Changes of the bacterial abundance and communities in shallow ice cores from Dunde and Muztagata glaciers, Tibetan Plateau

In this study, six bacterial community structures were analyzed from the Dunde ice core (9.5-m-long) using 16S rRNA gene cloning library technology. Compared to the Muztagata mountain ice core (37-m-long), the Dunde ice core has different dominant community structures, with five genus related groups...

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Published in:Frontiers in Microbiology
Main Authors: Yong Chen, Xiang-Kai Li, Jing Si, Guang-Jian Wu, Li-De Tian, Shu-Rong Xiang
Format: Article in Journal/Newspaper
Language:English
Published: Frontiers Media S.A. 2016
Subjects:
Online Access:https://doi.org/10.3389/fmicb.2016.01716
https://doaj.org/article/84829cc7acab444cb8584aee4f6d1708
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spelling ftdoajarticles:oai:doaj.org/article:84829cc7acab444cb8584aee4f6d1708 2023-05-15T16:38:42+02:00 Changes of the bacterial abundance and communities in shallow ice cores from Dunde and Muztagata glaciers, Tibetan Plateau Yong Chen Xiang-Kai Li Jing Si Guang-Jian Wu Li-De Tian Shu-Rong Xiang 2016-11-01T00:00:00Z https://doi.org/10.3389/fmicb.2016.01716 https://doaj.org/article/84829cc7acab444cb8584aee4f6d1708 EN eng Frontiers Media S.A. http://journal.frontiersin.org/Journal/10.3389/fmicb.2016.01716/full https://doaj.org/toc/1664-302X 1664-302X doi:10.3389/fmicb.2016.01716 https://doaj.org/article/84829cc7acab444cb8584aee4f6d1708 Frontiers in Microbiology, Vol 7 (2016) Glacier Tibet Plateau Taxonomic group micro-biogeography live cell density Microbiology QR1-502 article 2016 ftdoajarticles https://doi.org/10.3389/fmicb.2016.01716 2022-12-30T21:51:22Z In this study, six bacterial community structures were analyzed from the Dunde ice core (9.5-m-long) using 16S rRNA gene cloning library technology. Compared to the Muztagata mountain ice core (37-m-long), the Dunde ice core has different dominant community structures, with five genus related groups Blastococcus sp./Propionibacterium, Cryobacterium-related., Flavobacterium sp., Pedobacter sp., and Polaromas sp. that are frequently found in the six tested ice layers from 1990 to 2000. Live and total microbial density patterns were examined and related to the dynamics of physical-chemical parameters, mineral particle concentrations and stable isotopic ratios in the precipitations collected from both Muztagata and Dunde ice cores. The Muztagata ice core revealed seasonal response patterns for both live and total cell density, with high cell density occurring in the warming spring and summer months indicated by the proxy value of the stable isotopic ratios. Seasonal analysis of live cell density for the Dunde ice core was not successful due to the limitations of sampling resolution. Both ice cores showed that the cell density peaks were frequently associated with high concentrations of particles. A comparison of microbial communities in the Dunde and Muztagata glaciers showed that similar taxonomic members exist in the related ice cores, but the composition of the prevalent genus-related groups is largely different between the two geographically different glaciers. This indicates that the micro-biogeography associated with geographic differences was mainly influenced by a few dominant taxonomic groups. Key words: live cell density, taxonomic group, micro-biogeography, glacier, Tibet Plateau Article in Journal/Newspaper ice core Directory of Open Access Journals: DOAJ Articles Frontiers in Microbiology 7
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Glacier
Tibet Plateau
Taxonomic group
micro-biogeography
live cell density
Microbiology
QR1-502
spellingShingle Glacier
Tibet Plateau
Taxonomic group
micro-biogeography
live cell density
Microbiology
QR1-502
Yong Chen
Xiang-Kai Li
Jing Si
Guang-Jian Wu
Li-De Tian
Shu-Rong Xiang
Changes of the bacterial abundance and communities in shallow ice cores from Dunde and Muztagata glaciers, Tibetan Plateau
topic_facet Glacier
Tibet Plateau
Taxonomic group
micro-biogeography
live cell density
Microbiology
QR1-502
description In this study, six bacterial community structures were analyzed from the Dunde ice core (9.5-m-long) using 16S rRNA gene cloning library technology. Compared to the Muztagata mountain ice core (37-m-long), the Dunde ice core has different dominant community structures, with five genus related groups Blastococcus sp./Propionibacterium, Cryobacterium-related., Flavobacterium sp., Pedobacter sp., and Polaromas sp. that are frequently found in the six tested ice layers from 1990 to 2000. Live and total microbial density patterns were examined and related to the dynamics of physical-chemical parameters, mineral particle concentrations and stable isotopic ratios in the precipitations collected from both Muztagata and Dunde ice cores. The Muztagata ice core revealed seasonal response patterns for both live and total cell density, with high cell density occurring in the warming spring and summer months indicated by the proxy value of the stable isotopic ratios. Seasonal analysis of live cell density for the Dunde ice core was not successful due to the limitations of sampling resolution. Both ice cores showed that the cell density peaks were frequently associated with high concentrations of particles. A comparison of microbial communities in the Dunde and Muztagata glaciers showed that similar taxonomic members exist in the related ice cores, but the composition of the prevalent genus-related groups is largely different between the two geographically different glaciers. This indicates that the micro-biogeography associated with geographic differences was mainly influenced by a few dominant taxonomic groups. Key words: live cell density, taxonomic group, micro-biogeography, glacier, Tibet Plateau
format Article in Journal/Newspaper
author Yong Chen
Xiang-Kai Li
Jing Si
Guang-Jian Wu
Li-De Tian
Shu-Rong Xiang
author_facet Yong Chen
Xiang-Kai Li
Jing Si
Guang-Jian Wu
Li-De Tian
Shu-Rong Xiang
author_sort Yong Chen
title Changes of the bacterial abundance and communities in shallow ice cores from Dunde and Muztagata glaciers, Tibetan Plateau
title_short Changes of the bacterial abundance and communities in shallow ice cores from Dunde and Muztagata glaciers, Tibetan Plateau
title_full Changes of the bacterial abundance and communities in shallow ice cores from Dunde and Muztagata glaciers, Tibetan Plateau
title_fullStr Changes of the bacterial abundance and communities in shallow ice cores from Dunde and Muztagata glaciers, Tibetan Plateau
title_full_unstemmed Changes of the bacterial abundance and communities in shallow ice cores from Dunde and Muztagata glaciers, Tibetan Plateau
title_sort changes of the bacterial abundance and communities in shallow ice cores from dunde and muztagata glaciers, tibetan plateau
publisher Frontiers Media S.A.
publishDate 2016
url https://doi.org/10.3389/fmicb.2016.01716
https://doaj.org/article/84829cc7acab444cb8584aee4f6d1708
genre ice core
genre_facet ice core
op_source Frontiers in Microbiology, Vol 7 (2016)
op_relation http://journal.frontiersin.org/Journal/10.3389/fmicb.2016.01716/full
https://doaj.org/toc/1664-302X
1664-302X
doi:10.3389/fmicb.2016.01716
https://doaj.org/article/84829cc7acab444cb8584aee4f6d1708
op_doi https://doi.org/10.3389/fmicb.2016.01716
container_title Frontiers in Microbiology
container_volume 7
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