PRKG2 Splice Site Variant in Dogo Argentino Dogs with Disproportionate Dwarfism

Dwarfism phenotypes occur in many species and may be caused by genetic or environmental factors. In this study, we investigated a family of nine Dogo Argentino dogs, in which two dogs were affected by disproportionate dwarfism. Radiographs of an affected dog revealed a decreased level of endochondra...

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Published in:Genes
Main Authors: Gabriela Rudd Garces, Maria Elena Turba, Myriam Muracchini, Alessia Diana, Vidhya Jagannathan, Fabio Gentilini, Tosso Leeb
Format: Article in Journal/Newspaper
Language:English
Published: MDPI AG 2021
Subjects:
Online Access:https://doi.org/10.3390/genes12101489
https://doaj.org/article/9ed0930d757f44c296ef175c0d9b6201
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spelling ftdoajarticles:oai:doaj.org/article:9ed0930d757f44c296ef175c0d9b6201 2023-05-15T15:50:43+02:00 PRKG2 Splice Site Variant in Dogo Argentino Dogs with Disproportionate Dwarfism Gabriela Rudd Garces Maria Elena Turba Myriam Muracchini Alessia Diana Vidhya Jagannathan Fabio Gentilini Tosso Leeb 2021-09-01T00:00:00Z https://doi.org/10.3390/genes12101489 https://doaj.org/article/9ed0930d757f44c296ef175c0d9b6201 EN eng MDPI AG https://www.mdpi.com/2073-4425/12/10/1489 https://doaj.org/toc/2073-4425 doi:10.3390/genes12101489 2073-4425 https://doaj.org/article/9ed0930d757f44c296ef175c0d9b6201 Genes, Vol 12, Iss 1489, p 1489 (2021) Canis lupus familiaris linkage analysis homozygosity mapping whole genome sequencing bone growth Genetics QH426-470 article 2021 ftdoajarticles https://doi.org/10.3390/genes12101489 2022-12-31T07:30:01Z Dwarfism phenotypes occur in many species and may be caused by genetic or environmental factors. In this study, we investigated a family of nine Dogo Argentino dogs, in which two dogs were affected by disproportionate dwarfism. Radiographs of an affected dog revealed a decreased level of endochondral ossification in its growth plates, and a premature closure of the distal ulnar physes. The pedigree of the dogs presented evidence of monogenic autosomal recessive inheritance; combined linkage and homozygosity mapping assigned the most likely position of a potential genetic defect to 34 genome segments, totaling 125 Mb. The genome of an affected dog was sequenced and compared to 795 control genomes. The prioritization of private variants revealed a clear top candidate variant for the observed dwarfism. This variant, PRKG2 :XM_022413533.1:c.1634+1G>T, affects the splice donor site and is therefore predicted to disrupt the function of the PKRG2 gene encoding protein, kinase cGMP-dependent type 2, a known regulator of chondrocyte differentiation. The genotypes of the PRKG2 variant were perfectly associated with the phenotype in the studied family of dogs. PRKG2 loss-of-function variants were previously reported to cause disproportionate dwarfism in humans, cattle, mice, and rats. Together with the comparative data from other species, our data strongly suggest PRKG2 :c.1634+1G>T to be a candidate causative variant for the observed dwarfism phenotype in Dogo Argentino dogs. Article in Journal/Newspaper Canis lupus Directory of Open Access Journals: DOAJ Articles Argentino Genes 12 10 1489
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Canis lupus familiaris
linkage analysis
homozygosity mapping
whole genome sequencing
bone
growth
Genetics
QH426-470
spellingShingle Canis lupus familiaris
linkage analysis
homozygosity mapping
whole genome sequencing
bone
growth
Genetics
QH426-470
Gabriela Rudd Garces
Maria Elena Turba
Myriam Muracchini
Alessia Diana
Vidhya Jagannathan
Fabio Gentilini
Tosso Leeb
PRKG2 Splice Site Variant in Dogo Argentino Dogs with Disproportionate Dwarfism
topic_facet Canis lupus familiaris
linkage analysis
homozygosity mapping
whole genome sequencing
bone
growth
Genetics
QH426-470
description Dwarfism phenotypes occur in many species and may be caused by genetic or environmental factors. In this study, we investigated a family of nine Dogo Argentino dogs, in which two dogs were affected by disproportionate dwarfism. Radiographs of an affected dog revealed a decreased level of endochondral ossification in its growth plates, and a premature closure of the distal ulnar physes. The pedigree of the dogs presented evidence of monogenic autosomal recessive inheritance; combined linkage and homozygosity mapping assigned the most likely position of a potential genetic defect to 34 genome segments, totaling 125 Mb. The genome of an affected dog was sequenced and compared to 795 control genomes. The prioritization of private variants revealed a clear top candidate variant for the observed dwarfism. This variant, PRKG2 :XM_022413533.1:c.1634+1G>T, affects the splice donor site and is therefore predicted to disrupt the function of the PKRG2 gene encoding protein, kinase cGMP-dependent type 2, a known regulator of chondrocyte differentiation. The genotypes of the PRKG2 variant were perfectly associated with the phenotype in the studied family of dogs. PRKG2 loss-of-function variants were previously reported to cause disproportionate dwarfism in humans, cattle, mice, and rats. Together with the comparative data from other species, our data strongly suggest PRKG2 :c.1634+1G>T to be a candidate causative variant for the observed dwarfism phenotype in Dogo Argentino dogs.
format Article in Journal/Newspaper
author Gabriela Rudd Garces
Maria Elena Turba
Myriam Muracchini
Alessia Diana
Vidhya Jagannathan
Fabio Gentilini
Tosso Leeb
author_facet Gabriela Rudd Garces
Maria Elena Turba
Myriam Muracchini
Alessia Diana
Vidhya Jagannathan
Fabio Gentilini
Tosso Leeb
author_sort Gabriela Rudd Garces
title PRKG2 Splice Site Variant in Dogo Argentino Dogs with Disproportionate Dwarfism
title_short PRKG2 Splice Site Variant in Dogo Argentino Dogs with Disproportionate Dwarfism
title_full PRKG2 Splice Site Variant in Dogo Argentino Dogs with Disproportionate Dwarfism
title_fullStr PRKG2 Splice Site Variant in Dogo Argentino Dogs with Disproportionate Dwarfism
title_full_unstemmed PRKG2 Splice Site Variant in Dogo Argentino Dogs with Disproportionate Dwarfism
title_sort prkg2 splice site variant in dogo argentino dogs with disproportionate dwarfism
publisher MDPI AG
publishDate 2021
url https://doi.org/10.3390/genes12101489
https://doaj.org/article/9ed0930d757f44c296ef175c0d9b6201
geographic Argentino
geographic_facet Argentino
genre Canis lupus
genre_facet Canis lupus
op_source Genes, Vol 12, Iss 1489, p 1489 (2021)
op_relation https://www.mdpi.com/2073-4425/12/10/1489
https://doaj.org/toc/2073-4425
doi:10.3390/genes12101489
2073-4425
https://doaj.org/article/9ed0930d757f44c296ef175c0d9b6201
op_doi https://doi.org/10.3390/genes12101489
container_title Genes
container_volume 12
container_issue 10
container_start_page 1489
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