Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially?

A wide range of microorganisms inhabit biocrusts of arctic and sub-arctic regions. These taxa live and thrive under extreme conditions and, moreover, play important roles in biogeochemical cycling. Nevertheless, their diversity and abundance remain ambiguous. Here, we studied microbial community com...

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Published in:Frontiers in Microbiology
Main Authors: Ekaterina Pushkareva, Josef Elster, Andreas Holzinger, Sarina Niedzwiedz, Burkhard Becker
Format: Article in Journal/Newspaper
Language:English
Published: Frontiers Media S.A. 2022
Subjects:
Online Access:https://doi.org/10.3389/fmicb.2022.1048522
https://doaj.org/article/cf2b5361aa8b4b13b1e6accd8998fef2
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spelling ftdoajarticles:oai:doaj.org/article:cf2b5361aa8b4b13b1e6accd8998fef2 2023-05-15T14:56:12+02:00 Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially? Ekaterina Pushkareva Josef Elster Andreas Holzinger Sarina Niedzwiedz Burkhard Becker 2022-12-01T00:00:00Z https://doi.org/10.3389/fmicb.2022.1048522 https://doaj.org/article/cf2b5361aa8b4b13b1e6accd8998fef2 EN eng Frontiers Media S.A. https://www.frontiersin.org/articles/10.3389/fmicb.2022.1048522/full https://doaj.org/toc/1664-302X 1664-302X doi:10.3389/fmicb.2022.1048522 https://doaj.org/article/cf2b5361aa8b4b13b1e6accd8998fef2 Frontiers in Microbiology, Vol 13 (2022) biocrusts bacteria eukaryotes microbial phototrophs amplicon sequencing co-occurrence Microbiology QR1-502 article 2022 ftdoajarticles https://doi.org/10.3389/fmicb.2022.1048522 2022-12-30T20:55:56Z A wide range of microorganisms inhabit biocrusts of arctic and sub-arctic regions. These taxa live and thrive under extreme conditions and, moreover, play important roles in biogeochemical cycling. Nevertheless, their diversity and abundance remain ambiguous. Here, we studied microbial community composition in biocrusts from Svalbard and Iceland using amplicon sequencing and epifluorescence microscopy. Sequencing of 16S rRNA gene revealed the dominance of Chloroflexi in the biocrusts from Iceland and Longyearbyen, and Acidobacteria in the biocrusts from Ny-Ålesund and South Svalbard. Within the 18S rRNA gene sequencing dataset, Chloroplastida prevailed in all the samples with dominance of Trebouxiophyceae in the biocrusts from Ny-Ålesund and Embryophyta in the biocrusts from the other localities. Furthermore, cyanobacterial number of cells and biovolume exceeded the microalgal in the biocrusts. Community compositions in the studied sites were correlated to the measured chemical parameters such as conductivity, pH, soil organic matter and mineral nitrogen contents. In addition, co-occurrence analysis showed the dominance of positive potential interactions and, bacterial and eukaryotic taxa co-occurred more frequently together. Article in Journal/Newspaper Arctic Iceland Longyearbyen Ny Ålesund Ny-Ålesund Svalbard Directory of Open Access Journals: DOAJ Articles Arctic Svalbard Ny-Ålesund Longyearbyen Frontiers in Microbiology 13
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic biocrusts
bacteria
eukaryotes
microbial phototrophs
amplicon sequencing
co-occurrence
Microbiology
QR1-502
spellingShingle biocrusts
bacteria
eukaryotes
microbial phototrophs
amplicon sequencing
co-occurrence
Microbiology
QR1-502
Ekaterina Pushkareva
Josef Elster
Andreas Holzinger
Sarina Niedzwiedz
Burkhard Becker
Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially?
topic_facet biocrusts
bacteria
eukaryotes
microbial phototrophs
amplicon sequencing
co-occurrence
Microbiology
QR1-502
description A wide range of microorganisms inhabit biocrusts of arctic and sub-arctic regions. These taxa live and thrive under extreme conditions and, moreover, play important roles in biogeochemical cycling. Nevertheless, their diversity and abundance remain ambiguous. Here, we studied microbial community composition in biocrusts from Svalbard and Iceland using amplicon sequencing and epifluorescence microscopy. Sequencing of 16S rRNA gene revealed the dominance of Chloroflexi in the biocrusts from Iceland and Longyearbyen, and Acidobacteria in the biocrusts from Ny-Ålesund and South Svalbard. Within the 18S rRNA gene sequencing dataset, Chloroplastida prevailed in all the samples with dominance of Trebouxiophyceae in the biocrusts from Ny-Ålesund and Embryophyta in the biocrusts from the other localities. Furthermore, cyanobacterial number of cells and biovolume exceeded the microalgal in the biocrusts. Community compositions in the studied sites were correlated to the measured chemical parameters such as conductivity, pH, soil organic matter and mineral nitrogen contents. In addition, co-occurrence analysis showed the dominance of positive potential interactions and, bacterial and eukaryotic taxa co-occurred more frequently together.
format Article in Journal/Newspaper
author Ekaterina Pushkareva
Josef Elster
Andreas Holzinger
Sarina Niedzwiedz
Burkhard Becker
author_facet Ekaterina Pushkareva
Josef Elster
Andreas Holzinger
Sarina Niedzwiedz
Burkhard Becker
author_sort Ekaterina Pushkareva
title Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially?
title_short Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially?
title_full Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially?
title_fullStr Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially?
title_full_unstemmed Biocrusts from Iceland and Svalbard: Does microbial community composition differ substantially?
title_sort biocrusts from iceland and svalbard: does microbial community composition differ substantially?
publisher Frontiers Media S.A.
publishDate 2022
url https://doi.org/10.3389/fmicb.2022.1048522
https://doaj.org/article/cf2b5361aa8b4b13b1e6accd8998fef2
geographic Arctic
Svalbard
Ny-Ålesund
Longyearbyen
geographic_facet Arctic
Svalbard
Ny-Ålesund
Longyearbyen
genre Arctic
Iceland
Longyearbyen
Ny Ålesund
Ny-Ålesund
Svalbard
genre_facet Arctic
Iceland
Longyearbyen
Ny Ålesund
Ny-Ålesund
Svalbard
op_source Frontiers in Microbiology, Vol 13 (2022)
op_relation https://www.frontiersin.org/articles/10.3389/fmicb.2022.1048522/full
https://doaj.org/toc/1664-302X
1664-302X
doi:10.3389/fmicb.2022.1048522
https://doaj.org/article/cf2b5361aa8b4b13b1e6accd8998fef2
op_doi https://doi.org/10.3389/fmicb.2022.1048522
container_title Frontiers in Microbiology
container_volume 13
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