Phytoplankton DNA metabarcoding in four sectors of the SW Atlantic in the context of the global ocean

The Southwest Atlantic Ocean (SWAO) is a spatially dynamic region with a remarkably high primary productivity. An exhaustive identification of the members of its phytoplankton community is a key step to understand the processes that sustain this ecosystem. Here, we provide a community composition an...

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Published in:Ecología Austral
Main Authors: Federico M. Ibarbalz, Juan J. Pierella Karlusich, Sergio Velasco Ayuso, Natalia Visintini, Lionel Guidi, Chris Bowler, Pedro Flombaum
Format: Article in Journal/Newspaper
Language:English
Spanish
Published: Asociación Argentina de Ecología 2022
Subjects:
Online Access:https://doi.org/10.25260/EA.22.32.3.0.1812
https://doaj.org/article/8f3ecbc97f8b4bfa85ff01b5c495469f
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spelling ftdoajarticles:oai:doaj.org/article:8f3ecbc97f8b4bfa85ff01b5c495469f 2023-12-10T09:53:59+01:00 Phytoplankton DNA metabarcoding in four sectors of the SW Atlantic in the context of the global ocean Federico M. Ibarbalz Juan J. Pierella Karlusich Sergio Velasco Ayuso Natalia Visintini Lionel Guidi Chris Bowler Pedro Flombaum 2022-09-01T00:00:00Z https://doi.org/10.25260/EA.22.32.3.0.1812 https://doaj.org/article/8f3ecbc97f8b4bfa85ff01b5c495469f EN ES eng spa Asociación Argentina de Ecología https://ojs.ecologiaaustral.com.ar/index.php/Ecologia_Austral/article/view/1812 https://doaj.org/toc/0327-5477 https://doaj.org/toc/1667-782X doi:10.25260/EA.22.32.3.0.1812 0327-5477 1667-782X https://doaj.org/article/8f3ecbc97f8b4bfa85ff01b5c495469f Ecología Austral, Vol 32, Iss 3 (2022) phytoplankton Southwest Atlantic Ocean primary productivity biodiversity 18S rRNA gene Environmental sciences GE1-350 Ecology QH540-549.5 article 2022 ftdoajarticles https://doi.org/10.25260/EA.22.32.3.0.1812 2023-11-12T01:37:17Z The Southwest Atlantic Ocean (SWAO) is a spatially dynamic region with a remarkably high primary productivity. An exhaustive identification of the members of its phytoplankton community is a key step to understand the processes that sustain this ecosystem. Here, we provide a community composition analysis of eukaryotic phytoplankton in four SWAO sectors. We gathered 18S rRNA gene metabarcoding data and complemented it with confocal microscopy images, both from the Tara Oceans expedition in late spring 2010. Our work showed local and regional variation across three different size fractions that reflect the complexity of this region. Diversity decreased along temperature and latitudinal gradients, but also showed intricate patterns of occurrences across samples, suggesting that multiple factors shape the community structure. Samples resembled communities from other temperate regions and showed an increasing influence by cold waters from the Southern Ocean towards higher latitudes. These results complement previous regional studies that used other methods such as microscopy or pigment analysis. Our study contributes to the beginning of genomic-based surveys of plankton communities in the SW Atlantic and calls for further work in the region to enhance ecosystem monitoring and projections in the context of global change. Ph: Marin LE ROUX (polaRYSE - Fondation Tara Ocean) Article in Journal/Newspaper Southern Ocean Directory of Open Access Journals: DOAJ Articles Southern Ocean Ecología Austral 32 3 835 848
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
Spanish
topic phytoplankton
Southwest Atlantic Ocean
primary productivity
biodiversity
18S rRNA gene
Environmental sciences
GE1-350
Ecology
QH540-549.5
spellingShingle phytoplankton
Southwest Atlantic Ocean
primary productivity
biodiversity
18S rRNA gene
Environmental sciences
GE1-350
Ecology
QH540-549.5
Federico M. Ibarbalz
Juan J. Pierella Karlusich
Sergio Velasco Ayuso
Natalia Visintini
Lionel Guidi
Chris Bowler
Pedro Flombaum
Phytoplankton DNA metabarcoding in four sectors of the SW Atlantic in the context of the global ocean
topic_facet phytoplankton
Southwest Atlantic Ocean
primary productivity
biodiversity
18S rRNA gene
Environmental sciences
GE1-350
Ecology
QH540-549.5
description The Southwest Atlantic Ocean (SWAO) is a spatially dynamic region with a remarkably high primary productivity. An exhaustive identification of the members of its phytoplankton community is a key step to understand the processes that sustain this ecosystem. Here, we provide a community composition analysis of eukaryotic phytoplankton in four SWAO sectors. We gathered 18S rRNA gene metabarcoding data and complemented it with confocal microscopy images, both from the Tara Oceans expedition in late spring 2010. Our work showed local and regional variation across three different size fractions that reflect the complexity of this region. Diversity decreased along temperature and latitudinal gradients, but also showed intricate patterns of occurrences across samples, suggesting that multiple factors shape the community structure. Samples resembled communities from other temperate regions and showed an increasing influence by cold waters from the Southern Ocean towards higher latitudes. These results complement previous regional studies that used other methods such as microscopy or pigment analysis. Our study contributes to the beginning of genomic-based surveys of plankton communities in the SW Atlantic and calls for further work in the region to enhance ecosystem monitoring and projections in the context of global change. Ph: Marin LE ROUX (polaRYSE - Fondation Tara Ocean)
format Article in Journal/Newspaper
author Federico M. Ibarbalz
Juan J. Pierella Karlusich
Sergio Velasco Ayuso
Natalia Visintini
Lionel Guidi
Chris Bowler
Pedro Flombaum
author_facet Federico M. Ibarbalz
Juan J. Pierella Karlusich
Sergio Velasco Ayuso
Natalia Visintini
Lionel Guidi
Chris Bowler
Pedro Flombaum
author_sort Federico M. Ibarbalz
title Phytoplankton DNA metabarcoding in four sectors of the SW Atlantic in the context of the global ocean
title_short Phytoplankton DNA metabarcoding in four sectors of the SW Atlantic in the context of the global ocean
title_full Phytoplankton DNA metabarcoding in four sectors of the SW Atlantic in the context of the global ocean
title_fullStr Phytoplankton DNA metabarcoding in four sectors of the SW Atlantic in the context of the global ocean
title_full_unstemmed Phytoplankton DNA metabarcoding in four sectors of the SW Atlantic in the context of the global ocean
title_sort phytoplankton dna metabarcoding in four sectors of the sw atlantic in the context of the global ocean
publisher Asociación Argentina de Ecología
publishDate 2022
url https://doi.org/10.25260/EA.22.32.3.0.1812
https://doaj.org/article/8f3ecbc97f8b4bfa85ff01b5c495469f
geographic Southern Ocean
geographic_facet Southern Ocean
genre Southern Ocean
genre_facet Southern Ocean
op_source Ecología Austral, Vol 32, Iss 3 (2022)
op_relation https://ojs.ecologiaaustral.com.ar/index.php/Ecologia_Austral/article/view/1812
https://doaj.org/toc/0327-5477
https://doaj.org/toc/1667-782X
doi:10.25260/EA.22.32.3.0.1812
0327-5477
1667-782X
https://doaj.org/article/8f3ecbc97f8b4bfa85ff01b5c495469f
op_doi https://doi.org/10.25260/EA.22.32.3.0.1812
container_title Ecología Austral
container_volume 32
container_issue 3
container_start_page 835
op_container_end_page 848
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