The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae)
Zannichellia palustris Linnaeus 1753 is a cosmopolitan submerged species capable of rapidly responding to environmental changes, with potential applications in the ecological treatment of heavy metal pollution in water bodies. This study aimed to characterize the complete chloroplast genome of Z. pa...
Published in: | Mitochondrial DNA Part B |
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Taylor & Francis Group
2023
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Online Access: | https://doi.org/10.1080/23802359.2023.2209216 https://doaj.org/article/8cd299510f3a47e29c3d790588cea636 |
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ftdoajarticles:oai:doaj.org/article:8cd299510f3a47e29c3d790588cea636 2023-12-03T10:31:44+01:00 The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae) Lei Huang Xinwei Xu 2023-05-01T00:00:00Z https://doi.org/10.1080/23802359.2023.2209216 https://doaj.org/article/8cd299510f3a47e29c3d790588cea636 EN eng Taylor & Francis Group http://dx.doi.org/10.1080/23802359.2023.2209216 https://doaj.org/toc/2380-2359 2380-2359 doi:10.1080/23802359.2023.2209216 https://doaj.org/article/8cd299510f3a47e29c3d790588cea636 Mitochondrial DNA. Part B. Resources, Vol 8, Iss 5, Pp 546-549 (2023) chloroplast genome phylogenetic analysis zannichellia palustris Genetics QH426-470 article 2023 ftdoajarticles https://doi.org/10.1080/23802359.2023.2209216 2023-11-05T01:36:13Z Zannichellia palustris Linnaeus 1753 is a cosmopolitan submerged species capable of rapidly responding to environmental changes, with potential applications in the ecological treatment of heavy metal pollution in water bodies. This study aimed to characterize the complete chloroplast genome of Z. palustris, which has not been reported previously. The chloroplast genome of Z. palustris displays a quadripartite structure with a length of 155,262 base pairs (bp), comprising a large single copy (LSC) region of 85,397 bp, a small single copy (SSC) region of 18,057 bp, and a pair of inverted repeat (IR) regions of 25,904 bp. The GC content of the genome is 35.8%, with corresponding values of 33.4% for the LSC, 28.2% for the SSC, and 42.5% for the IR regions. The genome contained 130 genes, including 85 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analysis within the order Alismatales revealed that Z. palustris clusters with the clade of Potamogeton perfoliatus, P. crispus and Stuckenia pectinata. Article in Journal/Newspaper Zannichellia palustris Directory of Open Access Journals: DOAJ Articles Mitochondrial DNA Part B 8 5 546 549 |
institution |
Open Polar |
collection |
Directory of Open Access Journals: DOAJ Articles |
op_collection_id |
ftdoajarticles |
language |
English |
topic |
chloroplast genome phylogenetic analysis zannichellia palustris Genetics QH426-470 |
spellingShingle |
chloroplast genome phylogenetic analysis zannichellia palustris Genetics QH426-470 Lei Huang Xinwei Xu The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae) |
topic_facet |
chloroplast genome phylogenetic analysis zannichellia palustris Genetics QH426-470 |
description |
Zannichellia palustris Linnaeus 1753 is a cosmopolitan submerged species capable of rapidly responding to environmental changes, with potential applications in the ecological treatment of heavy metal pollution in water bodies. This study aimed to characterize the complete chloroplast genome of Z. palustris, which has not been reported previously. The chloroplast genome of Z. palustris displays a quadripartite structure with a length of 155,262 base pairs (bp), comprising a large single copy (LSC) region of 85,397 bp, a small single copy (SSC) region of 18,057 bp, and a pair of inverted repeat (IR) regions of 25,904 bp. The GC content of the genome is 35.8%, with corresponding values of 33.4% for the LSC, 28.2% for the SSC, and 42.5% for the IR regions. The genome contained 130 genes, including 85 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analysis within the order Alismatales revealed that Z. palustris clusters with the clade of Potamogeton perfoliatus, P. crispus and Stuckenia pectinata. |
format |
Article in Journal/Newspaper |
author |
Lei Huang Xinwei Xu |
author_facet |
Lei Huang Xinwei Xu |
author_sort |
Lei Huang |
title |
The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae) |
title_short |
The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae) |
title_full |
The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae) |
title_fullStr |
The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae) |
title_full_unstemmed |
The complete chloroplast genome sequence of Zannichellia palustris (Potamogetonaceae) |
title_sort |
complete chloroplast genome sequence of zannichellia palustris (potamogetonaceae) |
publisher |
Taylor & Francis Group |
publishDate |
2023 |
url |
https://doi.org/10.1080/23802359.2023.2209216 https://doaj.org/article/8cd299510f3a47e29c3d790588cea636 |
genre |
Zannichellia palustris |
genre_facet |
Zannichellia palustris |
op_source |
Mitochondrial DNA. Part B. Resources, Vol 8, Iss 5, Pp 546-549 (2023) |
op_relation |
http://dx.doi.org/10.1080/23802359.2023.2209216 https://doaj.org/toc/2380-2359 2380-2359 doi:10.1080/23802359.2023.2209216 https://doaj.org/article/8cd299510f3a47e29c3d790588cea636 |
op_doi |
https://doi.org/10.1080/23802359.2023.2209216 |
container_title |
Mitochondrial DNA Part B |
container_volume |
8 |
container_issue |
5 |
container_start_page |
546 |
op_container_end_page |
549 |
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1784258192550658048 |