Phytoplankton DNA metabarcoding in four sectors of the SW Atlantic in the context of the global ocean
The Southwest Atlantic Ocean (SWAO) is a spatially dynamic region with a remarkably high primary productivity. An exhaustive identification of the members of its phytoplankton community is a key step to understand the processes that sustain this ecosystem. Here, we provide a community composition an...
Published in: | Ecología Austral |
---|---|
Main Authors: | , , , , , , |
Format: | Article in Journal/Newspaper |
Language: | English Spanish |
Published: |
Asociación Argentina de Ecología
2022
|
Subjects: | |
Online Access: | https://doi.org/10.25260/EA.22.32.3.0.1812 https://doaj.org/article/8f3ecbc97f8b4bfa85ff01b5c495469f |
id |
ftdoajarticles:oai:doaj.org/article:8f3ecbc97f8b4bfa85ff01b5c495469f |
---|---|
record_format |
openpolar |
spelling |
ftdoajarticles:oai:doaj.org/article:8f3ecbc97f8b4bfa85ff01b5c495469f 2023-12-10T09:53:59+01:00 Phytoplankton DNA metabarcoding in four sectors of the SW Atlantic in the context of the global ocean Federico M. Ibarbalz Juan J. Pierella Karlusich Sergio Velasco Ayuso Natalia Visintini Lionel Guidi Chris Bowler Pedro Flombaum 2022-09-01T00:00:00Z https://doi.org/10.25260/EA.22.32.3.0.1812 https://doaj.org/article/8f3ecbc97f8b4bfa85ff01b5c495469f EN ES eng spa Asociación Argentina de Ecología https://ojs.ecologiaaustral.com.ar/index.php/Ecologia_Austral/article/view/1812 https://doaj.org/toc/0327-5477 https://doaj.org/toc/1667-782X doi:10.25260/EA.22.32.3.0.1812 0327-5477 1667-782X https://doaj.org/article/8f3ecbc97f8b4bfa85ff01b5c495469f Ecología Austral, Vol 32, Iss 3 (2022) phytoplankton Southwest Atlantic Ocean primary productivity biodiversity 18S rRNA gene Environmental sciences GE1-350 Ecology QH540-549.5 article 2022 ftdoajarticles https://doi.org/10.25260/EA.22.32.3.0.1812 2023-11-12T01:37:17Z The Southwest Atlantic Ocean (SWAO) is a spatially dynamic region with a remarkably high primary productivity. An exhaustive identification of the members of its phytoplankton community is a key step to understand the processes that sustain this ecosystem. Here, we provide a community composition analysis of eukaryotic phytoplankton in four SWAO sectors. We gathered 18S rRNA gene metabarcoding data and complemented it with confocal microscopy images, both from the Tara Oceans expedition in late spring 2010. Our work showed local and regional variation across three different size fractions that reflect the complexity of this region. Diversity decreased along temperature and latitudinal gradients, but also showed intricate patterns of occurrences across samples, suggesting that multiple factors shape the community structure. Samples resembled communities from other temperate regions and showed an increasing influence by cold waters from the Southern Ocean towards higher latitudes. These results complement previous regional studies that used other methods such as microscopy or pigment analysis. Our study contributes to the beginning of genomic-based surveys of plankton communities in the SW Atlantic and calls for further work in the region to enhance ecosystem monitoring and projections in the context of global change. Ph: Marin LE ROUX (polaRYSE - Fondation Tara Ocean) Article in Journal/Newspaper Southern Ocean Directory of Open Access Journals: DOAJ Articles Southern Ocean Ecología Austral 32 3 835 848 |
institution |
Open Polar |
collection |
Directory of Open Access Journals: DOAJ Articles |
op_collection_id |
ftdoajarticles |
language |
English Spanish |
topic |
phytoplankton Southwest Atlantic Ocean primary productivity biodiversity 18S rRNA gene Environmental sciences GE1-350 Ecology QH540-549.5 |
spellingShingle |
phytoplankton Southwest Atlantic Ocean primary productivity biodiversity 18S rRNA gene Environmental sciences GE1-350 Ecology QH540-549.5 Federico M. Ibarbalz Juan J. Pierella Karlusich Sergio Velasco Ayuso Natalia Visintini Lionel Guidi Chris Bowler Pedro Flombaum Phytoplankton DNA metabarcoding in four sectors of the SW Atlantic in the context of the global ocean |
topic_facet |
phytoplankton Southwest Atlantic Ocean primary productivity biodiversity 18S rRNA gene Environmental sciences GE1-350 Ecology QH540-549.5 |
description |
The Southwest Atlantic Ocean (SWAO) is a spatially dynamic region with a remarkably high primary productivity. An exhaustive identification of the members of its phytoplankton community is a key step to understand the processes that sustain this ecosystem. Here, we provide a community composition analysis of eukaryotic phytoplankton in four SWAO sectors. We gathered 18S rRNA gene metabarcoding data and complemented it with confocal microscopy images, both from the Tara Oceans expedition in late spring 2010. Our work showed local and regional variation across three different size fractions that reflect the complexity of this region. Diversity decreased along temperature and latitudinal gradients, but also showed intricate patterns of occurrences across samples, suggesting that multiple factors shape the community structure. Samples resembled communities from other temperate regions and showed an increasing influence by cold waters from the Southern Ocean towards higher latitudes. These results complement previous regional studies that used other methods such as microscopy or pigment analysis. Our study contributes to the beginning of genomic-based surveys of plankton communities in the SW Atlantic and calls for further work in the region to enhance ecosystem monitoring and projections in the context of global change. Ph: Marin LE ROUX (polaRYSE - Fondation Tara Ocean) |
format |
Article in Journal/Newspaper |
author |
Federico M. Ibarbalz Juan J. Pierella Karlusich Sergio Velasco Ayuso Natalia Visintini Lionel Guidi Chris Bowler Pedro Flombaum |
author_facet |
Federico M. Ibarbalz Juan J. Pierella Karlusich Sergio Velasco Ayuso Natalia Visintini Lionel Guidi Chris Bowler Pedro Flombaum |
author_sort |
Federico M. Ibarbalz |
title |
Phytoplankton DNA metabarcoding in four sectors of the SW Atlantic in the context of the global ocean |
title_short |
Phytoplankton DNA metabarcoding in four sectors of the SW Atlantic in the context of the global ocean |
title_full |
Phytoplankton DNA metabarcoding in four sectors of the SW Atlantic in the context of the global ocean |
title_fullStr |
Phytoplankton DNA metabarcoding in four sectors of the SW Atlantic in the context of the global ocean |
title_full_unstemmed |
Phytoplankton DNA metabarcoding in four sectors of the SW Atlantic in the context of the global ocean |
title_sort |
phytoplankton dna metabarcoding in four sectors of the sw atlantic in the context of the global ocean |
publisher |
Asociación Argentina de Ecología |
publishDate |
2022 |
url |
https://doi.org/10.25260/EA.22.32.3.0.1812 https://doaj.org/article/8f3ecbc97f8b4bfa85ff01b5c495469f |
geographic |
Southern Ocean |
geographic_facet |
Southern Ocean |
genre |
Southern Ocean |
genre_facet |
Southern Ocean |
op_source |
Ecología Austral, Vol 32, Iss 3 (2022) |
op_relation |
https://ojs.ecologiaaustral.com.ar/index.php/Ecologia_Austral/article/view/1812 https://doaj.org/toc/0327-5477 https://doaj.org/toc/1667-782X doi:10.25260/EA.22.32.3.0.1812 0327-5477 1667-782X https://doaj.org/article/8f3ecbc97f8b4bfa85ff01b5c495469f |
op_doi |
https://doi.org/10.25260/EA.22.32.3.0.1812 |
container_title |
Ecología Austral |
container_volume |
32 |
container_issue |
3 |
container_start_page |
835 |
op_container_end_page |
848 |
_version_ |
1784901181885120512 |