Starvation alters the liver transcriptome of the innate immune response in Atlantic salmon ( Salmo salar )

• Published in: BMC Genomics
• Main Authors: Secombes Christopher J, Houlihan Dominic F, Douglas Alex, Martin Samuel AM
• Format: Article in Journal/Newspaper
• Language: English
• Published: BMC 2010
• Subjects: Biotechnology; TP248.13-248.65; Genetics; QH426-470; Atlantic salmon; Salmo salar
• Online Access: https://doi.org/10.1186/1471-2164-11-418; https://doaj.org/article/ca15547291d14392933dd4db3f4aa537

Abstract Background The immune response is an energy demanding process, which has effects in many physiological pathways in the body including protein and lipid metabolism. During an inflammatory response the liver is required to produce high levels of acute phase response proteins that attempt to neutralise an invading pathogen. Although this has been extensively studied in both mammals and fish, little is known about how high and low energy reserves modulate the response to an infection in fish which are ectothermic vertebrates. Food withdrawal in fish causes a decrease in metabolic rate so as to preserve protein and lipid energy reserves, which occurs naturally during the life cycle of many salmonids. Here we investigated how the feeding or fasting of Atlantic salmon affected the transcriptional response in the liver to an acute bacterial infection. Results Total liver RNA was extracted from four different groups of salmon. Two groups were fed or starved for 28 days. One of each of the fed or starved groups was then exposed to an acute bacterial infection. Twenty four hours later (day 29) the livers were isolated from all fish for RNA extraction. The transcriptional changes were examined by micro array analysis using a 17 K Atlantic salmon cDNA microarray. The expression profiling results showed major changes in gene transcription in each of the groups. Enrichment for particular biological pathways was examined by analysis of gene ontology. Those fish that were starved decreased immune gene transcription and reduced production of plasma protein genes, and upon infection there was a further decrease in genes encoding plasma proteins but a large increase in acute phase response proteins. The latter was greater in magnitude than in the fish that had been fed prior to infection. The expression of several genes that were found altered during microarray analysis was confirmed by real time PCR. Conclusions We demonstrate that both starvation and infection have profound effects on transcription in the liver of ...