Trans-Arctic vicariance in Strongylocentrotus sea urchins

The sea urchins Strongylocentotus pallidus and S. droebachiensis first invaded the Atlantic Ocean from the Pacific following the opening of the Bering seaway in the late Miocene. While trans-Arctic dispersal during the Pleistocene is thought to have maintained species’ integrity, a recent genomic an...

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Published in:PeerJ
Main Authors: Jason A. Addison, Jinhong Kim
Format: Article in Journal/Newspaper
Language:English
Published: PeerJ Inc. 2022
Subjects:
R
Online Access:https://doi.org/10.7717/peerj.13930
https://doaj.org/article/bdcd2b7db41d4773a21dc14e433408a7
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spelling ftdoajarticles:oai:doaj.org/article:bdcd2b7db41d4773a21dc14e433408a7 2024-01-07T09:41:13+01:00 Trans-Arctic vicariance in Strongylocentrotus sea urchins Jason A. Addison Jinhong Kim 2022-09-01T00:00:00Z https://doi.org/10.7717/peerj.13930 https://doaj.org/article/bdcd2b7db41d4773a21dc14e433408a7 EN eng PeerJ Inc. https://peerj.com/articles/13930.pdf https://peerj.com/articles/13930/ https://doaj.org/toc/2167-8359 doi:10.7717/peerj.13930 2167-8359 https://doaj.org/article/bdcd2b7db41d4773a21dc14e433408a7 PeerJ, Vol 10, p e13930 (2022) Biogeography Population genetics Evolution Trans-Arctic interchange Reproductive isolation mitochondrial DNA Medicine R Biology (General) QH301-705.5 article 2022 ftdoajarticles https://doi.org/10.7717/peerj.13930 2023-12-10T01:50:05Z The sea urchins Strongylocentotus pallidus and S. droebachiensis first invaded the Atlantic Ocean from the Pacific following the opening of the Bering seaway in the late Miocene. While trans-Arctic dispersal during the Pleistocene is thought to have maintained species’ integrity, a recent genomic analysis identified a reproductively isolated cryptic species within S. droebachiensis. Based on previous studies, the distribution of one of these lineages (S. droebachiensis W) includes the shallow water habitats of the northwest Atlantic and Pacific, while the other (S. droebachiensis E) is found throughout the shallow habitat in the northeast but is mostly restricted to deep habitats (>65 m) in the northwest Atlantic. However, since genetic variation within S. droebachiensis has been largely unstudied in the north Pacific and Arctic oceans, the biogeography of the cryptic species is not well known, and it is difficult to identify the mechanisms driving population subdivision and speciation. Here we use population genetic analyses to characterize the distribution of each species, and to test hypotheses about the role of vicariance in the evolution of systematic and genomic divergence within the genus. We collected individuals of all three Strongylocentrotus species (n = 365) from 10 previously unsampled locations in the northeast Pacific and north Atlantic (Labrador Sea and Norway), and generated mtDNA sequence data for a 418 bp fragment of cytochrome c oxidase subunit I (COI). To assess the biogeography of all three species, we combined our alignment with five previously published data sets (total n = 789) and used statistical parsimony and maximum likelihood to identify species and characterize their distribution within and among oceans. Patterns of haplotype sharing, pairwise FST, and hierarchical analyses of molecular variance (AMOVA) identified trans-Arctic dispersal in S. pallidus and S. droebachiensis W, but other than 5 previously reported singletons we failed to detect additional mtDNA haplotypes of S. ... Article in Journal/Newspaper Arctic Labrador Sea North Atlantic Northwest Atlantic Directory of Open Access Journals: DOAJ Articles Arctic Norway Pacific PeerJ 10 e13930
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Biogeography
Population genetics
Evolution
Trans-Arctic interchange
Reproductive isolation
mitochondrial DNA
Medicine
R
Biology (General)
QH301-705.5
spellingShingle Biogeography
Population genetics
Evolution
Trans-Arctic interchange
Reproductive isolation
mitochondrial DNA
Medicine
R
Biology (General)
QH301-705.5
Jason A. Addison
Jinhong Kim
Trans-Arctic vicariance in Strongylocentrotus sea urchins
topic_facet Biogeography
Population genetics
Evolution
Trans-Arctic interchange
Reproductive isolation
mitochondrial DNA
Medicine
R
Biology (General)
QH301-705.5
description The sea urchins Strongylocentotus pallidus and S. droebachiensis first invaded the Atlantic Ocean from the Pacific following the opening of the Bering seaway in the late Miocene. While trans-Arctic dispersal during the Pleistocene is thought to have maintained species’ integrity, a recent genomic analysis identified a reproductively isolated cryptic species within S. droebachiensis. Based on previous studies, the distribution of one of these lineages (S. droebachiensis W) includes the shallow water habitats of the northwest Atlantic and Pacific, while the other (S. droebachiensis E) is found throughout the shallow habitat in the northeast but is mostly restricted to deep habitats (>65 m) in the northwest Atlantic. However, since genetic variation within S. droebachiensis has been largely unstudied in the north Pacific and Arctic oceans, the biogeography of the cryptic species is not well known, and it is difficult to identify the mechanisms driving population subdivision and speciation. Here we use population genetic analyses to characterize the distribution of each species, and to test hypotheses about the role of vicariance in the evolution of systematic and genomic divergence within the genus. We collected individuals of all three Strongylocentrotus species (n = 365) from 10 previously unsampled locations in the northeast Pacific and north Atlantic (Labrador Sea and Norway), and generated mtDNA sequence data for a 418 bp fragment of cytochrome c oxidase subunit I (COI). To assess the biogeography of all three species, we combined our alignment with five previously published data sets (total n = 789) and used statistical parsimony and maximum likelihood to identify species and characterize their distribution within and among oceans. Patterns of haplotype sharing, pairwise FST, and hierarchical analyses of molecular variance (AMOVA) identified trans-Arctic dispersal in S. pallidus and S. droebachiensis W, but other than 5 previously reported singletons we failed to detect additional mtDNA haplotypes of S. ...
format Article in Journal/Newspaper
author Jason A. Addison
Jinhong Kim
author_facet Jason A. Addison
Jinhong Kim
author_sort Jason A. Addison
title Trans-Arctic vicariance in Strongylocentrotus sea urchins
title_short Trans-Arctic vicariance in Strongylocentrotus sea urchins
title_full Trans-Arctic vicariance in Strongylocentrotus sea urchins
title_fullStr Trans-Arctic vicariance in Strongylocentrotus sea urchins
title_full_unstemmed Trans-Arctic vicariance in Strongylocentrotus sea urchins
title_sort trans-arctic vicariance in strongylocentrotus sea urchins
publisher PeerJ Inc.
publishDate 2022
url https://doi.org/10.7717/peerj.13930
https://doaj.org/article/bdcd2b7db41d4773a21dc14e433408a7
geographic Arctic
Norway
Pacific
geographic_facet Arctic
Norway
Pacific
genre Arctic
Labrador Sea
North Atlantic
Northwest Atlantic
genre_facet Arctic
Labrador Sea
North Atlantic
Northwest Atlantic
op_source PeerJ, Vol 10, p e13930 (2022)
op_relation https://peerj.com/articles/13930.pdf
https://peerj.com/articles/13930/
https://doaj.org/toc/2167-8359
doi:10.7717/peerj.13930
2167-8359
https://doaj.org/article/bdcd2b7db41d4773a21dc14e433408a7
op_doi https://doi.org/10.7717/peerj.13930
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