Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems

Nucleocytoplasmic large DNA viruses (NCLDVs) infect various marine eukaryotes. However, little is known about NCLDV diversity and their relationships with eukaryotic hosts in marine environments, the elucidation of which will advance the current understanding of marine ecosystems. This study charact...

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Published in:Microorganisms
Main Authors: Kang Eun Kim, Hyoung Min Joo, Taek-Kyun Lee, Hyun-Jung Kim, Yu Jin Kim, Bo Kyung Kim, Sun-Yong Ha, Seung Won Jung
Format: Article in Journal/Newspaper
Language:English
Published: MDPI AG 2023
Subjects:
Online Access:https://doi.org/10.3390/microorganisms11010169
https://doaj.org/article/8c91c133866c4ff49c002fec631a3017
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spelling ftdoajarticles:oai:doaj.org/article:8c91c133866c4ff49c002fec631a3017 2023-05-15T14:49:19+02:00 Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems Kang Eun Kim Hyoung Min Joo Taek-Kyun Lee Hyun-Jung Kim Yu Jin Kim Bo Kyung Kim Sun-Yong Ha Seung Won Jung 2023-01-01T00:00:00Z https://doi.org/10.3390/microorganisms11010169 https://doaj.org/article/8c91c133866c4ff49c002fec631a3017 EN eng MDPI AG https://www.mdpi.com/2076-2607/11/1/169 https://doaj.org/toc/2076-2607 doi:10.3390/microorganisms11010169 2076-2607 https://doaj.org/article/8c91c133866c4ff49c002fec631a3017 Microorganisms, Vol 11, Iss 169, p 169 (2023) Aureococcus anophagefferens eukaryotic plankton communities Gyrodinium helveticum metagenomics nucleocytoplasmic large DNA viruses sub-arctic sea Biology (General) QH301-705.5 article 2023 ftdoajarticles https://doi.org/10.3390/microorganisms11010169 2023-01-22T01:26:47Z Nucleocytoplasmic large DNA viruses (NCLDVs) infect various marine eukaryotes. However, little is known about NCLDV diversity and their relationships with eukaryotic hosts in marine environments, the elucidation of which will advance the current understanding of marine ecosystems. This study characterizes the interplay between NCLDVs and the eukaryotic plankton community (EPC) in the sub-Arctic area using metagenomics and metabarcoding to investigate NCLDVs and EPC, respectively, in the Kongsfjorden ecosystem of Svalbard (Norway) in April and June 2018. Gyrodinium helveticum (Dinophyceae) is the most prevalent eukaryotic taxon in the EPC in April, during which time Mimiviridae (31.8%), Poxviridae (25.1%), Phycodnaviridae (14.7%) and Pandoraviridae (13.1%) predominate. However, in June, the predominant taxon is Aureococcus anophagefferens (Pelagophyceae), and the NCLDVs, Poxviridae (32.9%), Mimiviridae (29.1%), and Phycodnaviridae (18.5%) appear in higher proportions with an increase in Pelagophyceae, Bacillariophyceae, and Chlorophyta groups. Thus, differences in NCLDVs may be caused by changes in EPC composition in response to environmental changes, such as increases in water temperature and light intensity. Taken together, these findings are particularly relevant considering the anticipated impact of NCLDV-induced EPC control mechanisms on polar regions and, therefore, improve the understanding of the Sub-Arctic Kongsfjorden ecosystem. Article in Journal/Newspaper Arctic Kongsfjord* Kongsfjorden Svalbard Directory of Open Access Journals: DOAJ Articles Arctic Svalbard Norway Microorganisms 11 1 169
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Aureococcus anophagefferens
eukaryotic plankton communities
Gyrodinium helveticum
metagenomics
nucleocytoplasmic large DNA viruses
sub-arctic sea
Biology (General)
QH301-705.5
spellingShingle Aureococcus anophagefferens
eukaryotic plankton communities
Gyrodinium helveticum
metagenomics
nucleocytoplasmic large DNA viruses
sub-arctic sea
Biology (General)
QH301-705.5
Kang Eun Kim
Hyoung Min Joo
Taek-Kyun Lee
Hyun-Jung Kim
Yu Jin Kim
Bo Kyung Kim
Sun-Yong Ha
Seung Won Jung
Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems
topic_facet Aureococcus anophagefferens
eukaryotic plankton communities
Gyrodinium helveticum
metagenomics
nucleocytoplasmic large DNA viruses
sub-arctic sea
Biology (General)
QH301-705.5
description Nucleocytoplasmic large DNA viruses (NCLDVs) infect various marine eukaryotes. However, little is known about NCLDV diversity and their relationships with eukaryotic hosts in marine environments, the elucidation of which will advance the current understanding of marine ecosystems. This study characterizes the interplay between NCLDVs and the eukaryotic plankton community (EPC) in the sub-Arctic area using metagenomics and metabarcoding to investigate NCLDVs and EPC, respectively, in the Kongsfjorden ecosystem of Svalbard (Norway) in April and June 2018. Gyrodinium helveticum (Dinophyceae) is the most prevalent eukaryotic taxon in the EPC in April, during which time Mimiviridae (31.8%), Poxviridae (25.1%), Phycodnaviridae (14.7%) and Pandoraviridae (13.1%) predominate. However, in June, the predominant taxon is Aureococcus anophagefferens (Pelagophyceae), and the NCLDVs, Poxviridae (32.9%), Mimiviridae (29.1%), and Phycodnaviridae (18.5%) appear in higher proportions with an increase in Pelagophyceae, Bacillariophyceae, and Chlorophyta groups. Thus, differences in NCLDVs may be caused by changes in EPC composition in response to environmental changes, such as increases in water temperature and light intensity. Taken together, these findings are particularly relevant considering the anticipated impact of NCLDV-induced EPC control mechanisms on polar regions and, therefore, improve the understanding of the Sub-Arctic Kongsfjorden ecosystem.
format Article in Journal/Newspaper
author Kang Eun Kim
Hyoung Min Joo
Taek-Kyun Lee
Hyun-Jung Kim
Yu Jin Kim
Bo Kyung Kim
Sun-Yong Ha
Seung Won Jung
author_facet Kang Eun Kim
Hyoung Min Joo
Taek-Kyun Lee
Hyun-Jung Kim
Yu Jin Kim
Bo Kyung Kim
Sun-Yong Ha
Seung Won Jung
author_sort Kang Eun Kim
title Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems
title_short Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems
title_full Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems
title_fullStr Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems
title_full_unstemmed Covariance of Marine Nucleocytoplasmic Large DNA Viruses with Eukaryotic Plankton Communities in the Sub-Arctic Kongsfjorden Ecosystem: A Metagenomic Analysis of Marine Microbial Ecosystems
title_sort covariance of marine nucleocytoplasmic large dna viruses with eukaryotic plankton communities in the sub-arctic kongsfjorden ecosystem: a metagenomic analysis of marine microbial ecosystems
publisher MDPI AG
publishDate 2023
url https://doi.org/10.3390/microorganisms11010169
https://doaj.org/article/8c91c133866c4ff49c002fec631a3017
geographic Arctic
Svalbard
Norway
geographic_facet Arctic
Svalbard
Norway
genre Arctic
Kongsfjord*
Kongsfjorden
Svalbard
genre_facet Arctic
Kongsfjord*
Kongsfjorden
Svalbard
op_source Microorganisms, Vol 11, Iss 169, p 169 (2023)
op_relation https://www.mdpi.com/2076-2607/11/1/169
https://doaj.org/toc/2076-2607
doi:10.3390/microorganisms11010169
2076-2607
https://doaj.org/article/8c91c133866c4ff49c002fec631a3017
op_doi https://doi.org/10.3390/microorganisms11010169
container_title Microorganisms
container_volume 11
container_issue 1
container_start_page 169
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