Correlated velocity models as a fundamental unit of animal movement: synthesis and applications

Abstract Background Continuous time movement models resolve many of the problems with scaling, sampling, and interpretation that affect discrete movement models. They can, however, be challenging to estimate, have been presented in inconsistent ways, and are not widely used. Methods We review the li...

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Published in:Movement Ecology
Main Authors: Eliezer Gurarie, Christen H. Fleming, William F. Fagan, Kristin L. Laidre, Jesús Hernández-Pliego, Otso Ovaskainen
Format: Article in Journal/Newspaper
Language:English
Published: BMC 2017
Subjects:
Online Access:https://doi.org/10.1186/s40462-017-0103-3
https://doaj.org/article/a93d180dfb51438784316cb997a8bddd
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spelling ftdoajarticles:oai:doaj.org/article:a93d180dfb51438784316cb997a8bddd 2023-05-15T15:35:58+02:00 Correlated velocity models as a fundamental unit of animal movement: synthesis and applications Eliezer Gurarie Christen H. Fleming William F. Fagan Kristin L. Laidre Jesús Hernández-Pliego Otso Ovaskainen 2017-05-01T00:00:00Z https://doi.org/10.1186/s40462-017-0103-3 https://doaj.org/article/a93d180dfb51438784316cb997a8bddd EN eng BMC http://link.springer.com/article/10.1186/s40462-017-0103-3 https://doaj.org/toc/2051-3933 doi:10.1186/s40462-017-0103-3 2051-3933 https://doaj.org/article/a93d180dfb51438784316cb997a8bddd Movement Ecology, Vol 5, Iss 1, Pp 1-18 (2017) Correlated velocity movement Velocity autocovariance function Correlated random walk Integrated Ornstein-Uhlenbeck process Balaena mysticetus Thermal soaring Biology (General) QH301-705.5 article 2017 ftdoajarticles https://doi.org/10.1186/s40462-017-0103-3 2022-12-31T13:18:27Z Abstract Background Continuous time movement models resolve many of the problems with scaling, sampling, and interpretation that affect discrete movement models. They can, however, be challenging to estimate, have been presented in inconsistent ways, and are not widely used. Methods We review the literature on integrated Ornstein-Uhlenbeck velocity models and propose four fundamental correlated velocity movement models (CVM’s): random, advective, rotational, and rotational-advective. The models are defined in terms of biologically meaningful speeds and time scales of autocorrelation. We summarize several approaches to estimating the models, and apply these tools for the higher order task of behavioral partitioning via change point analysis. Results An array of simulation illustrate the precision and accuracy of the estimation tools. An analysis of a swimming track of a bowhead whale (Balaena mysticetus) illustrates their robustness to irregular and sparse sampling and identifies switches between slower and faster, and directed vs. random movements. An analysis of a short flight of a lesser kestrel (Falco naumanni) identifies exact moments when switches occur between loopy, thermal soaring and directed flapping or gliding flights. Conclusions We provide tools to estimate parameters and perform change point analyses in continuous time movement models as an R package (smoove). These resources, together with the synthesis, should facilitate the wider application and development of correlated velocity models among movement ecologists. Article in Journal/Newspaper Balaena mysticetus bowhead whale Directory of Open Access Journals: DOAJ Articles Movement Ecology 5 1
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Correlated velocity movement
Velocity autocovariance function
Correlated random walk
Integrated Ornstein-Uhlenbeck process
Balaena mysticetus
Thermal soaring
Biology (General)
QH301-705.5
spellingShingle Correlated velocity movement
Velocity autocovariance function
Correlated random walk
Integrated Ornstein-Uhlenbeck process
Balaena mysticetus
Thermal soaring
Biology (General)
QH301-705.5
Eliezer Gurarie
Christen H. Fleming
William F. Fagan
Kristin L. Laidre
Jesús Hernández-Pliego
Otso Ovaskainen
Correlated velocity models as a fundamental unit of animal movement: synthesis and applications
topic_facet Correlated velocity movement
Velocity autocovariance function
Correlated random walk
Integrated Ornstein-Uhlenbeck process
Balaena mysticetus
Thermal soaring
Biology (General)
QH301-705.5
description Abstract Background Continuous time movement models resolve many of the problems with scaling, sampling, and interpretation that affect discrete movement models. They can, however, be challenging to estimate, have been presented in inconsistent ways, and are not widely used. Methods We review the literature on integrated Ornstein-Uhlenbeck velocity models and propose four fundamental correlated velocity movement models (CVM’s): random, advective, rotational, and rotational-advective. The models are defined in terms of biologically meaningful speeds and time scales of autocorrelation. We summarize several approaches to estimating the models, and apply these tools for the higher order task of behavioral partitioning via change point analysis. Results An array of simulation illustrate the precision and accuracy of the estimation tools. An analysis of a swimming track of a bowhead whale (Balaena mysticetus) illustrates their robustness to irregular and sparse sampling and identifies switches between slower and faster, and directed vs. random movements. An analysis of a short flight of a lesser kestrel (Falco naumanni) identifies exact moments when switches occur between loopy, thermal soaring and directed flapping or gliding flights. Conclusions We provide tools to estimate parameters and perform change point analyses in continuous time movement models as an R package (smoove). These resources, together with the synthesis, should facilitate the wider application and development of correlated velocity models among movement ecologists.
format Article in Journal/Newspaper
author Eliezer Gurarie
Christen H. Fleming
William F. Fagan
Kristin L. Laidre
Jesús Hernández-Pliego
Otso Ovaskainen
author_facet Eliezer Gurarie
Christen H. Fleming
William F. Fagan
Kristin L. Laidre
Jesús Hernández-Pliego
Otso Ovaskainen
author_sort Eliezer Gurarie
title Correlated velocity models as a fundamental unit of animal movement: synthesis and applications
title_short Correlated velocity models as a fundamental unit of animal movement: synthesis and applications
title_full Correlated velocity models as a fundamental unit of animal movement: synthesis and applications
title_fullStr Correlated velocity models as a fundamental unit of animal movement: synthesis and applications
title_full_unstemmed Correlated velocity models as a fundamental unit of animal movement: synthesis and applications
title_sort correlated velocity models as a fundamental unit of animal movement: synthesis and applications
publisher BMC
publishDate 2017
url https://doi.org/10.1186/s40462-017-0103-3
https://doaj.org/article/a93d180dfb51438784316cb997a8bddd
genre Balaena mysticetus
bowhead whale
genre_facet Balaena mysticetus
bowhead whale
op_source Movement Ecology, Vol 5, Iss 1, Pp 1-18 (2017)
op_relation http://link.springer.com/article/10.1186/s40462-017-0103-3
https://doaj.org/toc/2051-3933
doi:10.1186/s40462-017-0103-3
2051-3933
https://doaj.org/article/a93d180dfb51438784316cb997a8bddd
op_doi https://doi.org/10.1186/s40462-017-0103-3
container_title Movement Ecology
container_volume 5
container_issue 1
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