Improving preservation state assessment of carbonate microfossils in paleontological research using label-free stimulated Raman imaging.

In micropaleontological and paleoclimatological studies based on microfossil morphology and geochemistry, assessing the preservation state of fossils is of the highest importance, as diagenetic alteration invalidates textural features and compromises the correct interpretation of stable isotope and...

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Published in:PLOS ONE
Main Authors: Asefeh Golreihan, Christian Steuwe, Lineke Woelders, Arne Deprez, Yasuhiko Fujita, Johan Vellekoop, Rudy Swennen, Maarten B J Roeffaers
Format: Article in Journal/Newspaper
Language:English
Published: Public Library of Science (PLoS) 2018
Subjects:
R
Q
Online Access:https://doi.org/10.1371/journal.pone.0199695
https://doaj.org/article/ba1fd2f3d8b84ebeb29a446a7586888e
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spelling ftdoajarticles:oai:doaj.org/article:ba1fd2f3d8b84ebeb29a446a7586888e 2023-05-15T18:00:53+02:00 Improving preservation state assessment of carbonate microfossils in paleontological research using label-free stimulated Raman imaging. Asefeh Golreihan Christian Steuwe Lineke Woelders Arne Deprez Yasuhiko Fujita Johan Vellekoop Rudy Swennen Maarten B J Roeffaers 2018-01-01T00:00:00Z https://doi.org/10.1371/journal.pone.0199695 https://doaj.org/article/ba1fd2f3d8b84ebeb29a446a7586888e EN eng Public Library of Science (PLoS) http://europepmc.org/articles/PMC6040746?pdf=render https://doaj.org/toc/1932-6203 1932-6203 doi:10.1371/journal.pone.0199695 https://doaj.org/article/ba1fd2f3d8b84ebeb29a446a7586888e PLoS ONE, Vol 13, Iss 7, p e0199695 (2018) Medicine R Science Q article 2018 ftdoajarticles https://doi.org/10.1371/journal.pone.0199695 2022-12-31T04:04:44Z In micropaleontological and paleoclimatological studies based on microfossil morphology and geochemistry, assessing the preservation state of fossils is of the highest importance, as diagenetic alteration invalidates textural features and compromises the correct interpretation of stable isotope and trace elemental analysis. In this paper, we present a novel non-invasive and label-free tomographic approach to reconstruct the three-dimensional architecture of microfossils with submicron resolution based on stimulated Raman scattering (SRS). Furthermore, this technique allows deciphering the three-dimensional (3D) distribution of the minerals within these fossils in a chemically sensitive manner. Our method, therefore, allows to identify microfossils, to chemically map their internal structure and eventually to determine their preservation state. We demonstrate the effectiveness of this method by analyzing several benthic and planktonic foraminifera, obtaining full 3D distributions of carbonate, iron oxide and porosity for each specimen. Subsequently, the preservation state of each microfossil can be assessed using these 3D compositional maps. The technique is highly sensitive, non-destructive, time-efficient and avoids the need for sample pretreatment. Therefore, its predestined application is the final check of the state of microfossils before applying subsequent geochemical analyses. Article in Journal/Newspaper Planktonic foraminifera Directory of Open Access Journals: DOAJ Articles PLOS ONE 13 7 e0199695
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Medicine
R
Science
Q
spellingShingle Medicine
R
Science
Q
Asefeh Golreihan
Christian Steuwe
Lineke Woelders
Arne Deprez
Yasuhiko Fujita
Johan Vellekoop
Rudy Swennen
Maarten B J Roeffaers
Improving preservation state assessment of carbonate microfossils in paleontological research using label-free stimulated Raman imaging.
topic_facet Medicine
R
Science
Q
description In micropaleontological and paleoclimatological studies based on microfossil morphology and geochemistry, assessing the preservation state of fossils is of the highest importance, as diagenetic alteration invalidates textural features and compromises the correct interpretation of stable isotope and trace elemental analysis. In this paper, we present a novel non-invasive and label-free tomographic approach to reconstruct the three-dimensional architecture of microfossils with submicron resolution based on stimulated Raman scattering (SRS). Furthermore, this technique allows deciphering the three-dimensional (3D) distribution of the minerals within these fossils in a chemically sensitive manner. Our method, therefore, allows to identify microfossils, to chemically map their internal structure and eventually to determine their preservation state. We demonstrate the effectiveness of this method by analyzing several benthic and planktonic foraminifera, obtaining full 3D distributions of carbonate, iron oxide and porosity for each specimen. Subsequently, the preservation state of each microfossil can be assessed using these 3D compositional maps. The technique is highly sensitive, non-destructive, time-efficient and avoids the need for sample pretreatment. Therefore, its predestined application is the final check of the state of microfossils before applying subsequent geochemical analyses.
format Article in Journal/Newspaper
author Asefeh Golreihan
Christian Steuwe
Lineke Woelders
Arne Deprez
Yasuhiko Fujita
Johan Vellekoop
Rudy Swennen
Maarten B J Roeffaers
author_facet Asefeh Golreihan
Christian Steuwe
Lineke Woelders
Arne Deprez
Yasuhiko Fujita
Johan Vellekoop
Rudy Swennen
Maarten B J Roeffaers
author_sort Asefeh Golreihan
title Improving preservation state assessment of carbonate microfossils in paleontological research using label-free stimulated Raman imaging.
title_short Improving preservation state assessment of carbonate microfossils in paleontological research using label-free stimulated Raman imaging.
title_full Improving preservation state assessment of carbonate microfossils in paleontological research using label-free stimulated Raman imaging.
title_fullStr Improving preservation state assessment of carbonate microfossils in paleontological research using label-free stimulated Raman imaging.
title_full_unstemmed Improving preservation state assessment of carbonate microfossils in paleontological research using label-free stimulated Raman imaging.
title_sort improving preservation state assessment of carbonate microfossils in paleontological research using label-free stimulated raman imaging.
publisher Public Library of Science (PLoS)
publishDate 2018
url https://doi.org/10.1371/journal.pone.0199695
https://doaj.org/article/ba1fd2f3d8b84ebeb29a446a7586888e
genre Planktonic foraminifera
genre_facet Planktonic foraminifera
op_source PLoS ONE, Vol 13, Iss 7, p e0199695 (2018)
op_relation http://europepmc.org/articles/PMC6040746?pdf=render
https://doaj.org/toc/1932-6203
1932-6203
doi:10.1371/journal.pone.0199695
https://doaj.org/article/ba1fd2f3d8b84ebeb29a446a7586888e
op_doi https://doi.org/10.1371/journal.pone.0199695
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