Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially?
A wide range of microorganisms inhabit biocrusts of arctic and sub-arctic regions. These taxa live and thrive under extreme conditions and, moreover, play important roles in biogeochemical cycling. Nevertheless, their diversity and abundance remain ambiguous. Here, we studied microbial community com...
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ftdoajarticles:oai:doaj.org/article:cf2b5361aa8b4b13b1e6accd8998fef2 2023-05-15T14:56:12+02:00 Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially? Ekaterina Pushkareva Josef Elster Andreas Holzinger Sarina Niedzwiedz Burkhard Becker 2022-12-01T00:00:00Z https://doi.org/10.3389/fmicb.2022.1048522 https://doaj.org/article/cf2b5361aa8b4b13b1e6accd8998fef2 EN eng Frontiers Media S.A. https://www.frontiersin.org/articles/10.3389/fmicb.2022.1048522/full https://doaj.org/toc/1664-302X 1664-302X doi:10.3389/fmicb.2022.1048522 https://doaj.org/article/cf2b5361aa8b4b13b1e6accd8998fef2 Frontiers in Microbiology, Vol 13 (2022) biocrusts bacteria eukaryotes microbial phototrophs amplicon sequencing co-occurrence Microbiology QR1-502 article 2022 ftdoajarticles https://doi.org/10.3389/fmicb.2022.1048522 2022-12-30T20:55:56Z A wide range of microorganisms inhabit biocrusts of arctic and sub-arctic regions. These taxa live and thrive under extreme conditions and, moreover, play important roles in biogeochemical cycling. Nevertheless, their diversity and abundance remain ambiguous. Here, we studied microbial community composition in biocrusts from Svalbard and Iceland using amplicon sequencing and epifluorescence microscopy. Sequencing of 16S rRNA gene revealed the dominance of Chloroflexi in the biocrusts from Iceland and Longyearbyen, and Acidobacteria in the biocrusts from Ny-Ålesund and South Svalbard. Within the 18S rRNA gene sequencing dataset, Chloroplastida prevailed in all the samples with dominance of Trebouxiophyceae in the biocrusts from Ny-Ålesund and Embryophyta in the biocrusts from the other localities. Furthermore, cyanobacterial number of cells and biovolume exceeded the microalgal in the biocrusts. Community compositions in the studied sites were correlated to the measured chemical parameters such as conductivity, pH, soil organic matter and mineral nitrogen contents. In addition, co-occurrence analysis showed the dominance of positive potential interactions and, bacterial and eukaryotic taxa co-occurred more frequently together. Article in Journal/Newspaper Arctic Iceland Longyearbyen Ny Ålesund Ny-Ålesund Svalbard Directory of Open Access Journals: DOAJ Articles Arctic Svalbard Ny-Ålesund Longyearbyen Frontiers in Microbiology 13 |
institution |
Open Polar |
collection |
Directory of Open Access Journals: DOAJ Articles |
op_collection_id |
ftdoajarticles |
language |
English |
topic |
biocrusts bacteria eukaryotes microbial phototrophs amplicon sequencing co-occurrence Microbiology QR1-502 |
spellingShingle |
biocrusts bacteria eukaryotes microbial phototrophs amplicon sequencing co-occurrence Microbiology QR1-502 Ekaterina Pushkareva Josef Elster Andreas Holzinger Sarina Niedzwiedz Burkhard Becker Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially? |
topic_facet |
biocrusts bacteria eukaryotes microbial phototrophs amplicon sequencing co-occurrence Microbiology QR1-502 |
description |
A wide range of microorganisms inhabit biocrusts of arctic and sub-arctic regions. These taxa live and thrive under extreme conditions and, moreover, play important roles in biogeochemical cycling. Nevertheless, their diversity and abundance remain ambiguous. Here, we studied microbial community composition in biocrusts from Svalbard and Iceland using amplicon sequencing and epifluorescence microscopy. Sequencing of 16S rRNA gene revealed the dominance of Chloroflexi in the biocrusts from Iceland and Longyearbyen, and Acidobacteria in the biocrusts from Ny-Ålesund and South Svalbard. Within the 18S rRNA gene sequencing dataset, Chloroplastida prevailed in all the samples with dominance of Trebouxiophyceae in the biocrusts from Ny-Ålesund and Embryophyta in the biocrusts from the other localities. Furthermore, cyanobacterial number of cells and biovolume exceeded the microalgal in the biocrusts. Community compositions in the studied sites were correlated to the measured chemical parameters such as conductivity, pH, soil organic matter and mineral nitrogen contents. In addition, co-occurrence analysis showed the dominance of positive potential interactions and, bacterial and eukaryotic taxa co-occurred more frequently together. |
format |
Article in Journal/Newspaper |
author |
Ekaterina Pushkareva Josef Elster Andreas Holzinger Sarina Niedzwiedz Burkhard Becker |
author_facet |
Ekaterina Pushkareva Josef Elster Andreas Holzinger Sarina Niedzwiedz Burkhard Becker |
author_sort |
Ekaterina Pushkareva |
title |
Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially? |
title_short |
Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially? |
title_full |
Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially? |
title_fullStr |
Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially? |
title_full_unstemmed |
Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially? |
title_sort |
biocrusts from iceland and svalbard: does microbial community composition differ substantially? |
publisher |
Frontiers Media S.A. |
publishDate |
2022 |
url |
https://doi.org/10.3389/fmicb.2022.1048522 https://doaj.org/article/cf2b5361aa8b4b13b1e6accd8998fef2 |
geographic |
Arctic Svalbard Ny-Ålesund Longyearbyen |
geographic_facet |
Arctic Svalbard Ny-Ålesund Longyearbyen |
genre |
Arctic Iceland Longyearbyen Ny Ålesund Ny-Ålesund Svalbard |
genre_facet |
Arctic Iceland Longyearbyen Ny Ålesund Ny-Ålesund Svalbard |
op_source |
Frontiers in Microbiology, Vol 13 (2022) |
op_relation |
https://www.frontiersin.org/articles/10.3389/fmicb.2022.1048522/full https://doaj.org/toc/1664-302X 1664-302X doi:10.3389/fmicb.2022.1048522 https://doaj.org/article/cf2b5361aa8b4b13b1e6accd8998fef2 |
op_doi |
https://doi.org/10.3389/fmicb.2022.1048522 |
container_title |
Frontiers in Microbiology |
container_volume |
13 |
_version_ |
1766328233887793152 |