Diversity in a Cold Hot-Spot: DNA-Barcoding Reveals Patterns of Evolution among Antarctic Demosponges (Class Demospongiae, Phylum Porifera).
The approximately 350 demosponge species that have been described from Antarctica represent a faunistic component distinct from that of neighboring regions. Sponges provide structure to the Antarctic benthos and refuge to other invertebrates, and can be dominant in some communities. Despite the impo...
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ftdoajarticles:oai:doaj.org/article:d10823d5f57f42969f8480f4d28b4f18 2023-05-15T13:48:41+02:00 Diversity in a Cold Hot-Spot: DNA-Barcoding Reveals Patterns of Evolution among Antarctic Demosponges (Class Demospongiae, Phylum Porifera). Sergio Vargas Michelle Kelly Kareen Schnabel Sadie Mills David Bowden Gert Wörheide 2015-01-01T00:00:00Z https://doi.org/10.1371/journal.pone.0127573 https://doaj.org/article/d10823d5f57f42969f8480f4d28b4f18 EN eng Public Library of Science (PLoS) http://europepmc.org/articles/PMC4474727?pdf=render https://doaj.org/toc/1932-6203 1932-6203 doi:10.1371/journal.pone.0127573 https://doaj.org/article/d10823d5f57f42969f8480f4d28b4f18 PLoS ONE, Vol 10, Iss 6, p e0127573 (2015) Medicine R Science Q article 2015 ftdoajarticles https://doi.org/10.1371/journal.pone.0127573 2022-12-31T13:31:57Z The approximately 350 demosponge species that have been described from Antarctica represent a faunistic component distinct from that of neighboring regions. Sponges provide structure to the Antarctic benthos and refuge to other invertebrates, and can be dominant in some communities. Despite the importance of sponges in the Antarctic subtidal environment, sponge DNA barcodes are scarce but can provide insight into the evolutionary relationships of this unique biogeographic province.We sequenced the standard barcoding COI region for a comprehensive selection of sponges collected during expeditions to the Ross Sea region in 2004 and 2008, and produced DNA-barcodes for 53 demosponge species covering about 60% of the species collected. The Antarctic sponge communities are phylogenetically diverse, matching the diversity of well-sampled sponge communities in the Lusitanic and Mediterranean marine provinces in the Temperate Northern Atlantic for which molecular data are readily available. Additionally, DNA-barcoding revealed levels of in situ molecular evolution comparable to those present among Caribbean sponges. DNA-barcoding using the Segregating Sites Algorithm correctly assigned approximately 54% of the barcoded species to the morphologically determined species.A barcode library for Antarctic sponges was assembled and used to advance the systematic and evolutionary research of Antarctic sponges. We provide insights on the evolutionary forces shaping Antarctica's diverse sponge communities, and a barcode library against which future sequence data from other regions or depth strata of Antarctica can be compared. The opportunity for rapid taxonomic identification of sponge collections for ecological research is now at the horizon. Article in Journal/Newspaper Antarc* Antarctic Antarctica Ross Sea Directory of Open Access Journals: DOAJ Articles Antarctic Ross Sea The Antarctic PLOS ONE 10 6 e0127573 |
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English |
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Medicine R Science Q |
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Medicine R Science Q Sergio Vargas Michelle Kelly Kareen Schnabel Sadie Mills David Bowden Gert Wörheide Diversity in a Cold Hot-Spot: DNA-Barcoding Reveals Patterns of Evolution among Antarctic Demosponges (Class Demospongiae, Phylum Porifera). |
topic_facet |
Medicine R Science Q |
description |
The approximately 350 demosponge species that have been described from Antarctica represent a faunistic component distinct from that of neighboring regions. Sponges provide structure to the Antarctic benthos and refuge to other invertebrates, and can be dominant in some communities. Despite the importance of sponges in the Antarctic subtidal environment, sponge DNA barcodes are scarce but can provide insight into the evolutionary relationships of this unique biogeographic province.We sequenced the standard barcoding COI region for a comprehensive selection of sponges collected during expeditions to the Ross Sea region in 2004 and 2008, and produced DNA-barcodes for 53 demosponge species covering about 60% of the species collected. The Antarctic sponge communities are phylogenetically diverse, matching the diversity of well-sampled sponge communities in the Lusitanic and Mediterranean marine provinces in the Temperate Northern Atlantic for which molecular data are readily available. Additionally, DNA-barcoding revealed levels of in situ molecular evolution comparable to those present among Caribbean sponges. DNA-barcoding using the Segregating Sites Algorithm correctly assigned approximately 54% of the barcoded species to the morphologically determined species.A barcode library for Antarctic sponges was assembled and used to advance the systematic and evolutionary research of Antarctic sponges. We provide insights on the evolutionary forces shaping Antarctica's diverse sponge communities, and a barcode library against which future sequence data from other regions or depth strata of Antarctica can be compared. The opportunity for rapid taxonomic identification of sponge collections for ecological research is now at the horizon. |
format |
Article in Journal/Newspaper |
author |
Sergio Vargas Michelle Kelly Kareen Schnabel Sadie Mills David Bowden Gert Wörheide |
author_facet |
Sergio Vargas Michelle Kelly Kareen Schnabel Sadie Mills David Bowden Gert Wörheide |
author_sort |
Sergio Vargas |
title |
Diversity in a Cold Hot-Spot: DNA-Barcoding Reveals Patterns of Evolution among Antarctic Demosponges (Class Demospongiae, Phylum Porifera). |
title_short |
Diversity in a Cold Hot-Spot: DNA-Barcoding Reveals Patterns of Evolution among Antarctic Demosponges (Class Demospongiae, Phylum Porifera). |
title_full |
Diversity in a Cold Hot-Spot: DNA-Barcoding Reveals Patterns of Evolution among Antarctic Demosponges (Class Demospongiae, Phylum Porifera). |
title_fullStr |
Diversity in a Cold Hot-Spot: DNA-Barcoding Reveals Patterns of Evolution among Antarctic Demosponges (Class Demospongiae, Phylum Porifera). |
title_full_unstemmed |
Diversity in a Cold Hot-Spot: DNA-Barcoding Reveals Patterns of Evolution among Antarctic Demosponges (Class Demospongiae, Phylum Porifera). |
title_sort |
diversity in a cold hot-spot: dna-barcoding reveals patterns of evolution among antarctic demosponges (class demospongiae, phylum porifera). |
publisher |
Public Library of Science (PLoS) |
publishDate |
2015 |
url |
https://doi.org/10.1371/journal.pone.0127573 https://doaj.org/article/d10823d5f57f42969f8480f4d28b4f18 |
geographic |
Antarctic Ross Sea The Antarctic |
geographic_facet |
Antarctic Ross Sea The Antarctic |
genre |
Antarc* Antarctic Antarctica Ross Sea |
genre_facet |
Antarc* Antarctic Antarctica Ross Sea |
op_source |
PLoS ONE, Vol 10, Iss 6, p e0127573 (2015) |
op_relation |
http://europepmc.org/articles/PMC4474727?pdf=render https://doaj.org/toc/1932-6203 1932-6203 doi:10.1371/journal.pone.0127573 https://doaj.org/article/d10823d5f57f42969f8480f4d28b4f18 |
op_doi |
https://doi.org/10.1371/journal.pone.0127573 |
container_title |
PLOS ONE |
container_volume |
10 |
container_issue |
6 |
container_start_page |
e0127573 |
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1766249585063231488 |