Reverse vaccinology and subtractive genomics approaches for identifying common therapeutics against Mycobacterium leprae and Mycobacterium lepromatosis

Abstract Background Mycobacterium leprae and Mycobacterium lepromatosis are gram-positive bacterial pathogens and the causative agents of leprosy in humans across the world. The elimination of leprosy cannot be achieved by multidrug therapy alone, and highlights the need for new tools and drugs to p...

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Published in:Journal of Venomous Animals and Toxins including Tropical Diseases
Main Authors: Arun Kumar Jaiswal, Sandeep Tiwari, Syed Babar Jamal, Letícia de Castro Oliveira, Helioswilton Sales-Campos, Leonardo Eurípedes Andrade-Silva, Carlo Jose Freire Oliveira, Preetam Ghosh, Debmalya Barh, Vasco Azevedo, Siomar C. Soares, Virmondes Rodrigues Junior, Marcos Vinicius da Silva
Format: Article in Journal/Newspaper
Language:English
Published: SciELO 2021
Subjects:
Online Access:https://doi.org/10.1590/1678-9199-jvatitd-2020-0027
https://doaj.org/article/9672328ce65249bb8a0693fe10f829a6
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spelling ftdoajarticles:oai:doaj.org/article:9672328ce65249bb8a0693fe10f829a6 2023-05-15T15:07:21+02:00 Reverse vaccinology and subtractive genomics approaches for identifying common therapeutics against Mycobacterium leprae and Mycobacterium lepromatosis Arun Kumar Jaiswal Sandeep Tiwari Syed Babar Jamal Letícia de Castro Oliveira Helioswilton Sales-Campos Leonardo Eurípedes Andrade-Silva Carlo Jose Freire Oliveira Preetam Ghosh Debmalya Barh Vasco Azevedo Siomar C. Soares Virmondes Rodrigues Junior Marcos Vinicius da Silva 2021-04-01T00:00:00Z https://doi.org/10.1590/1678-9199-jvatitd-2020-0027 https://doaj.org/article/9672328ce65249bb8a0693fe10f829a6 EN eng SciELO http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1678-91992021000100308&tlng=en http://www.scielo.br/pdf/jvatitd/v27/1678-9199-jvatitd-27-e20200027.pdf https://doaj.org/toc/1678-9199 1678-9199 doi:10.1590/1678-9199-jvatitd-2020-0027 https://doaj.org/article/9672328ce65249bb8a0693fe10f829a6 Journal of Venomous Animals and Toxins including Tropical Diseases, Vol 27 (2021) Mycobacterium leprae Mycobacterium lepromatosis Leprosy Vaccine targets Drug target identification Arctic medicine. Tropical medicine RC955-962 Toxicology. Poisons RA1190-1270 Zoology QL1-991 article 2021 ftdoajarticles https://doi.org/10.1590/1678-9199-jvatitd-2020-0027 2022-12-31T14:48:27Z Abstract Background Mycobacterium leprae and Mycobacterium lepromatosis are gram-positive bacterial pathogens and the causative agents of leprosy in humans across the world. The elimination of leprosy cannot be achieved by multidrug therapy alone, and highlights the need for new tools and drugs to prevent the emergence of new resistant strains. Methods In this study, our contribution includes the prediction of vaccine targets and new putative drugs against leprosy, using reverse vaccinology and subtractive genomics. Six strains of Mycobacterium leprae and Mycobacterium lepromatosis (4 and 2 strains, respectively) were used for comparison taking Mycobacterium leprae strain TN as the reference genome. Briefly, we used a combined reverse vaccinology and subtractive genomics approach. Results As a result, we identified 12 common putative antigenic proteins as vaccine targets and three common drug targets against Mycobacterium leprae and Mycobacterium lepromatosis. Furthermore, the docking analysis using 28 natural compounds with three drug targets was done. Conclusions The bis-naphthoquinone compound Diospyrin (CID 308140) obtained from indigenous plant Diospyros spp. showed the most favored binding affinity against predicted drug targets, which can be a candidate therapeutic target in the future against leprosy. Article in Journal/Newspaper Arctic Directory of Open Access Journals: DOAJ Articles Arctic Journal of Venomous Animals and Toxins including Tropical Diseases
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Mycobacterium leprae
Mycobacterium lepromatosis
Leprosy
Vaccine targets
Drug target identification
Arctic medicine. Tropical medicine
RC955-962
Toxicology. Poisons
RA1190-1270
Zoology
QL1-991
spellingShingle Mycobacterium leprae
Mycobacterium lepromatosis
Leprosy
Vaccine targets
Drug target identification
Arctic medicine. Tropical medicine
RC955-962
Toxicology. Poisons
RA1190-1270
Zoology
QL1-991
Arun Kumar Jaiswal
Sandeep Tiwari
Syed Babar Jamal
Letícia de Castro Oliveira
Helioswilton Sales-Campos
Leonardo Eurípedes Andrade-Silva
Carlo Jose Freire Oliveira
Preetam Ghosh
Debmalya Barh
Vasco Azevedo
Siomar C. Soares
Virmondes Rodrigues Junior
Marcos Vinicius da Silva
Reverse vaccinology and subtractive genomics approaches for identifying common therapeutics against Mycobacterium leprae and Mycobacterium lepromatosis
topic_facet Mycobacterium leprae
Mycobacterium lepromatosis
Leprosy
Vaccine targets
Drug target identification
Arctic medicine. Tropical medicine
RC955-962
Toxicology. Poisons
RA1190-1270
Zoology
QL1-991
description Abstract Background Mycobacterium leprae and Mycobacterium lepromatosis are gram-positive bacterial pathogens and the causative agents of leprosy in humans across the world. The elimination of leprosy cannot be achieved by multidrug therapy alone, and highlights the need for new tools and drugs to prevent the emergence of new resistant strains. Methods In this study, our contribution includes the prediction of vaccine targets and new putative drugs against leprosy, using reverse vaccinology and subtractive genomics. Six strains of Mycobacterium leprae and Mycobacterium lepromatosis (4 and 2 strains, respectively) were used for comparison taking Mycobacterium leprae strain TN as the reference genome. Briefly, we used a combined reverse vaccinology and subtractive genomics approach. Results As a result, we identified 12 common putative antigenic proteins as vaccine targets and three common drug targets against Mycobacterium leprae and Mycobacterium lepromatosis. Furthermore, the docking analysis using 28 natural compounds with three drug targets was done. Conclusions The bis-naphthoquinone compound Diospyrin (CID 308140) obtained from indigenous plant Diospyros spp. showed the most favored binding affinity against predicted drug targets, which can be a candidate therapeutic target in the future against leprosy.
format Article in Journal/Newspaper
author Arun Kumar Jaiswal
Sandeep Tiwari
Syed Babar Jamal
Letícia de Castro Oliveira
Helioswilton Sales-Campos
Leonardo Eurípedes Andrade-Silva
Carlo Jose Freire Oliveira
Preetam Ghosh
Debmalya Barh
Vasco Azevedo
Siomar C. Soares
Virmondes Rodrigues Junior
Marcos Vinicius da Silva
author_facet Arun Kumar Jaiswal
Sandeep Tiwari
Syed Babar Jamal
Letícia de Castro Oliveira
Helioswilton Sales-Campos
Leonardo Eurípedes Andrade-Silva
Carlo Jose Freire Oliveira
Preetam Ghosh
Debmalya Barh
Vasco Azevedo
Siomar C. Soares
Virmondes Rodrigues Junior
Marcos Vinicius da Silva
author_sort Arun Kumar Jaiswal
title Reverse vaccinology and subtractive genomics approaches for identifying common therapeutics against Mycobacterium leprae and Mycobacterium lepromatosis
title_short Reverse vaccinology and subtractive genomics approaches for identifying common therapeutics against Mycobacterium leprae and Mycobacterium lepromatosis
title_full Reverse vaccinology and subtractive genomics approaches for identifying common therapeutics against Mycobacterium leprae and Mycobacterium lepromatosis
title_fullStr Reverse vaccinology and subtractive genomics approaches for identifying common therapeutics against Mycobacterium leprae and Mycobacterium lepromatosis
title_full_unstemmed Reverse vaccinology and subtractive genomics approaches for identifying common therapeutics against Mycobacterium leprae and Mycobacterium lepromatosis
title_sort reverse vaccinology and subtractive genomics approaches for identifying common therapeutics against mycobacterium leprae and mycobacterium lepromatosis
publisher SciELO
publishDate 2021
url https://doi.org/10.1590/1678-9199-jvatitd-2020-0027
https://doaj.org/article/9672328ce65249bb8a0693fe10f829a6
geographic Arctic
geographic_facet Arctic
genre Arctic
genre_facet Arctic
op_source Journal of Venomous Animals and Toxins including Tropical Diseases, Vol 27 (2021)
op_relation http://www.scielo.br/scielo.php?script=sci_arttext&pid=S1678-91992021000100308&tlng=en
http://www.scielo.br/pdf/jvatitd/v27/1678-9199-jvatitd-27-e20200027.pdf
https://doaj.org/toc/1678-9199
1678-9199
doi:10.1590/1678-9199-jvatitd-2020-0027
https://doaj.org/article/9672328ce65249bb8a0693fe10f829a6
op_doi https://doi.org/10.1590/1678-9199-jvatitd-2020-0027
container_title Journal of Venomous Animals and Toxins including Tropical Diseases
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