High-throughput sequencing of fungal communities across the perennial ice block of Scărișoara Ice Cave

This survey presents the first high-throughput characterisation of fungal distribution based on ITS2 Illumina sequencing of uncultured microbiome from a 1500 years old perennial ice deposit in Scărișoara Ice Cave, Romania. Of the total of 1 751 957 ITS2 sequences, 64% corresponded to 182 fungal oper...

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Published in:Annals of Glaciology
Main Authors: Antonio Mondini, Jonathan Donhauser, Corina Itcus, Constantin Marin, Aurel Perșoiu, Paris Lavin, Beat Frey, Cristina Purcarea
Format: Article in Journal/Newspaper
Language:English
Published: Cambridge University Press 2018
Subjects:
Online Access:https://doi.org/10.1017/aog.2019.6
https://doaj.org/article/997419a013514a23858daa26e040067a
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spelling ftdoajarticles:oai:doaj.org/article:997419a013514a23858daa26e040067a 2023-05-15T13:29:32+02:00 High-throughput sequencing of fungal communities across the perennial ice block of Scărișoara Ice Cave Antonio Mondini Jonathan Donhauser Corina Itcus Constantin Marin Aurel Perșoiu Paris Lavin Beat Frey Cristina Purcarea 2018-12-01T00:00:00Z https://doi.org/10.1017/aog.2019.6 https://doaj.org/article/997419a013514a23858daa26e040067a EN eng Cambridge University Press https://www.cambridge.org/core/product/identifier/S0260305519000065/type/journal_article https://doaj.org/toc/0260-3055 https://doaj.org/toc/1727-5644 doi:10.1017/aog.2019.6 0260-3055 1727-5644 https://doaj.org/article/997419a013514a23858daa26e040067a Annals of Glaciology, Vol 59, Pp 134-146 (2018) cave ice ice and climate ice core microbiology Meteorology. Climatology QC851-999 article 2018 ftdoajarticles https://doi.org/10.1017/aog.2019.6 2023-03-12T01:31:55Z This survey presents the first high-throughput characterisation of fungal distribution based on ITS2 Illumina sequencing of uncultured microbiome from a 1500 years old perennial ice deposit in Scărișoara Ice Cave, Romania. Of the total of 1 751 957 ITS2 sequences, 64% corresponded to 182 fungal operational taxonomic units, showing a low diversity, particularly in older ice strata, and a distinct temporal distribution pattern. Ascomycota was the major phylum in all ice samples, dominating the 400 and 1500 years old ice strata deposited during the cold Little Ice Age (LIA) and Dark Ages Cold Period, while Basidiomycota was mostly present in 900-years old ice formed during the Medieval Warm Period (MWP). Chytridiomycota and Mucoromycota phyla were present in recently formed and 400-years old ice, respectively. Among the 80 identified genera, Cryptococcus victoriae, commonly found in glacial habitats, was identified in all strata. A positive correlation between fungal distribution and ice conductivity, Ca, Na and Sr concentrations was observed across the ice block, with pH values trailing climate variations during LIA and MWP, respectively. Our record highlighted the presence of a complex climate and environmental-driven fungal community in perennial ice strata accumulated during the last 1500 years in Scărișoara Ice Cave. Article in Journal/Newspaper Annals of Glaciology Cryptococcus victoriae ice core Directory of Open Access Journals: DOAJ Articles Annals of Glaciology 59 77 134 146
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic cave ice
ice and climate
ice core
microbiology
Meteorology. Climatology
QC851-999
spellingShingle cave ice
ice and climate
ice core
microbiology
Meteorology. Climatology
QC851-999
Antonio Mondini
Jonathan Donhauser
Corina Itcus
Constantin Marin
Aurel Perșoiu
Paris Lavin
Beat Frey
Cristina Purcarea
High-throughput sequencing of fungal communities across the perennial ice block of Scărișoara Ice Cave
topic_facet cave ice
ice and climate
ice core
microbiology
Meteorology. Climatology
QC851-999
description This survey presents the first high-throughput characterisation of fungal distribution based on ITS2 Illumina sequencing of uncultured microbiome from a 1500 years old perennial ice deposit in Scărișoara Ice Cave, Romania. Of the total of 1 751 957 ITS2 sequences, 64% corresponded to 182 fungal operational taxonomic units, showing a low diversity, particularly in older ice strata, and a distinct temporal distribution pattern. Ascomycota was the major phylum in all ice samples, dominating the 400 and 1500 years old ice strata deposited during the cold Little Ice Age (LIA) and Dark Ages Cold Period, while Basidiomycota was mostly present in 900-years old ice formed during the Medieval Warm Period (MWP). Chytridiomycota and Mucoromycota phyla were present in recently formed and 400-years old ice, respectively. Among the 80 identified genera, Cryptococcus victoriae, commonly found in glacial habitats, was identified in all strata. A positive correlation between fungal distribution and ice conductivity, Ca, Na and Sr concentrations was observed across the ice block, with pH values trailing climate variations during LIA and MWP, respectively. Our record highlighted the presence of a complex climate and environmental-driven fungal community in perennial ice strata accumulated during the last 1500 years in Scărișoara Ice Cave.
format Article in Journal/Newspaper
author Antonio Mondini
Jonathan Donhauser
Corina Itcus
Constantin Marin
Aurel Perșoiu
Paris Lavin
Beat Frey
Cristina Purcarea
author_facet Antonio Mondini
Jonathan Donhauser
Corina Itcus
Constantin Marin
Aurel Perșoiu
Paris Lavin
Beat Frey
Cristina Purcarea
author_sort Antonio Mondini
title High-throughput sequencing of fungal communities across the perennial ice block of Scărișoara Ice Cave
title_short High-throughput sequencing of fungal communities across the perennial ice block of Scărișoara Ice Cave
title_full High-throughput sequencing of fungal communities across the perennial ice block of Scărișoara Ice Cave
title_fullStr High-throughput sequencing of fungal communities across the perennial ice block of Scărișoara Ice Cave
title_full_unstemmed High-throughput sequencing of fungal communities across the perennial ice block of Scărișoara Ice Cave
title_sort high-throughput sequencing of fungal communities across the perennial ice block of scărișoara ice cave
publisher Cambridge University Press
publishDate 2018
url https://doi.org/10.1017/aog.2019.6
https://doaj.org/article/997419a013514a23858daa26e040067a
genre Annals of Glaciology
Cryptococcus victoriae
ice core
genre_facet Annals of Glaciology
Cryptococcus victoriae
ice core
op_source Annals of Glaciology, Vol 59, Pp 134-146 (2018)
op_relation https://www.cambridge.org/core/product/identifier/S0260305519000065/type/journal_article
https://doaj.org/toc/0260-3055
https://doaj.org/toc/1727-5644
doi:10.1017/aog.2019.6
0260-3055
1727-5644
https://doaj.org/article/997419a013514a23858daa26e040067a
op_doi https://doi.org/10.1017/aog.2019.6
container_title Annals of Glaciology
container_volume 59
container_issue 77
container_start_page 134
op_container_end_page 146
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