Metagenomic analyses of the late Pleistocene permafrost – additional tools for reconstruction of environmental conditions

A comparative analysis of the metagenomes from two 30 000-year-old permafrost samples, one of lake-alluvial origin and the other from late Pleistocene Ice Complex sediments, revealed significant differences within microbial communities. The late Pleistocene Ice Complex sediments (which have been cha...

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Published in:Biogeosciences
Main Authors: E. Rivkina, L. Petrovskaya, T. Vishnivetskaya, K. Krivushin, L. Shmakova, M. Tutukina, A. Meyers, F. Kondrashov
Format: Article in Journal/Newspaper
Language:English
Published: Copernicus Publications 2016
Subjects:
Ice
Online Access:https://doi.org/10.5194/bg-13-2207-2016
https://doaj.org/article/b40e6f45e52940cea09000e23ac48231
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spelling ftdoajarticles:oai:doaj.org/article:b40e6f45e52940cea09000e23ac48231 2023-05-15T16:36:54+02:00 Metagenomic analyses of the late Pleistocene permafrost – additional tools for reconstruction of environmental conditions E. Rivkina L. Petrovskaya T. Vishnivetskaya K. Krivushin L. Shmakova M. Tutukina A. Meyers F. Kondrashov 2016-04-01T00:00:00Z https://doi.org/10.5194/bg-13-2207-2016 https://doaj.org/article/b40e6f45e52940cea09000e23ac48231 EN eng Copernicus Publications http://www.biogeosciences.net/13/2207/2016/bg-13-2207-2016.pdf https://doaj.org/toc/1726-4170 https://doaj.org/toc/1726-4189 1726-4170 1726-4189 doi:10.5194/bg-13-2207-2016 https://doaj.org/article/b40e6f45e52940cea09000e23ac48231 Biogeosciences, Vol 13, Iss 7, Pp 2207-2219 (2016) Ecology QH540-549.5 Life QH501-531 Geology QE1-996.5 article 2016 ftdoajarticles https://doi.org/10.5194/bg-13-2207-2016 2022-12-31T02:07:26Z A comparative analysis of the metagenomes from two 30 000-year-old permafrost samples, one of lake-alluvial origin and the other from late Pleistocene Ice Complex sediments, revealed significant differences within microbial communities. The late Pleistocene Ice Complex sediments (which have been characterized by the absence of methane with lower values of redox potential and Fe 2+ content) showed a low abundance of methanogenic archaea and enzymes from both the carbon and nitrogen cycles, but a higher abundance of enzymes associated with the sulfur cycle. The metagenomic and geochemical analyses described in the paper provide evidence that the formation of the sampled late Pleistocene Ice Complex sediments likely took place under much more aerobic conditions than lake-alluvial sediments. Article in Journal/Newspaper Ice permafrost Directory of Open Access Journals: DOAJ Articles Biogeosciences 13 7 2207 2219
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Ecology
QH540-549.5
Life
QH501-531
Geology
QE1-996.5
spellingShingle Ecology
QH540-549.5
Life
QH501-531
Geology
QE1-996.5
E. Rivkina
L. Petrovskaya
T. Vishnivetskaya
K. Krivushin
L. Shmakova
M. Tutukina
A. Meyers
F. Kondrashov
Metagenomic analyses of the late Pleistocene permafrost – additional tools for reconstruction of environmental conditions
topic_facet Ecology
QH540-549.5
Life
QH501-531
Geology
QE1-996.5
description A comparative analysis of the metagenomes from two 30 000-year-old permafrost samples, one of lake-alluvial origin and the other from late Pleistocene Ice Complex sediments, revealed significant differences within microbial communities. The late Pleistocene Ice Complex sediments (which have been characterized by the absence of methane with lower values of redox potential and Fe 2+ content) showed a low abundance of methanogenic archaea and enzymes from both the carbon and nitrogen cycles, but a higher abundance of enzymes associated with the sulfur cycle. The metagenomic and geochemical analyses described in the paper provide evidence that the formation of the sampled late Pleistocene Ice Complex sediments likely took place under much more aerobic conditions than lake-alluvial sediments.
format Article in Journal/Newspaper
author E. Rivkina
L. Petrovskaya
T. Vishnivetskaya
K. Krivushin
L. Shmakova
M. Tutukina
A. Meyers
F. Kondrashov
author_facet E. Rivkina
L. Petrovskaya
T. Vishnivetskaya
K. Krivushin
L. Shmakova
M. Tutukina
A. Meyers
F. Kondrashov
author_sort E. Rivkina
title Metagenomic analyses of the late Pleistocene permafrost – additional tools for reconstruction of environmental conditions
title_short Metagenomic analyses of the late Pleistocene permafrost – additional tools for reconstruction of environmental conditions
title_full Metagenomic analyses of the late Pleistocene permafrost – additional tools for reconstruction of environmental conditions
title_fullStr Metagenomic analyses of the late Pleistocene permafrost – additional tools for reconstruction of environmental conditions
title_full_unstemmed Metagenomic analyses of the late Pleistocene permafrost – additional tools for reconstruction of environmental conditions
title_sort metagenomic analyses of the late pleistocene permafrost – additional tools for reconstruction of environmental conditions
publisher Copernicus Publications
publishDate 2016
url https://doi.org/10.5194/bg-13-2207-2016
https://doaj.org/article/b40e6f45e52940cea09000e23ac48231
genre Ice
permafrost
genre_facet Ice
permafrost
op_source Biogeosciences, Vol 13, Iss 7, Pp 2207-2219 (2016)
op_relation http://www.biogeosciences.net/13/2207/2016/bg-13-2207-2016.pdf
https://doaj.org/toc/1726-4170
https://doaj.org/toc/1726-4189
1726-4170
1726-4189
doi:10.5194/bg-13-2207-2016
https://doaj.org/article/b40e6f45e52940cea09000e23ac48231
op_doi https://doi.org/10.5194/bg-13-2207-2016
container_title Biogeosciences
container_volume 13
container_issue 7
container_start_page 2207
op_container_end_page 2219
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