Web-based virtual microscopy for parasitology: a novel tool for education and quality assurance.

BACKGROUND: The basis for correctly assessing the burden of parasitic infections and the effects of interventions relies on a somewhat shaky foundation as long as we do not know how reliable the reported laboratory findings are. Thus virtual microscopy, successfully introduced as a histopathology to...

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Published in:PLoS Neglected Tropical Diseases
Main Authors: Ewert Linder, Mikael Lundin, Cecilia Thors, Marianne Lebbad, Jadwiga Winiecka-Krusnell, Heikki Helin, Byron Leiva, Jorma Isola, Johan Lundin
Format: Article in Journal/Newspaper
Language:English
Published: Public Library of Science (PLoS) 2008
Subjects:
Online Access:https://doi.org/10.1371/journal.pntd.0000315
https://doaj.org/article/d6291fadda1b49feaea061a5f97b6d0a
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spelling ftdoajarticles:oai:doaj.org/article:d6291fadda1b49feaea061a5f97b6d0a 2023-05-15T15:15:18+02:00 Web-based virtual microscopy for parasitology: a novel tool for education and quality assurance. Ewert Linder Mikael Lundin Cecilia Thors Marianne Lebbad Jadwiga Winiecka-Krusnell Heikki Helin Byron Leiva Jorma Isola Johan Lundin 2008-01-01T00:00:00Z https://doi.org/10.1371/journal.pntd.0000315 https://doaj.org/article/d6291fadda1b49feaea061a5f97b6d0a EN eng Public Library of Science (PLoS) http://europepmc.org/articles/PMC2565642?pdf=render https://doaj.org/toc/1935-2727 https://doaj.org/toc/1935-2735 1935-2727 1935-2735 doi:10.1371/journal.pntd.0000315 https://doaj.org/article/d6291fadda1b49feaea061a5f97b6d0a PLoS Neglected Tropical Diseases, Vol 2, Iss 10, p e315 (2008) Arctic medicine. Tropical medicine RC955-962 Public aspects of medicine RA1-1270 article 2008 ftdoajarticles https://doi.org/10.1371/journal.pntd.0000315 2022-12-31T09:48:48Z BACKGROUND: The basis for correctly assessing the burden of parasitic infections and the effects of interventions relies on a somewhat shaky foundation as long as we do not know how reliable the reported laboratory findings are. Thus virtual microscopy, successfully introduced as a histopathology tool, has been adapted for medical parasitology. METHODOLOGY/PRINCIPAL FINDINGS: Specimens containing parasites in tissues, stools, and blood have been digitized and made accessible as a "webmicroscope for parasitology" (WMP) on the Internet (http://www.webmicroscope.net/parasitology).These digitized specimens can be viewed ("navigated" both in the x-axis and the y-axis) at the desired magnification by an unrestricted number of individuals simultaneously. For virtual microscopy of specimens containing stool parasites, it was necessary to develop the technique further in order to enable navigation in the z plane (i.e., "focusing"). Specimens were therefore scanned and photographed in two or more focal planes. The resulting digitized specimens consist of stacks of laterally "stiched" individual images covering the entire area of the sample photographed at high magnification. The digitized image information (approximately 10 GB uncompressed data per specimen) is accessible at data transfer speeds from 2 to 10 Mb/s via a network of five image servers located in different parts of Europe. Image streaming and rapid data transfer to an ordinary personal computer makes web-based virtual microscopy similar to conventional microscopy. CONCLUSION/SIGNIFICANCE: The potential of this novel technique in the field of medical parasitology to share identical parasitological specimens means that we can provide a "gold standard", which can overcome several problems encountered in quality control of diagnostic parasitology. Thus, the WMP may have an impact on the reliability of data, which constitute the basis for our understanding of the vast problem of neglected tropical diseases. The WMP can be used also in the absence of a fast ... Article in Journal/Newspaper Arctic Directory of Open Access Journals: DOAJ Articles Arctic The ''Y'' ENVELOPE(-112.453,-112.453,57.591,57.591) PLoS Neglected Tropical Diseases 2 10 e315
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Arctic medicine. Tropical medicine
RC955-962
Public aspects of medicine
RA1-1270
spellingShingle Arctic medicine. Tropical medicine
RC955-962
Public aspects of medicine
RA1-1270
Ewert Linder
Mikael Lundin
Cecilia Thors
Marianne Lebbad
Jadwiga Winiecka-Krusnell
Heikki Helin
Byron Leiva
Jorma Isola
Johan Lundin
Web-based virtual microscopy for parasitology: a novel tool for education and quality assurance.
topic_facet Arctic medicine. Tropical medicine
RC955-962
Public aspects of medicine
RA1-1270
description BACKGROUND: The basis for correctly assessing the burden of parasitic infections and the effects of interventions relies on a somewhat shaky foundation as long as we do not know how reliable the reported laboratory findings are. Thus virtual microscopy, successfully introduced as a histopathology tool, has been adapted for medical parasitology. METHODOLOGY/PRINCIPAL FINDINGS: Specimens containing parasites in tissues, stools, and blood have been digitized and made accessible as a "webmicroscope for parasitology" (WMP) on the Internet (http://www.webmicroscope.net/parasitology).These digitized specimens can be viewed ("navigated" both in the x-axis and the y-axis) at the desired magnification by an unrestricted number of individuals simultaneously. For virtual microscopy of specimens containing stool parasites, it was necessary to develop the technique further in order to enable navigation in the z plane (i.e., "focusing"). Specimens were therefore scanned and photographed in two or more focal planes. The resulting digitized specimens consist of stacks of laterally "stiched" individual images covering the entire area of the sample photographed at high magnification. The digitized image information (approximately 10 GB uncompressed data per specimen) is accessible at data transfer speeds from 2 to 10 Mb/s via a network of five image servers located in different parts of Europe. Image streaming and rapid data transfer to an ordinary personal computer makes web-based virtual microscopy similar to conventional microscopy. CONCLUSION/SIGNIFICANCE: The potential of this novel technique in the field of medical parasitology to share identical parasitological specimens means that we can provide a "gold standard", which can overcome several problems encountered in quality control of diagnostic parasitology. Thus, the WMP may have an impact on the reliability of data, which constitute the basis for our understanding of the vast problem of neglected tropical diseases. The WMP can be used also in the absence of a fast ...
format Article in Journal/Newspaper
author Ewert Linder
Mikael Lundin
Cecilia Thors
Marianne Lebbad
Jadwiga Winiecka-Krusnell
Heikki Helin
Byron Leiva
Jorma Isola
Johan Lundin
author_facet Ewert Linder
Mikael Lundin
Cecilia Thors
Marianne Lebbad
Jadwiga Winiecka-Krusnell
Heikki Helin
Byron Leiva
Jorma Isola
Johan Lundin
author_sort Ewert Linder
title Web-based virtual microscopy for parasitology: a novel tool for education and quality assurance.
title_short Web-based virtual microscopy for parasitology: a novel tool for education and quality assurance.
title_full Web-based virtual microscopy for parasitology: a novel tool for education and quality assurance.
title_fullStr Web-based virtual microscopy for parasitology: a novel tool for education and quality assurance.
title_full_unstemmed Web-based virtual microscopy for parasitology: a novel tool for education and quality assurance.
title_sort web-based virtual microscopy for parasitology: a novel tool for education and quality assurance.
publisher Public Library of Science (PLoS)
publishDate 2008
url https://doi.org/10.1371/journal.pntd.0000315
https://doaj.org/article/d6291fadda1b49feaea061a5f97b6d0a
long_lat ENVELOPE(-112.453,-112.453,57.591,57.591)
geographic Arctic
The ''Y''
geographic_facet Arctic
The ''Y''
genre Arctic
genre_facet Arctic
op_source PLoS Neglected Tropical Diseases, Vol 2, Iss 10, p e315 (2008)
op_relation http://europepmc.org/articles/PMC2565642?pdf=render
https://doaj.org/toc/1935-2727
https://doaj.org/toc/1935-2735
1935-2727
1935-2735
doi:10.1371/journal.pntd.0000315
https://doaj.org/article/d6291fadda1b49feaea061a5f97b6d0a
op_doi https://doi.org/10.1371/journal.pntd.0000315
container_title PLoS Neglected Tropical Diseases
container_volume 2
container_issue 10
container_start_page e315
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