Spatial and temporal conversion of nitrogen using Arthrobacter sp. 24S4–2, a strain obtained from Antarctica

According to average nucleotide identity (ANI) analysis of the complete genomes, strain 24S4–2 isolated from Antarctica is considered as a potential novel Arthrobacter species. Arthrobacter sp. 24S4–2 could grow and produce ammonium in nitrate or nitrite or even nitrogen free medium. Strain 24S4–2 w...

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Published in:Frontiers in Microbiology
Main Authors: Yixuan Liu, Yumin Zhang, Yudi Huang, Jingjing Niu, Jun Huang, Xiaoya Peng, Fang Peng
Format: Article in Journal/Newspaper
Language:English
Published: Frontiers Media S.A. 2023
Subjects:
Online Access:https://doi.org/10.3389/fmicb.2023.1040201
https://doaj.org/article/d0126a913a194eac9985cfdc1e1adcbb
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spelling ftdoajarticles:oai:doaj.org/article:d0126a913a194eac9985cfdc1e1adcbb 2023-05-15T13:32:38+02:00 Spatial and temporal conversion of nitrogen using Arthrobacter sp. 24S4–2, a strain obtained from Antarctica Yixuan Liu Yumin Zhang Yudi Huang Jingjing Niu Jun Huang Xiaoya Peng Fang Peng 2023-02-01T00:00:00Z https://doi.org/10.3389/fmicb.2023.1040201 https://doaj.org/article/d0126a913a194eac9985cfdc1e1adcbb EN eng Frontiers Media S.A. https://www.frontiersin.org/articles/10.3389/fmicb.2023.1040201/full https://doaj.org/toc/1664-302X 1664-302X doi:10.3389/fmicb.2023.1040201 https://doaj.org/article/d0126a913a194eac9985cfdc1e1adcbb Frontiers in Microbiology, Vol 14 (2023) Arthrobacter aerobic DNRA nitrogen storage vesicle structure spatial and temporal transformation of nitrogen Antarctica Microbiology QR1-502 article 2023 ftdoajarticles https://doi.org/10.3389/fmicb.2023.1040201 2023-02-19T01:45:44Z According to average nucleotide identity (ANI) analysis of the complete genomes, strain 24S4–2 isolated from Antarctica is considered as a potential novel Arthrobacter species. Arthrobacter sp. 24S4–2 could grow and produce ammonium in nitrate or nitrite or even nitrogen free medium. Strain 24S4–2 was discovered to accumulate nitrate/nitrite and subsequently convert nitrate to nitrite intracellularly when incubated in a nitrate/nitrite medium. In nitrogen-free medium, strain 24S4–2 not only reduced the accumulated nitrite for growth, but also secreted ammonia to the extracellular under aerobic condition, which was thought to be linked to nitrite reductase genes nirB, nirD, and nasA by the transcriptome and RT-qPCR analysis. A membrane-like vesicle structure was detected in the cell of strain 24S4–2 by transmission electron microscopy, which was thought to be the site of intracellular nitrogen supply accumulation and conversion. This spatial and temporal conversion process of nitrogen source helps the strain maintain development in the absence of nitrogen supply or a harsh environment, which is part of its adaption strategy to the Antarctic environment. This process may also play an important ecological role, that other bacteria in the environment would benefit from its extracellular nitrogen source secretion and nitrite consumption characteristics. Article in Journal/Newspaper Antarc* Antarctic Antarctica Directory of Open Access Journals: DOAJ Articles Antarctic The Antarctic Frontiers in Microbiology 14
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Arthrobacter
aerobic DNRA
nitrogen storage
vesicle structure
spatial and temporal transformation of nitrogen
Antarctica
Microbiology
QR1-502
spellingShingle Arthrobacter
aerobic DNRA
nitrogen storage
vesicle structure
spatial and temporal transformation of nitrogen
Antarctica
Microbiology
QR1-502
Yixuan Liu
Yumin Zhang
Yudi Huang
Jingjing Niu
Jun Huang
Xiaoya Peng
Fang Peng
Spatial and temporal conversion of nitrogen using Arthrobacter sp. 24S4–2, a strain obtained from Antarctica
topic_facet Arthrobacter
aerobic DNRA
nitrogen storage
vesicle structure
spatial and temporal transformation of nitrogen
Antarctica
Microbiology
QR1-502
description According to average nucleotide identity (ANI) analysis of the complete genomes, strain 24S4–2 isolated from Antarctica is considered as a potential novel Arthrobacter species. Arthrobacter sp. 24S4–2 could grow and produce ammonium in nitrate or nitrite or even nitrogen free medium. Strain 24S4–2 was discovered to accumulate nitrate/nitrite and subsequently convert nitrate to nitrite intracellularly when incubated in a nitrate/nitrite medium. In nitrogen-free medium, strain 24S4–2 not only reduced the accumulated nitrite for growth, but also secreted ammonia to the extracellular under aerobic condition, which was thought to be linked to nitrite reductase genes nirB, nirD, and nasA by the transcriptome and RT-qPCR analysis. A membrane-like vesicle structure was detected in the cell of strain 24S4–2 by transmission electron microscopy, which was thought to be the site of intracellular nitrogen supply accumulation and conversion. This spatial and temporal conversion process of nitrogen source helps the strain maintain development in the absence of nitrogen supply or a harsh environment, which is part of its adaption strategy to the Antarctic environment. This process may also play an important ecological role, that other bacteria in the environment would benefit from its extracellular nitrogen source secretion and nitrite consumption characteristics.
format Article in Journal/Newspaper
author Yixuan Liu
Yumin Zhang
Yudi Huang
Jingjing Niu
Jun Huang
Xiaoya Peng
Fang Peng
author_facet Yixuan Liu
Yumin Zhang
Yudi Huang
Jingjing Niu
Jun Huang
Xiaoya Peng
Fang Peng
author_sort Yixuan Liu
title Spatial and temporal conversion of nitrogen using Arthrobacter sp. 24S4–2, a strain obtained from Antarctica
title_short Spatial and temporal conversion of nitrogen using Arthrobacter sp. 24S4–2, a strain obtained from Antarctica
title_full Spatial and temporal conversion of nitrogen using Arthrobacter sp. 24S4–2, a strain obtained from Antarctica
title_fullStr Spatial and temporal conversion of nitrogen using Arthrobacter sp. 24S4–2, a strain obtained from Antarctica
title_full_unstemmed Spatial and temporal conversion of nitrogen using Arthrobacter sp. 24S4–2, a strain obtained from Antarctica
title_sort spatial and temporal conversion of nitrogen using arthrobacter sp. 24s4–2, a strain obtained from antarctica
publisher Frontiers Media S.A.
publishDate 2023
url https://doi.org/10.3389/fmicb.2023.1040201
https://doaj.org/article/d0126a913a194eac9985cfdc1e1adcbb
geographic Antarctic
The Antarctic
geographic_facet Antarctic
The Antarctic
genre Antarc*
Antarctic
Antarctica
genre_facet Antarc*
Antarctic
Antarctica
op_source Frontiers in Microbiology, Vol 14 (2023)
op_relation https://www.frontiersin.org/articles/10.3389/fmicb.2023.1040201/full
https://doaj.org/toc/1664-302X
1664-302X
doi:10.3389/fmicb.2023.1040201
https://doaj.org/article/d0126a913a194eac9985cfdc1e1adcbb
op_doi https://doi.org/10.3389/fmicb.2023.1040201
container_title Frontiers in Microbiology
container_volume 14
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