Uniting statistical and individual-based approaches for animal movement modelling.

The dynamic nature of their internal states and the environment directly shape animals' spatial behaviours and give rise to emergent properties at broader scales in natural systems. However, integrating these dynamic features into habitat selection studies remains challenging, due to practicall...

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Published in:PLoS ONE
Main Authors: Guillaume Latombe, Lael Parrott, Mathieu Basille, Daniel Fortin
Format: Article in Journal/Newspaper
Language:English
Published: Public Library of Science (PLoS) 2014
Subjects:
R
Q
Online Access:https://doi.org/10.1371/journal.pone.0099938
https://doaj.org/article/cfe7b8a873e54bdca0b1f9905eb23ea0
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spelling ftdoajarticles:oai:doaj.org/article:cfe7b8a873e54bdca0b1f9905eb23ea0 2023-05-15T15:53:31+02:00 Uniting statistical and individual-based approaches for animal movement modelling. Guillaume Latombe Lael Parrott Mathieu Basille Daniel Fortin 2014-01-01T00:00:00Z https://doi.org/10.1371/journal.pone.0099938 https://doaj.org/article/cfe7b8a873e54bdca0b1f9905eb23ea0 EN eng Public Library of Science (PLoS) http://europepmc.org/articles/PMC4076191?pdf=render https://doaj.org/toc/1932-6203 1932-6203 doi:10.1371/journal.pone.0099938 https://doaj.org/article/cfe7b8a873e54bdca0b1f9905eb23ea0 PLoS ONE, Vol 9, Iss 6, p e99938 (2014) Medicine R Science Q article 2014 ftdoajarticles https://doi.org/10.1371/journal.pone.0099938 2022-12-31T06:30:27Z The dynamic nature of their internal states and the environment directly shape animals' spatial behaviours and give rise to emergent properties at broader scales in natural systems. However, integrating these dynamic features into habitat selection studies remains challenging, due to practically impossible field work to access internal states and the inability of current statistical models to produce dynamic outputs. To address these issues, we developed a robust method, which combines statistical and individual-based modelling. Using a statistical technique for forward modelling of the IBM has the advantage of being faster for parameterization than a pure inverse modelling technique and allows for robust selection of parameters. Using GPS locations from caribou monitored in Québec, caribou movements were modelled based on generative mechanisms accounting for dynamic variables at a low level of emergence. These variables were accessed by replicating real individuals' movements in parallel sub-models, and movement parameters were then empirically parameterized using Step Selection Functions. The final IBM model was validated using both k-fold cross-validation and emergent patterns validation and was tested for two different scenarios, with varying hardwood encroachment. Our results highlighted a functional response in habitat selection, which suggests that our method was able to capture the complexity of the natural system, and adequately provided projections on future possible states of the system in response to different management plans. This is especially relevant for testing the long-term impact of scenarios corresponding to environmental configurations that have yet to be observed in real systems. Article in Journal/Newspaper caribou Directory of Open Access Journals: DOAJ Articles PLoS ONE 9 6 e99938
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Medicine
R
Science
Q
spellingShingle Medicine
R
Science
Q
Guillaume Latombe
Lael Parrott
Mathieu Basille
Daniel Fortin
Uniting statistical and individual-based approaches for animal movement modelling.
topic_facet Medicine
R
Science
Q
description The dynamic nature of their internal states and the environment directly shape animals' spatial behaviours and give rise to emergent properties at broader scales in natural systems. However, integrating these dynamic features into habitat selection studies remains challenging, due to practically impossible field work to access internal states and the inability of current statistical models to produce dynamic outputs. To address these issues, we developed a robust method, which combines statistical and individual-based modelling. Using a statistical technique for forward modelling of the IBM has the advantage of being faster for parameterization than a pure inverse modelling technique and allows for robust selection of parameters. Using GPS locations from caribou monitored in Québec, caribou movements were modelled based on generative mechanisms accounting for dynamic variables at a low level of emergence. These variables were accessed by replicating real individuals' movements in parallel sub-models, and movement parameters were then empirically parameterized using Step Selection Functions. The final IBM model was validated using both k-fold cross-validation and emergent patterns validation and was tested for two different scenarios, with varying hardwood encroachment. Our results highlighted a functional response in habitat selection, which suggests that our method was able to capture the complexity of the natural system, and adequately provided projections on future possible states of the system in response to different management plans. This is especially relevant for testing the long-term impact of scenarios corresponding to environmental configurations that have yet to be observed in real systems.
format Article in Journal/Newspaper
author Guillaume Latombe
Lael Parrott
Mathieu Basille
Daniel Fortin
author_facet Guillaume Latombe
Lael Parrott
Mathieu Basille
Daniel Fortin
author_sort Guillaume Latombe
title Uniting statistical and individual-based approaches for animal movement modelling.
title_short Uniting statistical and individual-based approaches for animal movement modelling.
title_full Uniting statistical and individual-based approaches for animal movement modelling.
title_fullStr Uniting statistical and individual-based approaches for animal movement modelling.
title_full_unstemmed Uniting statistical and individual-based approaches for animal movement modelling.
title_sort uniting statistical and individual-based approaches for animal movement modelling.
publisher Public Library of Science (PLoS)
publishDate 2014
url https://doi.org/10.1371/journal.pone.0099938
https://doaj.org/article/cfe7b8a873e54bdca0b1f9905eb23ea0
genre caribou
genre_facet caribou
op_source PLoS ONE, Vol 9, Iss 6, p e99938 (2014)
op_relation http://europepmc.org/articles/PMC4076191?pdf=render
https://doaj.org/toc/1932-6203
1932-6203
doi:10.1371/journal.pone.0099938
https://doaj.org/article/cfe7b8a873e54bdca0b1f9905eb23ea0
op_doi https://doi.org/10.1371/journal.pone.0099938
container_title PLoS ONE
container_volume 9
container_issue 6
container_start_page e99938
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