. Low FST values indicate gene flow over large geographical distances. However, the genetically significant differences and an additional slight grouping in the microsatellite structure reveal that geographical barriers seem to influence the population structure and reduce gene flow. Furthermore, both markers provide strong evidence that the observed phylogeographic pattern reflects the geographical history of the Azores and the Mediterranean Sea. Article in Journal/Newspaper North East Atlantic Directory of Open Access Journals: DOAJ Articles Scientific Reports 12 1 |
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Medicine R Science Q |
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Medicine R Science Q Anika Göpel Daniel Oesterwind Christopher Barrett Rita Cannas Luis Silva Caparro Pierluigi Carbonara Marilena Donnaloia Maria Cristina Follesa Angela Larivain Vladimir Laptikhovsky Evgenia Lefkaditou Jean-Paul Robin Maria Begoña Santos Ignacio Sobrino Julio Valeiras Maria Valls Hugo C. Vieira Kai Wieland Ralf Bastrop Phylogeography of the veined squid, Loligo forbesii, in European waters |
topic_facet |
Medicine R Science Q |
description |
Abstract The veined squid, Loligo forbesii Steenstrup, 1856, occurs at the European Shelf areas including the Azores and represents a valuable resource for the European commercial fishery in the North East Atlantic. However, very little is known about its population structure and phylogeography. This lack of knowledge also impedes the development of sustainable fishery management for this species. The present study combined the use of two types of markers that retrieve patterns of gene flow in different time spans; the analysis of 16 nuclear microsatellites and sequencing of the mitochondrial cytochrome oxidase subunit I (COI). Whereas the high mutation rate of microsatellites allows the description of recent patterns of connectivity in species, the lower mutation rate of COI provides phylogeographic patterns on a longer timescale. A total of 347 individuals of L. forbesii were investigated from nearly the entire distribution range of the species, including the North East Atlantic Shelf, the Azores and the Mediterranean. Individuals from the Western and Eastern Mediterranean Sea have never been included in a genetic study before. We were able to analyse COI sequences from all 12 sampling areas and define three clades of L. forbesii. Due to our large sampling area, we are presenting 13 COI-haplotypes that were previously unknown. The microsatellite analysis does not include the Azores but three main clades could be identified at the remaining 11 sampling sites. Low FST values indicate gene flow over large geographical distances. However, the genetically significant differences and an additional slight grouping in the microsatellite structure reveal that geographical barriers seem to influence the population structure and reduce gene flow. Furthermore, both markers provide strong evidence that the observed phylogeographic pattern reflects the geographical history of the Azores and the Mediterranean Sea. |
format |
Article in Journal/Newspaper |
author |
Anika Göpel Daniel Oesterwind Christopher Barrett Rita Cannas Luis Silva Caparro Pierluigi Carbonara Marilena Donnaloia Maria Cristina Follesa Angela Larivain Vladimir Laptikhovsky Evgenia Lefkaditou Jean-Paul Robin Maria Begoña Santos Ignacio Sobrino Julio Valeiras Maria Valls Hugo C. Vieira Kai Wieland Ralf Bastrop |
author_facet |
Anika Göpel Daniel Oesterwind Christopher Barrett Rita Cannas Luis Silva Caparro Pierluigi Carbonara Marilena Donnaloia Maria Cristina Follesa Angela Larivain Vladimir Laptikhovsky Evgenia Lefkaditou Jean-Paul Robin Maria Begoña Santos Ignacio Sobrino Julio Valeiras Maria Valls Hugo C. Vieira Kai Wieland Ralf Bastrop |
author_sort |
Anika Göpel |
title |
Phylogeography of the veined squid, Loligo forbesii, in European waters |
title_short |
Phylogeography of the veined squid, Loligo forbesii, in European waters |
title_full |
Phylogeography of the veined squid, Loligo forbesii, in European waters |
title_fullStr |
Phylogeography of the veined squid, Loligo forbesii, in European waters |
title_full_unstemmed |
Phylogeography of the veined squid, Loligo forbesii, in European waters |
title_sort |
phylogeography of the veined squid, loligo forbesii, in european waters |
publisher |
Nature Portfolio |
publishDate |
2022 |
url |
https://doi.org/10.1038/s41598-022-11530-z https://doaj.org/article/d77fe3dc9d1944b0a586b7966991a52b |
genre |
North East Atlantic |
genre_facet |
North East Atlantic |
op_source |
Scientific Reports, Vol 12, Iss 1, Pp 1-10 (2022) |
op_relation |
https://doi.org/10.1038/s41598-022-11530-z https://doaj.org/toc/2045-2322 doi:10.1038/s41598-022-11530-z 2045-2322 https://doaj.org/article/d77fe3dc9d1944b0a586b7966991a52b |
op_doi |
https://doi.org/10.1038/s41598-022-11530-z |
container_title |
Scientific Reports |
container_volume |
12 |
container_issue |
1 |
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1766138773653946368 |