Community Structures of Bacteria, Archaea, and Eukaryotic Microbes in the Freshwater Glacier Lake Yukidori-Ike in Langhovde, East Antarctica

Since most studies about community structures of microorganisms in Antarctic terrestrial lakes using molecular biological tools are mainly focused on bacteria, limited information is available about archaeal and eukaryotic microbial diversity. In this study, the biodiversity of microorganisms belong...

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Published in:Diversity
Main Authors: Aoi Chaya, Norio Kurosawa, Akinori Kawamata, Makiko Kosugi, Satoshi Imura
Format: Article in Journal/Newspaper
Language:English
Published: MDPI AG 2019
Subjects:
Online Access:https://doi.org/10.3390/d11070105
https://doaj.org/article/a1678c77a3d545cbaf481916fa671f99
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spelling ftdoajarticles:oai:doaj.org/article:a1678c77a3d545cbaf481916fa671f99 2023-05-15T14:02:16+02:00 Community Structures of Bacteria, Archaea, and Eukaryotic Microbes in the Freshwater Glacier Lake Yukidori-Ike in Langhovde, East Antarctica Aoi Chaya Norio Kurosawa Akinori Kawamata Makiko Kosugi Satoshi Imura 2019-07-01T00:00:00Z https://doi.org/10.3390/d11070105 https://doaj.org/article/a1678c77a3d545cbaf481916fa671f99 EN eng MDPI AG https://www.mdpi.com/1424-2818/11/7/105 https://doaj.org/toc/1424-2818 1424-2818 doi:10.3390/d11070105 https://doaj.org/article/a1678c77a3d545cbaf481916fa671f99 Diversity, Vol 11, Iss 7, p 105 (2019) Antarctica freshwater lake Yukidori-Ike bacteria archaea eukaryotic microorganism SSU rRNA gene clone library analysis Biology (General) QH301-705.5 article 2019 ftdoajarticles https://doi.org/10.3390/d11070105 2022-12-30T20:10:26Z Since most studies about community structures of microorganisms in Antarctic terrestrial lakes using molecular biological tools are mainly focused on bacteria, limited information is available about archaeal and eukaryotic microbial diversity. In this study, the biodiversity of microorganisms belonging to all three domains in a typical Antarctic freshwater glacier lake (Yukidori-Ike) was revealed using small subunit ribosomal RNA (SSU rRNA) clone library analysis. The bacterial clones were grouped into 102 operational taxonomic units (OTUs) and showed significant biodiversity. Betaproteobacteria were most frequently detected, followed by Cyanobacteria, Bacteroidetes, and Firmicutes as major lineages. In contrast to the bacterial diversity, much lower archaeal diversity, consisting of only two OTUs of methanogens, was observed. In the eukaryotic microbial community consisting of 20 OTUs, Tardigradal DNA was remarkably frequently detected. Genera affiliated with the phyla Ciliophora, Cryptomycota, Chlorophyta, Bacillariophyta, and Apusozoa were also detected. The biodiversity and species compositions of the whole microbial community of Lake Yukidori-Ike are similar to those of freshwater environments in temperate regions but are different from saline lakes in Antarctica, indicating that the salinity seems to affect the microbial composition more than the temperature. Article in Journal/Newspaper Antarc* Antarctic Antarctica East Antarctica Directory of Open Access Journals: DOAJ Articles Antarctic East Antarctica Langhovde ENVELOPE(39.733,39.733,-69.217,-69.217) Yukidori Ike ENVELOPE(39.769,39.769,-69.240,-69.240) Diversity 11 7 105
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Antarctica
freshwater lake
Yukidori-Ike
bacteria
archaea
eukaryotic microorganism
SSU rRNA gene
clone library analysis
Biology (General)
QH301-705.5
spellingShingle Antarctica
freshwater lake
Yukidori-Ike
bacteria
archaea
eukaryotic microorganism
SSU rRNA gene
clone library analysis
Biology (General)
QH301-705.5
Aoi Chaya
Norio Kurosawa
Akinori Kawamata
Makiko Kosugi
Satoshi Imura
Community Structures of Bacteria, Archaea, and Eukaryotic Microbes in the Freshwater Glacier Lake Yukidori-Ike in Langhovde, East Antarctica
topic_facet Antarctica
freshwater lake
Yukidori-Ike
bacteria
archaea
eukaryotic microorganism
SSU rRNA gene
clone library analysis
Biology (General)
QH301-705.5
description Since most studies about community structures of microorganisms in Antarctic terrestrial lakes using molecular biological tools are mainly focused on bacteria, limited information is available about archaeal and eukaryotic microbial diversity. In this study, the biodiversity of microorganisms belonging to all three domains in a typical Antarctic freshwater glacier lake (Yukidori-Ike) was revealed using small subunit ribosomal RNA (SSU rRNA) clone library analysis. The bacterial clones were grouped into 102 operational taxonomic units (OTUs) and showed significant biodiversity. Betaproteobacteria were most frequently detected, followed by Cyanobacteria, Bacteroidetes, and Firmicutes as major lineages. In contrast to the bacterial diversity, much lower archaeal diversity, consisting of only two OTUs of methanogens, was observed. In the eukaryotic microbial community consisting of 20 OTUs, Tardigradal DNA was remarkably frequently detected. Genera affiliated with the phyla Ciliophora, Cryptomycota, Chlorophyta, Bacillariophyta, and Apusozoa were also detected. The biodiversity and species compositions of the whole microbial community of Lake Yukidori-Ike are similar to those of freshwater environments in temperate regions but are different from saline lakes in Antarctica, indicating that the salinity seems to affect the microbial composition more than the temperature.
format Article in Journal/Newspaper
author Aoi Chaya
Norio Kurosawa
Akinori Kawamata
Makiko Kosugi
Satoshi Imura
author_facet Aoi Chaya
Norio Kurosawa
Akinori Kawamata
Makiko Kosugi
Satoshi Imura
author_sort Aoi Chaya
title Community Structures of Bacteria, Archaea, and Eukaryotic Microbes in the Freshwater Glacier Lake Yukidori-Ike in Langhovde, East Antarctica
title_short Community Structures of Bacteria, Archaea, and Eukaryotic Microbes in the Freshwater Glacier Lake Yukidori-Ike in Langhovde, East Antarctica
title_full Community Structures of Bacteria, Archaea, and Eukaryotic Microbes in the Freshwater Glacier Lake Yukidori-Ike in Langhovde, East Antarctica
title_fullStr Community Structures of Bacteria, Archaea, and Eukaryotic Microbes in the Freshwater Glacier Lake Yukidori-Ike in Langhovde, East Antarctica
title_full_unstemmed Community Structures of Bacteria, Archaea, and Eukaryotic Microbes in the Freshwater Glacier Lake Yukidori-Ike in Langhovde, East Antarctica
title_sort community structures of bacteria, archaea, and eukaryotic microbes in the freshwater glacier lake yukidori-ike in langhovde, east antarctica
publisher MDPI AG
publishDate 2019
url https://doi.org/10.3390/d11070105
https://doaj.org/article/a1678c77a3d545cbaf481916fa671f99
long_lat ENVELOPE(39.733,39.733,-69.217,-69.217)
ENVELOPE(39.769,39.769,-69.240,-69.240)
geographic Antarctic
East Antarctica
Langhovde
Yukidori Ike
geographic_facet Antarctic
East Antarctica
Langhovde
Yukidori Ike
genre Antarc*
Antarctic
Antarctica
East Antarctica
genre_facet Antarc*
Antarctic
Antarctica
East Antarctica
op_source Diversity, Vol 11, Iss 7, p 105 (2019)
op_relation https://www.mdpi.com/1424-2818/11/7/105
https://doaj.org/toc/1424-2818
1424-2818
doi:10.3390/d11070105
https://doaj.org/article/a1678c77a3d545cbaf481916fa671f99
op_doi https://doi.org/10.3390/d11070105
container_title Diversity
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