A scalability study of the Ice-sheet and Sea-level System Model (ISSM, version 4.18)

Accurately modelling the contribution of Greenland and Antarctica to sea level rise requires solving partial differential equations at a high spatial resolution. In this paper, we discuss the scaling of the Ice-sheet and Sea-level System Model (ISSM) applied to the Greenland Ice Sheet with horizonta...

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Published in:Geoscientific Model Development
Main Authors: Y. Fischler, M. Rückamp, C. Bischof, V. Aizinger, M. Morlighem, A. Humbert
Format: Article in Journal/Newspaper
Language:English
Published: Copernicus Publications 2022
Subjects:
Online Access:https://doi.org/10.5194/gmd-15-3753-2022
https://doaj.org/article/8b2cb4dbd5f5437a8b19c9f803377400
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spelling ftdoajarticles:oai:doaj.org/article:8b2cb4dbd5f5437a8b19c9f803377400 2023-05-15T14:01:03+02:00 A scalability study of the Ice-sheet and Sea-level System Model (ISSM, version 4.18) Y. Fischler M. Rückamp C. Bischof V. Aizinger M. Morlighem A. Humbert 2022-05-01T00:00:00Z https://doi.org/10.5194/gmd-15-3753-2022 https://doaj.org/article/8b2cb4dbd5f5437a8b19c9f803377400 EN eng Copernicus Publications https://gmd.copernicus.org/articles/15/3753/2022/gmd-15-3753-2022.pdf https://doaj.org/toc/1991-959X https://doaj.org/toc/1991-9603 doi:10.5194/gmd-15-3753-2022 1991-959X 1991-9603 https://doaj.org/article/8b2cb4dbd5f5437a8b19c9f803377400 Geoscientific Model Development, Vol 15, Pp 3753-3771 (2022) Geology QE1-996.5 article 2022 ftdoajarticles https://doi.org/10.5194/gmd-15-3753-2022 2022-12-30T22:37:47Z Accurately modelling the contribution of Greenland and Antarctica to sea level rise requires solving partial differential equations at a high spatial resolution. In this paper, we discuss the scaling of the Ice-sheet and Sea-level System Model (ISSM) applied to the Greenland Ice Sheet with horizontal grid resolutions varying between 10 and 0.25 km. The model setup used as benchmark problem comprises a variety of modules with different levels of complexity and computational demands. The core builds the so-called stress balance module, which uses the higher-order approximation (or Blatter–Pattyn) of the Stokes equations, including free surface and ice-front evolution as well as thermodynamics in form of an enthalpy balance, and a mesh of linear prismatic finite elements, to compute the ice flow. We develop a detailed user-oriented, yet low-overhead, performance instrumentation tailored to the requirements of Earth system models and run scaling tests up to 6144 Message Passing Interface (MPI) processes. The results show that the computation of the Greenland model scales overall well up to 3072 MPI processes but is eventually slowed down by matrix assembly, the output handling and lower-dimensional problems that employ lower numbers of unknowns per MPI process. We also discuss improvements of the scaling and identify further improvements needed for climate research. The instrumented version of ISSM thus not only identifies potential performance bottlenecks that were not present at lower core counts but also provides the capability to continually monitor the performance of ISSM code basis. This is of long-term significance as the overall performance of ISSM model depends on the subtle interplay between algorithms, their implementation, underlying libraries, compilers, runtime systems and hardware characteristics, all of which are in a constant state of flux. We believe that future large-scale high-performance computing (HPC) systems will continue to employ the MPI-based programming paradigm on the road to exascale. ... Article in Journal/Newspaper Antarc* Antarctica Greenland Ice Sheet Directory of Open Access Journals: DOAJ Articles Greenland Geoscientific Model Development 15 9 3753 3771
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Geology
QE1-996.5
spellingShingle Geology
QE1-996.5
Y. Fischler
M. Rückamp
C. Bischof
V. Aizinger
M. Morlighem
A. Humbert
A scalability study of the Ice-sheet and Sea-level System Model (ISSM, version 4.18)
topic_facet Geology
QE1-996.5
description Accurately modelling the contribution of Greenland and Antarctica to sea level rise requires solving partial differential equations at a high spatial resolution. In this paper, we discuss the scaling of the Ice-sheet and Sea-level System Model (ISSM) applied to the Greenland Ice Sheet with horizontal grid resolutions varying between 10 and 0.25 km. The model setup used as benchmark problem comprises a variety of modules with different levels of complexity and computational demands. The core builds the so-called stress balance module, which uses the higher-order approximation (or Blatter–Pattyn) of the Stokes equations, including free surface and ice-front evolution as well as thermodynamics in form of an enthalpy balance, and a mesh of linear prismatic finite elements, to compute the ice flow. We develop a detailed user-oriented, yet low-overhead, performance instrumentation tailored to the requirements of Earth system models and run scaling tests up to 6144 Message Passing Interface (MPI) processes. The results show that the computation of the Greenland model scales overall well up to 3072 MPI processes but is eventually slowed down by matrix assembly, the output handling and lower-dimensional problems that employ lower numbers of unknowns per MPI process. We also discuss improvements of the scaling and identify further improvements needed for climate research. The instrumented version of ISSM thus not only identifies potential performance bottlenecks that were not present at lower core counts but also provides the capability to continually monitor the performance of ISSM code basis. This is of long-term significance as the overall performance of ISSM model depends on the subtle interplay between algorithms, their implementation, underlying libraries, compilers, runtime systems and hardware characteristics, all of which are in a constant state of flux. We believe that future large-scale high-performance computing (HPC) systems will continue to employ the MPI-based programming paradigm on the road to exascale. ...
format Article in Journal/Newspaper
author Y. Fischler
M. Rückamp
C. Bischof
V. Aizinger
M. Morlighem
A. Humbert
author_facet Y. Fischler
M. Rückamp
C. Bischof
V. Aizinger
M. Morlighem
A. Humbert
author_sort Y. Fischler
title A scalability study of the Ice-sheet and Sea-level System Model (ISSM, version 4.18)
title_short A scalability study of the Ice-sheet and Sea-level System Model (ISSM, version 4.18)
title_full A scalability study of the Ice-sheet and Sea-level System Model (ISSM, version 4.18)
title_fullStr A scalability study of the Ice-sheet and Sea-level System Model (ISSM, version 4.18)
title_full_unstemmed A scalability study of the Ice-sheet and Sea-level System Model (ISSM, version 4.18)
title_sort scalability study of the ice-sheet and sea-level system model (issm, version 4.18)
publisher Copernicus Publications
publishDate 2022
url https://doi.org/10.5194/gmd-15-3753-2022
https://doaj.org/article/8b2cb4dbd5f5437a8b19c9f803377400
geographic Greenland
geographic_facet Greenland
genre Antarc*
Antarctica
Greenland
Ice Sheet
genre_facet Antarc*
Antarctica
Greenland
Ice Sheet
op_source Geoscientific Model Development, Vol 15, Pp 3753-3771 (2022)
op_relation https://gmd.copernicus.org/articles/15/3753/2022/gmd-15-3753-2022.pdf
https://doaj.org/toc/1991-959X
https://doaj.org/toc/1991-9603
doi:10.5194/gmd-15-3753-2022
1991-959X
1991-9603
https://doaj.org/article/8b2cb4dbd5f5437a8b19c9f803377400
op_doi https://doi.org/10.5194/gmd-15-3753-2022
container_title Geoscientific Model Development
container_volume 15
container_issue 9
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