Transcriptome Profiling of the Pacific Oyster Crassostrea gigas Visceral Ganglia over a Reproduction Cycle Identifies Novel Regulatory Peptides

The neuropeptides involved in the regulation of reproduction in the Pacific oyster ( Crassostrea gigas ) are quite diverse. To investigate this diversity, a transcriptomic survey of the visceral ganglia (VG) was carried out over an annual reproductive cycle. RNA-seq data from 26 samples correspondin...

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Published in:Marine Drugs
Main Authors: Emilie Réalis-Doyelle, Julie Schwartz, Cédric Cabau, Lorane Le Franc, Benoit Bernay, Guillaume Rivière, Christophe Klopp, Pascal Favrel
Format: Article in Journal/Newspaper
Language:English
Published: MDPI AG 2021
Subjects:
Online Access:https://doi.org/10.3390/md19080452
https://doaj.org/article/a541bd386a744488bf7b49532911d21b
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spelling ftdoajarticles:oai:doaj.org/article:a541bd386a744488bf7b49532911d21b 2023-05-15T15:57:58+02:00 Transcriptome Profiling of the Pacific Oyster Crassostrea gigas Visceral Ganglia over a Reproduction Cycle Identifies Novel Regulatory Peptides Emilie Réalis-Doyelle Julie Schwartz Cédric Cabau Lorane Le Franc Benoit Bernay Guillaume Rivière Christophe Klopp Pascal Favrel 2021-08-01T00:00:00Z https://doi.org/10.3390/md19080452 https://doaj.org/article/a541bd386a744488bf7b49532911d21b EN eng MDPI AG https://www.mdpi.com/1660-3397/19/8/452 https://doaj.org/toc/1660-3397 doi:10.3390/md19080452 1660-3397 https://doaj.org/article/a541bd386a744488bf7b49532911d21b Marine Drugs, Vol 19, Iss 452, p 452 (2021) nervous system transcriptome neuropeptides reproduction Biology (General) QH301-705.5 article 2021 ftdoajarticles https://doi.org/10.3390/md19080452 2022-12-30T20:28:11Z The neuropeptides involved in the regulation of reproduction in the Pacific oyster ( Crassostrea gigas ) are quite diverse. To investigate this diversity, a transcriptomic survey of the visceral ganglia (VG) was carried out over an annual reproductive cycle. RNA-seq data from 26 samples corresponding to VG at different stages of reproduction were de novo assembled to generate a specific reference transcriptome of the oyster nervous system and used to identify differentially expressed transcripts. Transcriptome mining led to the identification of novel neuropeptide precursors (NPPs) related to the bilaterian Eclosion Hormone (EH), crustacean female sex hormone/Interleukin 17, Nesfatin, neuroparsin/IGFBP, prokineticins, and urotensin I; to the protostome GNQQN, pleurin, prohormones 3 and 4, prothoracotropic hormones (PTTH), and QSamide/PXXXamide; to the lophotrochozoan CCWamide, CLCCY, HFAamide, and LXRX; and to the mollusk-specific NPPs CCCGS, clionin, FYFY, GNamide, GRWRN, GSWN, GWE, IWMPxxGYxx, LXRYamide, RTLFamide, SLRFamide, and WGAGamide. Among the complete repertoire of NPPs, no sex-biased expression was observed. However, 25 NPPs displayed reproduction stage-specific expression, supporting their involvement in the control of gametogenesis or associated metabolisms. Article in Journal/Newspaper Crassostrea gigas Pacific oyster Directory of Open Access Journals: DOAJ Articles Pacific Marine Drugs 19 8 452
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic nervous system
transcriptome
neuropeptides
reproduction
Biology (General)
QH301-705.5
spellingShingle nervous system
transcriptome
neuropeptides
reproduction
Biology (General)
QH301-705.5
Emilie Réalis-Doyelle
Julie Schwartz
Cédric Cabau
Lorane Le Franc
Benoit Bernay
Guillaume Rivière
Christophe Klopp
Pascal Favrel
Transcriptome Profiling of the Pacific Oyster Crassostrea gigas Visceral Ganglia over a Reproduction Cycle Identifies Novel Regulatory Peptides
topic_facet nervous system
transcriptome
neuropeptides
reproduction
Biology (General)
QH301-705.5
description The neuropeptides involved in the regulation of reproduction in the Pacific oyster ( Crassostrea gigas ) are quite diverse. To investigate this diversity, a transcriptomic survey of the visceral ganglia (VG) was carried out over an annual reproductive cycle. RNA-seq data from 26 samples corresponding to VG at different stages of reproduction were de novo assembled to generate a specific reference transcriptome of the oyster nervous system and used to identify differentially expressed transcripts. Transcriptome mining led to the identification of novel neuropeptide precursors (NPPs) related to the bilaterian Eclosion Hormone (EH), crustacean female sex hormone/Interleukin 17, Nesfatin, neuroparsin/IGFBP, prokineticins, and urotensin I; to the protostome GNQQN, pleurin, prohormones 3 and 4, prothoracotropic hormones (PTTH), and QSamide/PXXXamide; to the lophotrochozoan CCWamide, CLCCY, HFAamide, and LXRX; and to the mollusk-specific NPPs CCCGS, clionin, FYFY, GNamide, GRWRN, GSWN, GWE, IWMPxxGYxx, LXRYamide, RTLFamide, SLRFamide, and WGAGamide. Among the complete repertoire of NPPs, no sex-biased expression was observed. However, 25 NPPs displayed reproduction stage-specific expression, supporting their involvement in the control of gametogenesis or associated metabolisms.
format Article in Journal/Newspaper
author Emilie Réalis-Doyelle
Julie Schwartz
Cédric Cabau
Lorane Le Franc
Benoit Bernay
Guillaume Rivière
Christophe Klopp
Pascal Favrel
author_facet Emilie Réalis-Doyelle
Julie Schwartz
Cédric Cabau
Lorane Le Franc
Benoit Bernay
Guillaume Rivière
Christophe Klopp
Pascal Favrel
author_sort Emilie Réalis-Doyelle
title Transcriptome Profiling of the Pacific Oyster Crassostrea gigas Visceral Ganglia over a Reproduction Cycle Identifies Novel Regulatory Peptides
title_short Transcriptome Profiling of the Pacific Oyster Crassostrea gigas Visceral Ganglia over a Reproduction Cycle Identifies Novel Regulatory Peptides
title_full Transcriptome Profiling of the Pacific Oyster Crassostrea gigas Visceral Ganglia over a Reproduction Cycle Identifies Novel Regulatory Peptides
title_fullStr Transcriptome Profiling of the Pacific Oyster Crassostrea gigas Visceral Ganglia over a Reproduction Cycle Identifies Novel Regulatory Peptides
title_full_unstemmed Transcriptome Profiling of the Pacific Oyster Crassostrea gigas Visceral Ganglia over a Reproduction Cycle Identifies Novel Regulatory Peptides
title_sort transcriptome profiling of the pacific oyster crassostrea gigas visceral ganglia over a reproduction cycle identifies novel regulatory peptides
publisher MDPI AG
publishDate 2021
url https://doi.org/10.3390/md19080452
https://doaj.org/article/a541bd386a744488bf7b49532911d21b
geographic Pacific
geographic_facet Pacific
genre Crassostrea gigas
Pacific oyster
genre_facet Crassostrea gigas
Pacific oyster
op_source Marine Drugs, Vol 19, Iss 452, p 452 (2021)
op_relation https://www.mdpi.com/1660-3397/19/8/452
https://doaj.org/toc/1660-3397
doi:10.3390/md19080452
1660-3397
https://doaj.org/article/a541bd386a744488bf7b49532911d21b
op_doi https://doi.org/10.3390/md19080452
container_title Marine Drugs
container_volume 19
container_issue 8
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