Isolation and partial characterization of a new moderate thermophilic Albidovulum sp. SLM16 with transaminase activity from Deception Island, Antarctica

Abstract Background A moderately thermophilic, slightly halophilic, aerobic, Gram-stain negative, bacterial strain, SLM16, was isolated from a mixed of seawater–sand-sediment sample collected from a coastal fumarole located in Whalers Bay, Deception Island, Antarctica. The aim was to screen for ther...

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Published in:Biological Research
Main Authors: Sebastián L. Márquez, Jenny M. Blamey
Format: Article in Journal/Newspaper
Language:English
Published: BMC 2019
Subjects:
Online Access:https://doi.org/10.1186/s40659-018-0210-7
https://doaj.org/article/cc26e0eb93ee49f1b9a63ecdb8d70148
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spelling ftdoajarticles:oai:doaj.org/article:cc26e0eb93ee49f1b9a63ecdb8d70148 2023-05-15T13:35:01+02:00 Isolation and partial characterization of a new moderate thermophilic Albidovulum sp. SLM16 with transaminase activity from Deception Island, Antarctica Sebastián L. Márquez Jenny M. Blamey 2019-02-01T00:00:00Z https://doi.org/10.1186/s40659-018-0210-7 https://doaj.org/article/cc26e0eb93ee49f1b9a63ecdb8d70148 EN eng BMC http://link.springer.com/article/10.1186/s40659-018-0210-7 https://doaj.org/toc/0717-6287 doi:10.1186/s40659-018-0210-7 0717-6287 https://doaj.org/article/cc26e0eb93ee49f1b9a63ecdb8d70148 Biological Research, Vol 52, Iss 1, Pp 1-8 (2019) Antarctica Albiduvulum Moderate thermophile Amine-transaminase Biology (General) QH301-705.5 article 2019 ftdoajarticles https://doi.org/10.1186/s40659-018-0210-7 2022-12-31T02:04:31Z Abstract Background A moderately thermophilic, slightly halophilic, aerobic, Gram-stain negative, bacterial strain, SLM16, was isolated from a mixed of seawater–sand-sediment sample collected from a coastal fumarole located in Whalers Bay, Deception Island, Antarctica. The aim was to screen for thermophilic microorganisms able to degrade primary amines and search for amine transaminase activity for potential industrial application. Results Identification and partial characterization of the microorganism SLM16 were carried out by means of morphological, physiological and biochemical tests along with molecular methods. Cells of strain SLM16 were non-motile irregular rods of 1.5–2.5 μm long and 0.3–0.45 μm wide. Growth occurred in the presence of 0.5–5.5% NaCl within temperature range of 35–55 °C and pH range of 5.5–9.5, respectively. The DNA G+C composition, estimated from ftsY gene, was 66% mol. Phylogenetic analysis using de 16S rRNA gene sequence showed that strain SLM16 belongs to the marine bacterial genus Albidovulum. Conclusion Strain SLM16 is a moderate thermophilic Gram negative microorganisms which belongs to the marine bacterial genus Albidovulum and is closely related to Albidovulum inexpectatum species based on phylogenetic analysis. Additionally, amine-transaminase activity towards the arylaliphatic amine α-methylbenzylamine was detected. Article in Journal/Newspaper Antarc* Antarctica Deception Island Directory of Open Access Journals: DOAJ Articles Deception Island ENVELOPE(-60.633,-60.633,-62.950,-62.950) Whalers Bay ENVELOPE(69.917,69.917,-49.100,-49.100) Biological Research 52 1
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Antarctica
Albiduvulum
Moderate thermophile
Amine-transaminase
Biology (General)
QH301-705.5
spellingShingle Antarctica
Albiduvulum
Moderate thermophile
Amine-transaminase
Biology (General)
QH301-705.5
Sebastián L. Márquez
Jenny M. Blamey
Isolation and partial characterization of a new moderate thermophilic Albidovulum sp. SLM16 with transaminase activity from Deception Island, Antarctica
topic_facet Antarctica
Albiduvulum
Moderate thermophile
Amine-transaminase
Biology (General)
QH301-705.5
description Abstract Background A moderately thermophilic, slightly halophilic, aerobic, Gram-stain negative, bacterial strain, SLM16, was isolated from a mixed of seawater–sand-sediment sample collected from a coastal fumarole located in Whalers Bay, Deception Island, Antarctica. The aim was to screen for thermophilic microorganisms able to degrade primary amines and search for amine transaminase activity for potential industrial application. Results Identification and partial characterization of the microorganism SLM16 were carried out by means of morphological, physiological and biochemical tests along with molecular methods. Cells of strain SLM16 were non-motile irregular rods of 1.5–2.5 μm long and 0.3–0.45 μm wide. Growth occurred in the presence of 0.5–5.5% NaCl within temperature range of 35–55 °C and pH range of 5.5–9.5, respectively. The DNA G+C composition, estimated from ftsY gene, was 66% mol. Phylogenetic analysis using de 16S rRNA gene sequence showed that strain SLM16 belongs to the marine bacterial genus Albidovulum. Conclusion Strain SLM16 is a moderate thermophilic Gram negative microorganisms which belongs to the marine bacterial genus Albidovulum and is closely related to Albidovulum inexpectatum species based on phylogenetic analysis. Additionally, amine-transaminase activity towards the arylaliphatic amine α-methylbenzylamine was detected.
format Article in Journal/Newspaper
author Sebastián L. Márquez
Jenny M. Blamey
author_facet Sebastián L. Márquez
Jenny M. Blamey
author_sort Sebastián L. Márquez
title Isolation and partial characterization of a new moderate thermophilic Albidovulum sp. SLM16 with transaminase activity from Deception Island, Antarctica
title_short Isolation and partial characterization of a new moderate thermophilic Albidovulum sp. SLM16 with transaminase activity from Deception Island, Antarctica
title_full Isolation and partial characterization of a new moderate thermophilic Albidovulum sp. SLM16 with transaminase activity from Deception Island, Antarctica
title_fullStr Isolation and partial characterization of a new moderate thermophilic Albidovulum sp. SLM16 with transaminase activity from Deception Island, Antarctica
title_full_unstemmed Isolation and partial characterization of a new moderate thermophilic Albidovulum sp. SLM16 with transaminase activity from Deception Island, Antarctica
title_sort isolation and partial characterization of a new moderate thermophilic albidovulum sp. slm16 with transaminase activity from deception island, antarctica
publisher BMC
publishDate 2019
url https://doi.org/10.1186/s40659-018-0210-7
https://doaj.org/article/cc26e0eb93ee49f1b9a63ecdb8d70148
long_lat ENVELOPE(-60.633,-60.633,-62.950,-62.950)
ENVELOPE(69.917,69.917,-49.100,-49.100)
geographic Deception Island
Whalers Bay
geographic_facet Deception Island
Whalers Bay
genre Antarc*
Antarctica
Deception Island
genre_facet Antarc*
Antarctica
Deception Island
op_source Biological Research, Vol 52, Iss 1, Pp 1-8 (2019)
op_relation http://link.springer.com/article/10.1186/s40659-018-0210-7
https://doaj.org/toc/0717-6287
doi:10.1186/s40659-018-0210-7
0717-6287
https://doaj.org/article/cc26e0eb93ee49f1b9a63ecdb8d70148
op_doi https://doi.org/10.1186/s40659-018-0210-7
container_title Biological Research
container_volume 52
container_issue 1
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