CRITTERBASE, a science-driven data warehouse for marine biota

Abstract Data on marine biota exist in many formats and sources, such as published literature, data repositories, and unpublished material. Due to this heterogeneity, information is difficult to find, access and combine, severely impeding its reuse for further scientific analysis and its long-term a...

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Published in:Scientific Data
Main Authors: Katharina Teschke, Casper Kraan, Paul Kloss, Henrike Andresen, Jan Beermann, Dario Fiorentino, Manuela Gusky, Miriam L. S. Hansen, Rebecca Konijnenberg, Roland Koppe, Hendrik Pehlke, Dieter Piepenburg, Tawfik Sabbagh, Alexa Wrede, Thomas Brey, Jennifer Dannheim
Format: Article in Journal/Newspaper
Language:English
Published: Nature Portfolio 2022
Subjects:
Q
Online Access:https://doi.org/10.1038/s41597-022-01590-1
https://doaj.org/article/c33dfd2b63a6461fb3e48491d0bdea41
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spelling ftdoajarticles:oai:doaj.org/article:c33dfd2b63a6461fb3e48491d0bdea41 2023-05-15T13:51:27+02:00 CRITTERBASE, a science-driven data warehouse for marine biota Katharina Teschke Casper Kraan Paul Kloss Henrike Andresen Jan Beermann Dario Fiorentino Manuela Gusky Miriam L. S. Hansen Rebecca Konijnenberg Roland Koppe Hendrik Pehlke Dieter Piepenburg Tawfik Sabbagh Alexa Wrede Thomas Brey Jennifer Dannheim 2022-08-01T00:00:00Z https://doi.org/10.1038/s41597-022-01590-1 https://doaj.org/article/c33dfd2b63a6461fb3e48491d0bdea41 EN eng Nature Portfolio https://doi.org/10.1038/s41597-022-01590-1 https://doaj.org/toc/2052-4463 doi:10.1038/s41597-022-01590-1 2052-4463 https://doaj.org/article/c33dfd2b63a6461fb3e48491d0bdea41 Scientific Data, Vol 9, Iss 1, Pp 1-7 (2022) Science Q article 2022 ftdoajarticles https://doi.org/10.1038/s41597-022-01590-1 2022-12-30T20:40:20Z Abstract Data on marine biota exist in many formats and sources, such as published literature, data repositories, and unpublished material. Due to this heterogeneity, information is difficult to find, access and combine, severely impeding its reuse for further scientific analysis and its long-term availability for future generations. To address this challenge, we present CRITTERBASE, a publicly accessible data warehouse and interactive portal that currently hosts quality-controlled and taxonomically standardized presence/absence, abundance, and biomass data for 18,644 samples and 3,664 benthic taxa (2,824 of which at species level). These samples were collected by grabs, underwater imaging or trawls in Arctic, North Sea and Antarctic regions between the years 1800 and 2014. Data were collated from literature, unpublished data, own research and online repositories. All metadata and links to primary sources are included. We envision CRITTERBASE becoming a valuable and continuously expanding tool for a wide range of usages, such as studies of spatio-temporal biodiversity patterns, impacts and risks of climate change or the evidence-based design of marine protection policies. Article in Journal/Newspaper Antarc* Antarctic Arctic Climate change Directory of Open Access Journals: DOAJ Articles Antarctic Arctic Scientific Data 9 1
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Science
Q
spellingShingle Science
Q
Katharina Teschke
Casper Kraan
Paul Kloss
Henrike Andresen
Jan Beermann
Dario Fiorentino
Manuela Gusky
Miriam L. S. Hansen
Rebecca Konijnenberg
Roland Koppe
Hendrik Pehlke
Dieter Piepenburg
Tawfik Sabbagh
Alexa Wrede
Thomas Brey
Jennifer Dannheim
CRITTERBASE, a science-driven data warehouse for marine biota
topic_facet Science
Q
description Abstract Data on marine biota exist in many formats and sources, such as published literature, data repositories, and unpublished material. Due to this heterogeneity, information is difficult to find, access and combine, severely impeding its reuse for further scientific analysis and its long-term availability for future generations. To address this challenge, we present CRITTERBASE, a publicly accessible data warehouse and interactive portal that currently hosts quality-controlled and taxonomically standardized presence/absence, abundance, and biomass data for 18,644 samples and 3,664 benthic taxa (2,824 of which at species level). These samples were collected by grabs, underwater imaging or trawls in Arctic, North Sea and Antarctic regions between the years 1800 and 2014. Data were collated from literature, unpublished data, own research and online repositories. All metadata and links to primary sources are included. We envision CRITTERBASE becoming a valuable and continuously expanding tool for a wide range of usages, such as studies of spatio-temporal biodiversity patterns, impacts and risks of climate change or the evidence-based design of marine protection policies.
format Article in Journal/Newspaper
author Katharina Teschke
Casper Kraan
Paul Kloss
Henrike Andresen
Jan Beermann
Dario Fiorentino
Manuela Gusky
Miriam L. S. Hansen
Rebecca Konijnenberg
Roland Koppe
Hendrik Pehlke
Dieter Piepenburg
Tawfik Sabbagh
Alexa Wrede
Thomas Brey
Jennifer Dannheim
author_facet Katharina Teschke
Casper Kraan
Paul Kloss
Henrike Andresen
Jan Beermann
Dario Fiorentino
Manuela Gusky
Miriam L. S. Hansen
Rebecca Konijnenberg
Roland Koppe
Hendrik Pehlke
Dieter Piepenburg
Tawfik Sabbagh
Alexa Wrede
Thomas Brey
Jennifer Dannheim
author_sort Katharina Teschke
title CRITTERBASE, a science-driven data warehouse for marine biota
title_short CRITTERBASE, a science-driven data warehouse for marine biota
title_full CRITTERBASE, a science-driven data warehouse for marine biota
title_fullStr CRITTERBASE, a science-driven data warehouse for marine biota
title_full_unstemmed CRITTERBASE, a science-driven data warehouse for marine biota
title_sort critterbase, a science-driven data warehouse for marine biota
publisher Nature Portfolio
publishDate 2022
url https://doi.org/10.1038/s41597-022-01590-1
https://doaj.org/article/c33dfd2b63a6461fb3e48491d0bdea41
geographic Antarctic
Arctic
geographic_facet Antarctic
Arctic
genre Antarc*
Antarctic
Arctic
Climate change
genre_facet Antarc*
Antarctic
Arctic
Climate change
op_source Scientific Data, Vol 9, Iss 1, Pp 1-7 (2022)
op_relation https://doi.org/10.1038/s41597-022-01590-1
https://doaj.org/toc/2052-4463
doi:10.1038/s41597-022-01590-1
2052-4463
https://doaj.org/article/c33dfd2b63a6461fb3e48491d0bdea41
op_doi https://doi.org/10.1038/s41597-022-01590-1
container_title Scientific Data
container_volume 9
container_issue 1
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