Bog bacterial community: data from north-western Russia

Wetlands occupy up to 35% of the boreal biome in Russia, according to various estimates. Boreal bogs are global carbon sinks, accounting for more than 65% of the soil carbon stored in the wetland ecosystems of the world. The decomposition of plant residues is one of the most important components of...

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Published in:Biodiversity Data Journal
Main Authors: Ivan Zubov, Dmitrij Shpanov, Tamara Ponomareva, Andrey Aksenov
Format: Article in Journal/Newspaper
Language:English
Published: Pensoft Publishers 2024
Subjects:
Online Access:https://doi.org/10.3897/BDJ.12.e118448
https://doaj.org/article/c22976b8359e4c58ac6a1273637e9c8a
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spelling ftdoajarticles:oai:doaj.org/article:c22976b8359e4c58ac6a1273637e9c8a 2024-09-15T18:25:09+00:00 Bog bacterial community: data from north-western Russia Ivan Zubov Dmitrij Shpanov Tamara Ponomareva Andrey Aksenov 2024-08-01T00:00:00Z https://doi.org/10.3897/BDJ.12.e118448 https://doaj.org/article/c22976b8359e4c58ac6a1273637e9c8a EN eng Pensoft Publishers https://bdj.pensoft.net/article/118448/download/pdf/ https://bdj.pensoft.net/article/118448/download/xml/ https://bdj.pensoft.net/article/118448/ https://doaj.org/toc/1314-2828 doi:10.3897/BDJ.12.e118448 1314-2828 https://doaj.org/article/c22976b8359e4c58ac6a1273637e9c8a Biodiversity Data Journal, Vol 12, Iss , Pp 1-15 (2024) barcode amplicon sequencing 16S rRNA gene prokar Biology (General) QH301-705.5 article 2024 ftdoajarticles https://doi.org/10.3897/BDJ.12.e118448 2024-08-26T15:21:16Z Wetlands occupy up to 35% of the boreal biome in Russia, according to various estimates. Boreal bogs are global carbon sinks, accounting for more than 65% of the soil carbon stored in the wetland ecosystems of the world. The decomposition of plant residues is one of the most important components of the carbon cycle in wetland systems, while the violation of their fragile balance due to climate change increases the rate of mineralisation of organic matter and releases large amounts of carbon to the atmosphere. The biochemical processes occurring in a peat deposit determine the intensity of the destruction of organic matter and gas exchange. However, the microbial communities of the boreal ombrotrophic bogs, regulating those processes, are poorly studied.Hence, a study of the prokaryote communities of the peat deposits of the southern White Sea coastal ombrotrophic bogs (mostly spread in north-western Russia) was carried out. The taxonomic composition of archaea and bacteria sampled from the deposit’s depth of 0–310 cm was studied using high-throughput sequencing of V4 sites of 16S rRNA gene by Illumina technology. As a result, 105 species belonging to 19 phylums were identified. The dominant specific phyla were Pseudomonadota, Acidobacteriota and Verrucomicrobiota, the non-specific phylum being Desulfobacterota. Various groups of methanogenic, methylotrophic and nitrogen-fixing microorganisms were identified. Shannon's biodiversity ranged from 3.5 to 4.6 and ChaO1 - from 232 to 351, decreasing within the depth. Article in Journal/Newspaper North-Western Russia White Sea Directory of Open Access Journals: DOAJ Articles Biodiversity Data Journal 12
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic barcode amplicon sequencing
16S rRNA gene
prokar
Biology (General)
QH301-705.5
spellingShingle barcode amplicon sequencing
16S rRNA gene
prokar
Biology (General)
QH301-705.5
Ivan Zubov
Dmitrij Shpanov
Tamara Ponomareva
Andrey Aksenov
Bog bacterial community: data from north-western Russia
topic_facet barcode amplicon sequencing
16S rRNA gene
prokar
Biology (General)
QH301-705.5
description Wetlands occupy up to 35% of the boreal biome in Russia, according to various estimates. Boreal bogs are global carbon sinks, accounting for more than 65% of the soil carbon stored in the wetland ecosystems of the world. The decomposition of plant residues is one of the most important components of the carbon cycle in wetland systems, while the violation of their fragile balance due to climate change increases the rate of mineralisation of organic matter and releases large amounts of carbon to the atmosphere. The biochemical processes occurring in a peat deposit determine the intensity of the destruction of organic matter and gas exchange. However, the microbial communities of the boreal ombrotrophic bogs, regulating those processes, are poorly studied.Hence, a study of the prokaryote communities of the peat deposits of the southern White Sea coastal ombrotrophic bogs (mostly spread in north-western Russia) was carried out. The taxonomic composition of archaea and bacteria sampled from the deposit’s depth of 0–310 cm was studied using high-throughput sequencing of V4 sites of 16S rRNA gene by Illumina technology. As a result, 105 species belonging to 19 phylums were identified. The dominant specific phyla were Pseudomonadota, Acidobacteriota and Verrucomicrobiota, the non-specific phylum being Desulfobacterota. Various groups of methanogenic, methylotrophic and nitrogen-fixing microorganisms were identified. Shannon's biodiversity ranged from 3.5 to 4.6 and ChaO1 - from 232 to 351, decreasing within the depth.
format Article in Journal/Newspaper
author Ivan Zubov
Dmitrij Shpanov
Tamara Ponomareva
Andrey Aksenov
author_facet Ivan Zubov
Dmitrij Shpanov
Tamara Ponomareva
Andrey Aksenov
author_sort Ivan Zubov
title Bog bacterial community: data from north-western Russia
title_short Bog bacterial community: data from north-western Russia
title_full Bog bacterial community: data from north-western Russia
title_fullStr Bog bacterial community: data from north-western Russia
title_full_unstemmed Bog bacterial community: data from north-western Russia
title_sort bog bacterial community: data from north-western russia
publisher Pensoft Publishers
publishDate 2024
url https://doi.org/10.3897/BDJ.12.e118448
https://doaj.org/article/c22976b8359e4c58ac6a1273637e9c8a
genre North-Western Russia
White Sea
genre_facet North-Western Russia
White Sea
op_source Biodiversity Data Journal, Vol 12, Iss , Pp 1-15 (2024)
op_relation https://bdj.pensoft.net/article/118448/download/pdf/
https://bdj.pensoft.net/article/118448/download/xml/
https://bdj.pensoft.net/article/118448/
https://doaj.org/toc/1314-2828
doi:10.3897/BDJ.12.e118448
1314-2828
https://doaj.org/article/c22976b8359e4c58ac6a1273637e9c8a
op_doi https://doi.org/10.3897/BDJ.12.e118448
container_title Biodiversity Data Journal
container_volume 12
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