The marine viromes of four oceanic regions.

Viruses are the most common biological entities in the marine environment. There has not been a global survey of these viruses, and consequently, it is not known what types of viruses are in Earth's oceans or how they are distributed. Metagenomic analyses of 184 viral assemblages collected over...

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Published in:PLoS Biology
Main Authors: Florent E Angly, Ben Felts, Mya Breitbart, Peter Salamon, Robert A Edwards, Craig Carlson, Amy M Chan, Matthew Haynes, Scott Kelley, Hong Liu, Joseph M Mahaffy, Jennifer E Mueller, Jim Nulton, Robert Olson, Rachel Parsons, Steve Rayhawk, Curtis A Suttle, Forest Rohwer
Format: Article in Journal/Newspaper
Language:English
Published: Public Library of Science (PLoS) 2006
Subjects:
Online Access:https://doi.org/10.1371/journal.pbio.0040368
https://doaj.org/article/d2374d0af46a4ca98aad9db048735b71
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spelling ftdoajarticles:oai:doaj.org/article:d2374d0af46a4ca98aad9db048735b71 2023-05-15T15:07:14+02:00 The marine viromes of four oceanic regions. Florent E Angly Ben Felts Mya Breitbart Peter Salamon Robert A Edwards Craig Carlson Amy M Chan Matthew Haynes Scott Kelley Hong Liu Joseph M Mahaffy Jennifer E Mueller Jim Nulton Robert Olson Rachel Parsons Steve Rayhawk Curtis A Suttle Forest Rohwer 2006-11-01T00:00:00Z https://doi.org/10.1371/journal.pbio.0040368 https://doaj.org/article/d2374d0af46a4ca98aad9db048735b71 EN eng Public Library of Science (PLoS) https://doi.org/10.1371/journal.pbio.0040368 https://doaj.org/toc/1544-9173 https://doaj.org/toc/1545-7885 1544-9173 1545-7885 doi:10.1371/journal.pbio.0040368 https://doaj.org/article/d2374d0af46a4ca98aad9db048735b71 PLoS Biology, Vol 4, Iss 11, p e368 (2006) Biology (General) QH301-705.5 article 2006 ftdoajarticles https://doi.org/10.1371/journal.pbio.0040368 2022-12-31T11:48:27Z Viruses are the most common biological entities in the marine environment. There has not been a global survey of these viruses, and consequently, it is not known what types of viruses are in Earth's oceans or how they are distributed. Metagenomic analyses of 184 viral assemblages collected over a decade and representing 68 sites in four major oceanic regions showed that most of the viral sequences were not similar to those in the current databases. There was a distinct "marine-ness" quality to the viral assemblages. Global diversity was very high, presumably several hundred thousand of species, and regional richness varied on a North-South latitudinal gradient. The marine regions had different assemblages of viruses. Cyanophages and a newly discovered clade of single-stranded DNA phages dominated the Sargasso Sea sample, whereas prophage-like sequences were most common in the Arctic. However most viral species were found to be widespread. With a majority of shared species between oceanic regions, most of the differences between viral assemblages seemed to be explained by variation in the occurrence of the most common viral species and not by exclusion of different viral genomes. These results support the idea that viruses are widely dispersed and that local environmental conditions enrich for certain viral types through selective pressure. Article in Journal/Newspaper Arctic Directory of Open Access Journals: DOAJ Articles Arctic PLoS Biology 4 11 e368
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Biology (General)
QH301-705.5
spellingShingle Biology (General)
QH301-705.5
Florent E Angly
Ben Felts
Mya Breitbart
Peter Salamon
Robert A Edwards
Craig Carlson
Amy M Chan
Matthew Haynes
Scott Kelley
Hong Liu
Joseph M Mahaffy
Jennifer E Mueller
Jim Nulton
Robert Olson
Rachel Parsons
Steve Rayhawk
Curtis A Suttle
Forest Rohwer
The marine viromes of four oceanic regions.
topic_facet Biology (General)
QH301-705.5
description Viruses are the most common biological entities in the marine environment. There has not been a global survey of these viruses, and consequently, it is not known what types of viruses are in Earth's oceans or how they are distributed. Metagenomic analyses of 184 viral assemblages collected over a decade and representing 68 sites in four major oceanic regions showed that most of the viral sequences were not similar to those in the current databases. There was a distinct "marine-ness" quality to the viral assemblages. Global diversity was very high, presumably several hundred thousand of species, and regional richness varied on a North-South latitudinal gradient. The marine regions had different assemblages of viruses. Cyanophages and a newly discovered clade of single-stranded DNA phages dominated the Sargasso Sea sample, whereas prophage-like sequences were most common in the Arctic. However most viral species were found to be widespread. With a majority of shared species between oceanic regions, most of the differences between viral assemblages seemed to be explained by variation in the occurrence of the most common viral species and not by exclusion of different viral genomes. These results support the idea that viruses are widely dispersed and that local environmental conditions enrich for certain viral types through selective pressure.
format Article in Journal/Newspaper
author Florent E Angly
Ben Felts
Mya Breitbart
Peter Salamon
Robert A Edwards
Craig Carlson
Amy M Chan
Matthew Haynes
Scott Kelley
Hong Liu
Joseph M Mahaffy
Jennifer E Mueller
Jim Nulton
Robert Olson
Rachel Parsons
Steve Rayhawk
Curtis A Suttle
Forest Rohwer
author_facet Florent E Angly
Ben Felts
Mya Breitbart
Peter Salamon
Robert A Edwards
Craig Carlson
Amy M Chan
Matthew Haynes
Scott Kelley
Hong Liu
Joseph M Mahaffy
Jennifer E Mueller
Jim Nulton
Robert Olson
Rachel Parsons
Steve Rayhawk
Curtis A Suttle
Forest Rohwer
author_sort Florent E Angly
title The marine viromes of four oceanic regions.
title_short The marine viromes of four oceanic regions.
title_full The marine viromes of four oceanic regions.
title_fullStr The marine viromes of four oceanic regions.
title_full_unstemmed The marine viromes of four oceanic regions.
title_sort marine viromes of four oceanic regions.
publisher Public Library of Science (PLoS)
publishDate 2006
url https://doi.org/10.1371/journal.pbio.0040368
https://doaj.org/article/d2374d0af46a4ca98aad9db048735b71
geographic Arctic
geographic_facet Arctic
genre Arctic
genre_facet Arctic
op_source PLoS Biology, Vol 4, Iss 11, p e368 (2006)
op_relation https://doi.org/10.1371/journal.pbio.0040368
https://doaj.org/toc/1544-9173
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1545-7885
doi:10.1371/journal.pbio.0040368
https://doaj.org/article/d2374d0af46a4ca98aad9db048735b71
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container_title PLoS Biology
container_volume 4
container_issue 11
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