The effect of growth rate on otolith-based discrimination of cod (Gadus morhua) ecotypes.

Otolith shape has previously been used to identify ecotypes within the Icelandic cod (Gadus morhua) stock, using DST profiles to validate the results. Fish otolith shape variation has repeatedly been found to be largely determined by growth rate. To examine the effect of growth rate on the relations...

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Published in:PLOS ONE
Main Authors: Einar Pétur Jónsson, Steven E Campana, Jón Sólmundsson, Klara B Jakobsdóttir, Hlynur Bárðarson
Format: Article in Journal/Newspaper
Language:English
Published: Public Library of Science (PLoS) 2021
Subjects:
R
Q
Online Access:https://doi.org/10.1371/journal.pone.0247630
https://doaj.org/article/9e113e70b1c3466f9a952e545d9fd79d
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spelling ftdoajarticles:oai:doaj.org/article:9e113e70b1c3466f9a952e545d9fd79d 2023-05-15T16:19:01+02:00 The effect of growth rate on otolith-based discrimination of cod (Gadus morhua) ecotypes. Einar Pétur Jónsson Steven E Campana Jón Sólmundsson Klara B Jakobsdóttir Hlynur Bárðarson 2021-01-01T00:00:00Z https://doi.org/10.1371/journal.pone.0247630 https://doaj.org/article/9e113e70b1c3466f9a952e545d9fd79d EN eng Public Library of Science (PLoS) https://doi.org/10.1371/journal.pone.0247630 https://doaj.org/toc/1932-6203 1932-6203 doi:10.1371/journal.pone.0247630 https://doaj.org/article/9e113e70b1c3466f9a952e545d9fd79d PLoS ONE, Vol 16, Iss 9, p e0247630 (2021) Medicine R Science Q article 2021 ftdoajarticles https://doi.org/10.1371/journal.pone.0247630 2022-12-31T11:54:00Z Otolith shape has previously been used to identify ecotypes within the Icelandic cod (Gadus morhua) stock, using DST profiles to validate the results. Fish otolith shape variation has repeatedly been found to be largely determined by growth rate. To examine the effect of growth rate on the relationship between otolith shape and cod ecotypes (using the Pan I genotype as a proxy for ecotype), 826 archived sagittal otoliths collected over a 58 year sampling period were retrieved, the individual growth rate calculated, and otolith shape described using both Normalized Elliptic Fourier transform and Discrete Wavelet transform. Discriminant functions of otolith shape successfully classified ecotype, whether using Fourier or Wavelet descriptors, but only when excluding a heterozygous genotype from the analysis. The otolith shape variability of this genotype lowered the classification success, while otolith shape, in turn, was significantly affected by growth rate and cohort. Growth rate differences previously reported for the ecotypes were present, but were less marked than expected and indeed, growth rate variance attributable to ecotype identity was dwarfed by cohort- and location-related variance in growth. Such a strong effect of growth rate suggests that cod ecotype discrimination based on otolith shape is sensitive to both temporal and spatial variations in growth, which can mask the effect of ecotype-related growth rate differences on otolith shape. Article in Journal/Newspaper Gadus morhua Directory of Open Access Journals: DOAJ Articles PLOS ONE 16 9 e0247630
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Medicine
R
Science
Q
spellingShingle Medicine
R
Science
Q
Einar Pétur Jónsson
Steven E Campana
Jón Sólmundsson
Klara B Jakobsdóttir
Hlynur Bárðarson
The effect of growth rate on otolith-based discrimination of cod (Gadus morhua) ecotypes.
topic_facet Medicine
R
Science
Q
description Otolith shape has previously been used to identify ecotypes within the Icelandic cod (Gadus morhua) stock, using DST profiles to validate the results. Fish otolith shape variation has repeatedly been found to be largely determined by growth rate. To examine the effect of growth rate on the relationship between otolith shape and cod ecotypes (using the Pan I genotype as a proxy for ecotype), 826 archived sagittal otoliths collected over a 58 year sampling period were retrieved, the individual growth rate calculated, and otolith shape described using both Normalized Elliptic Fourier transform and Discrete Wavelet transform. Discriminant functions of otolith shape successfully classified ecotype, whether using Fourier or Wavelet descriptors, but only when excluding a heterozygous genotype from the analysis. The otolith shape variability of this genotype lowered the classification success, while otolith shape, in turn, was significantly affected by growth rate and cohort. Growth rate differences previously reported for the ecotypes were present, but were less marked than expected and indeed, growth rate variance attributable to ecotype identity was dwarfed by cohort- and location-related variance in growth. Such a strong effect of growth rate suggests that cod ecotype discrimination based on otolith shape is sensitive to both temporal and spatial variations in growth, which can mask the effect of ecotype-related growth rate differences on otolith shape.
format Article in Journal/Newspaper
author Einar Pétur Jónsson
Steven E Campana
Jón Sólmundsson
Klara B Jakobsdóttir
Hlynur Bárðarson
author_facet Einar Pétur Jónsson
Steven E Campana
Jón Sólmundsson
Klara B Jakobsdóttir
Hlynur Bárðarson
author_sort Einar Pétur Jónsson
title The effect of growth rate on otolith-based discrimination of cod (Gadus morhua) ecotypes.
title_short The effect of growth rate on otolith-based discrimination of cod (Gadus morhua) ecotypes.
title_full The effect of growth rate on otolith-based discrimination of cod (Gadus morhua) ecotypes.
title_fullStr The effect of growth rate on otolith-based discrimination of cod (Gadus morhua) ecotypes.
title_full_unstemmed The effect of growth rate on otolith-based discrimination of cod (Gadus morhua) ecotypes.
title_sort effect of growth rate on otolith-based discrimination of cod (gadus morhua) ecotypes.
publisher Public Library of Science (PLoS)
publishDate 2021
url https://doi.org/10.1371/journal.pone.0247630
https://doaj.org/article/9e113e70b1c3466f9a952e545d9fd79d
genre Gadus morhua
genre_facet Gadus morhua
op_source PLoS ONE, Vol 16, Iss 9, p e0247630 (2021)
op_relation https://doi.org/10.1371/journal.pone.0247630
https://doaj.org/toc/1932-6203
1932-6203
doi:10.1371/journal.pone.0247630
https://doaj.org/article/9e113e70b1c3466f9a952e545d9fd79d
op_doi https://doi.org/10.1371/journal.pone.0247630
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