Expanding population edge craniometrics and genetics provide insights into dispersal of commensal rats through Nusa Tenggara, Indonesia. In Papers in Honour of Ken Aplin, ed. Julien Louys, Sue O’Connor, and Kristofer M. Helgen

The Nusa Tenggara island chain consists of an archipelago that runs roughly east-west in eastern Indonesia. As part of Wallacea, it has never been connected to any continental landmass, and has been subject to a variety of biological invasions that have populated the islands. Here, we examine the cr...

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Published in:Records of the Australian Museum
Main Authors: Julien Louys, Michael B. Herrera, Vicki A. Thomson, Andrew S. Wiewel, Stephen C. Donnellan, Sue O'Connor, Ken Aplin
Format: Article in Journal/Newspaper
Language:English
Published: Australian Museum 2020
Subjects:
Online Access:https://doi.org/10.3853/j.2201-4349.72.2020.1730
https://doaj.org/article/d5499eadf1a2428ab3c3dc09e18afe93
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spelling ftdoajarticles:oai:doaj.org/article:d5499eadf1a2428ab3c3dc09e18afe93 2023-05-15T18:05:43+02:00 Expanding population edge craniometrics and genetics provide insights into dispersal of commensal rats through Nusa Tenggara, Indonesia. In Papers in Honour of Ken Aplin, ed. Julien Louys, Sue O’Connor, and Kristofer M. Helgen Julien Louys Michael B. Herrera Vicki A. Thomson Andrew S. Wiewel Stephen C. Donnellan Sue O'Connor Ken Aplin 2020-11-01T00:00:00Z https://doi.org/10.3853/j.2201-4349.72.2020.1730 https://doaj.org/article/d5499eadf1a2428ab3c3dc09e18afe93 EN eng Australian Museum https://doaj.org/toc/0067-1975 https://doaj.org/toc/2201-4349 doi:10.3853/j.2201-4349.72.2020.1730 0067-1975 2201-4349 https://doaj.org/article/d5499eadf1a2428ab3c3dc09e18afe93 Records of the Australian Museum, Vol 72, Iss 5, Pp 287-302 (2020) rattus black rat pacific rat ricefield rat dong son drum maritime exchange southeast asia Museums. Collectors and collecting AM1-501 Evolution QH359-425 article 2020 ftdoajarticles https://doi.org/10.3853/j.2201-4349.72.2020.1730 2022-12-30T21:39:32Z The Nusa Tenggara island chain consists of an archipelago that runs roughly east-west in eastern Indonesia. As part of Wallacea, it has never been connected to any continental landmass, and has been subject to a variety of biological invasions that have populated the islands. Here, we examine the craniometric and molecular genetic records of several species of Rattus sensu lato in the island chain. We use the predictions of expanding population edge phenotypic selection in an effort to understand the movement of Rattus rattus and Rattus exulans through the archipelago. We also examine the mitochondrial haplotype networks of R. argentiventer, R. exulans, and the R. rattus Complex (RrC) and microsatellite allele frequency clustering patterns for the RrC, to examine relationships within and between Nusa Tenggara populations, and those of Asia and the Pacific where relevant for each taxon. In the RrC LIV and RrC LII haplotype networks, 20 haplotypes with seven from Nusa Tenggara were observed for RrC LIV, and 100 haplotypes with seven from Nusa Tenggara observed for RrC LII. The top performing RrC craniometric model had a negative association between size and distance from the easternmost point of the samples from Nusa Tenggara, consistent with increasing size moving west to east. The cytochrome b network for the R. exulans sequences comprised 14 haplotypes, with three observed from mainland Southeast Asia, one shared with Nusa Tenggara and regions further east, and another haplotype observed in Nusa Tenggara and in the Pacific. The R. exulans craniometric model selection produced four equally well performing models, with no migration scenario preferred. Finally, the haplotype network of R. argentiventer comprised 10 haplotypes, with six observed in Nusa Tenggara, including a relatively early cluster from the east of the archipelago. Our results are compatible with a polyphasic and polydirectional invasion of Nusa Tenggara by Rattus, likely beginning with RrC from the west to the east, an expansion of R. exulans ... Article in Journal/Newspaper Rattus rattus Directory of Open Access Journals: DOAJ Articles Pacific Records of the Australian Museum 72 5 287 302
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic rattus
black rat
pacific rat
ricefield rat
dong son drum
maritime exchange
southeast asia
Museums. Collectors and collecting
AM1-501
Evolution
QH359-425
spellingShingle rattus
black rat
pacific rat
ricefield rat
dong son drum
maritime exchange
southeast asia
Museums. Collectors and collecting
AM1-501
Evolution
QH359-425
Julien Louys
Michael B. Herrera
Vicki A. Thomson
Andrew S. Wiewel
Stephen C. Donnellan
Sue O'Connor
Ken Aplin
Expanding population edge craniometrics and genetics provide insights into dispersal of commensal rats through Nusa Tenggara, Indonesia. In Papers in Honour of Ken Aplin, ed. Julien Louys, Sue O’Connor, and Kristofer M. Helgen
topic_facet rattus
black rat
pacific rat
ricefield rat
dong son drum
maritime exchange
southeast asia
Museums. Collectors and collecting
AM1-501
Evolution
QH359-425
description The Nusa Tenggara island chain consists of an archipelago that runs roughly east-west in eastern Indonesia. As part of Wallacea, it has never been connected to any continental landmass, and has been subject to a variety of biological invasions that have populated the islands. Here, we examine the craniometric and molecular genetic records of several species of Rattus sensu lato in the island chain. We use the predictions of expanding population edge phenotypic selection in an effort to understand the movement of Rattus rattus and Rattus exulans through the archipelago. We also examine the mitochondrial haplotype networks of R. argentiventer, R. exulans, and the R. rattus Complex (RrC) and microsatellite allele frequency clustering patterns for the RrC, to examine relationships within and between Nusa Tenggara populations, and those of Asia and the Pacific where relevant for each taxon. In the RrC LIV and RrC LII haplotype networks, 20 haplotypes with seven from Nusa Tenggara were observed for RrC LIV, and 100 haplotypes with seven from Nusa Tenggara observed for RrC LII. The top performing RrC craniometric model had a negative association between size and distance from the easternmost point of the samples from Nusa Tenggara, consistent with increasing size moving west to east. The cytochrome b network for the R. exulans sequences comprised 14 haplotypes, with three observed from mainland Southeast Asia, one shared with Nusa Tenggara and regions further east, and another haplotype observed in Nusa Tenggara and in the Pacific. The R. exulans craniometric model selection produced four equally well performing models, with no migration scenario preferred. Finally, the haplotype network of R. argentiventer comprised 10 haplotypes, with six observed in Nusa Tenggara, including a relatively early cluster from the east of the archipelago. Our results are compatible with a polyphasic and polydirectional invasion of Nusa Tenggara by Rattus, likely beginning with RrC from the west to the east, an expansion of R. exulans ...
format Article in Journal/Newspaper
author Julien Louys
Michael B. Herrera
Vicki A. Thomson
Andrew S. Wiewel
Stephen C. Donnellan
Sue O'Connor
Ken Aplin
author_facet Julien Louys
Michael B. Herrera
Vicki A. Thomson
Andrew S. Wiewel
Stephen C. Donnellan
Sue O'Connor
Ken Aplin
author_sort Julien Louys
title Expanding population edge craniometrics and genetics provide insights into dispersal of commensal rats through Nusa Tenggara, Indonesia. In Papers in Honour of Ken Aplin, ed. Julien Louys, Sue O’Connor, and Kristofer M. Helgen
title_short Expanding population edge craniometrics and genetics provide insights into dispersal of commensal rats through Nusa Tenggara, Indonesia. In Papers in Honour of Ken Aplin, ed. Julien Louys, Sue O’Connor, and Kristofer M. Helgen
title_full Expanding population edge craniometrics and genetics provide insights into dispersal of commensal rats through Nusa Tenggara, Indonesia. In Papers in Honour of Ken Aplin, ed. Julien Louys, Sue O’Connor, and Kristofer M. Helgen
title_fullStr Expanding population edge craniometrics and genetics provide insights into dispersal of commensal rats through Nusa Tenggara, Indonesia. In Papers in Honour of Ken Aplin, ed. Julien Louys, Sue O’Connor, and Kristofer M. Helgen
title_full_unstemmed Expanding population edge craniometrics and genetics provide insights into dispersal of commensal rats through Nusa Tenggara, Indonesia. In Papers in Honour of Ken Aplin, ed. Julien Louys, Sue O’Connor, and Kristofer M. Helgen
title_sort expanding population edge craniometrics and genetics provide insights into dispersal of commensal rats through nusa tenggara, indonesia. in papers in honour of ken aplin, ed. julien louys, sue o’connor, and kristofer m. helgen
publisher Australian Museum
publishDate 2020
url https://doi.org/10.3853/j.2201-4349.72.2020.1730
https://doaj.org/article/d5499eadf1a2428ab3c3dc09e18afe93
geographic Pacific
geographic_facet Pacific
genre Rattus rattus
genre_facet Rattus rattus
op_source Records of the Australian Museum, Vol 72, Iss 5, Pp 287-302 (2020)
op_relation https://doaj.org/toc/0067-1975
https://doaj.org/toc/2201-4349
doi:10.3853/j.2201-4349.72.2020.1730
0067-1975
2201-4349
https://doaj.org/article/d5499eadf1a2428ab3c3dc09e18afe93
op_doi https://doi.org/10.3853/j.2201-4349.72.2020.1730
container_title Records of the Australian Museum
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