Comparison of PCR-based detection of Plasmodium falciparum infections based on single and multicopy genes

Abstract PCR-based assays are the most sensitive and specific methods to detect malaria parasites. This study compared the diagnostic accuracy of three PCR-based assays that do not only differ in their sequence target, but also in the number of copies of their target region, for the detection of Pla...

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Published in:Malaria Journal
Main Authors: Kendjo Eric, Monday Gamaliel C, Awobode Henrietta O, Oyedeji Segun I, Kremsner Peter G, Kun Jürgen F
Format: Article in Journal/Newspaper
Language:English
Published: BMC 2007
Subjects:
Online Access:https://doi.org/10.1186/1475-2875-6-112
https://doaj.org/article/cc87f629607849efa8dcd58830858cab
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spelling ftdoajarticles:oai:doaj.org/article:cc87f629607849efa8dcd58830858cab 2023-05-15T15:05:43+02:00 Comparison of PCR-based detection of Plasmodium falciparum infections based on single and multicopy genes Kendjo Eric Monday Gamaliel C Awobode Henrietta O Oyedeji Segun I Kremsner Peter G Kun Jürgen F 2007-08-01T00:00:00Z https://doi.org/10.1186/1475-2875-6-112 https://doaj.org/article/cc87f629607849efa8dcd58830858cab EN eng BMC http://www.malariajournal.com/content/6/1/112 https://doaj.org/toc/1475-2875 doi:10.1186/1475-2875-6-112 1475-2875 https://doaj.org/article/cc87f629607849efa8dcd58830858cab Malaria Journal, Vol 6, Iss 1, p 112 (2007) Arctic medicine. Tropical medicine RC955-962 Infectious and parasitic diseases RC109-216 article 2007 ftdoajarticles https://doi.org/10.1186/1475-2875-6-112 2022-12-31T08:34:49Z Abstract PCR-based assays are the most sensitive and specific methods to detect malaria parasites. This study compared the diagnostic accuracy of three PCR-based assays that do not only differ in their sequence target, but also in the number of copies of their target region, for the detection of Plasmodium falciparum in 401 individuals living in a malaria-endemic area in Nigeria. Compared to a composite reference generated from results of all the 3 PCR assays, the stevor gene amplification had a sensitivity of 100% ( Kappa = 1; 95% CI = 1.000–1.000), 83% ( Kappa = 0.718; 95% CI = 0.648–0.788) by SSUrRNA gene PCR and 71% ( Kappa = 0.552; 95% CI = 0.478–0.627) by the msa - 2 gene amplification. Results from this study indicate that the stevor gene amplification is the most sensitive technique for the detection of P. falciparum . This assay may be an important reference standard, especially when a confirmatory technique with high sensitivity and specificity is needed for ruling out P. falciparum infection. Article in Journal/Newspaper Arctic Directory of Open Access Journals: DOAJ Articles Arctic Malaria Journal 6 1 112
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Arctic medicine. Tropical medicine
RC955-962
Infectious and parasitic diseases
RC109-216
spellingShingle Arctic medicine. Tropical medicine
RC955-962
Infectious and parasitic diseases
RC109-216
Kendjo Eric
Monday Gamaliel C
Awobode Henrietta O
Oyedeji Segun I
Kremsner Peter G
Kun Jürgen F
Comparison of PCR-based detection of Plasmodium falciparum infections based on single and multicopy genes
topic_facet Arctic medicine. Tropical medicine
RC955-962
Infectious and parasitic diseases
RC109-216
description Abstract PCR-based assays are the most sensitive and specific methods to detect malaria parasites. This study compared the diagnostic accuracy of three PCR-based assays that do not only differ in their sequence target, but also in the number of copies of their target region, for the detection of Plasmodium falciparum in 401 individuals living in a malaria-endemic area in Nigeria. Compared to a composite reference generated from results of all the 3 PCR assays, the stevor gene amplification had a sensitivity of 100% ( Kappa = 1; 95% CI = 1.000–1.000), 83% ( Kappa = 0.718; 95% CI = 0.648–0.788) by SSUrRNA gene PCR and 71% ( Kappa = 0.552; 95% CI = 0.478–0.627) by the msa - 2 gene amplification. Results from this study indicate that the stevor gene amplification is the most sensitive technique for the detection of P. falciparum . This assay may be an important reference standard, especially when a confirmatory technique with high sensitivity and specificity is needed for ruling out P. falciparum infection.
format Article in Journal/Newspaper
author Kendjo Eric
Monday Gamaliel C
Awobode Henrietta O
Oyedeji Segun I
Kremsner Peter G
Kun Jürgen F
author_facet Kendjo Eric
Monday Gamaliel C
Awobode Henrietta O
Oyedeji Segun I
Kremsner Peter G
Kun Jürgen F
author_sort Kendjo Eric
title Comparison of PCR-based detection of Plasmodium falciparum infections based on single and multicopy genes
title_short Comparison of PCR-based detection of Plasmodium falciparum infections based on single and multicopy genes
title_full Comparison of PCR-based detection of Plasmodium falciparum infections based on single and multicopy genes
title_fullStr Comparison of PCR-based detection of Plasmodium falciparum infections based on single and multicopy genes
title_full_unstemmed Comparison of PCR-based detection of Plasmodium falciparum infections based on single and multicopy genes
title_sort comparison of pcr-based detection of plasmodium falciparum infections based on single and multicopy genes
publisher BMC
publishDate 2007
url https://doi.org/10.1186/1475-2875-6-112
https://doaj.org/article/cc87f629607849efa8dcd58830858cab
geographic Arctic
geographic_facet Arctic
genre Arctic
genre_facet Arctic
op_source Malaria Journal, Vol 6, Iss 1, p 112 (2007)
op_relation http://www.malariajournal.com/content/6/1/112
https://doaj.org/toc/1475-2875
doi:10.1186/1475-2875-6-112
1475-2875
https://doaj.org/article/cc87f629607849efa8dcd58830858cab
op_doi https://doi.org/10.1186/1475-2875-6-112
container_title Malaria Journal
container_volume 6
container_issue 1
container_start_page 112
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