Diversity and assembly processes of microbial eukaryotic communities in Fildes Peninsula Lakes (West Antarctica)

The diversity, co-occurrence patterns, and assembly processes of microbial eukaryotes (0.2–20 µ m) in Antarctic freshwater lakes are not well understood, despite their wide distribution and ecological importance. This study used Illumina high-throughput sequencing to investigate the microbial eukary...

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Published in:Biogeosciences
Main Authors: C. Zhang, H. Li, Y. Zeng, H. Ding, B. Wang, Y. Li, Z. Ji, Y. Bi, W. Luo
Format: Article in Journal/Newspaper
Language:English
Published: Copernicus Publications 2022
Subjects:
Online Access:https://doi.org/10.5194/bg-19-4639-2022
https://doaj.org/article/8232b8d313c643119a8c1616b0a2b0cf
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spelling ftdoajarticles:oai:doaj.org/article:8232b8d313c643119a8c1616b0a2b0cf 2023-05-15T13:34:52+02:00 Diversity and assembly processes of microbial eukaryotic communities in Fildes Peninsula Lakes (West Antarctica) C. Zhang H. Li Y. Zeng H. Ding B. Wang Y. Li Z. Ji Y. Bi W. Luo 2022-09-01T00:00:00Z https://doi.org/10.5194/bg-19-4639-2022 https://doaj.org/article/8232b8d313c643119a8c1616b0a2b0cf EN eng Copernicus Publications https://bg.copernicus.org/articles/19/4639/2022/bg-19-4639-2022.pdf https://doaj.org/toc/1726-4170 https://doaj.org/toc/1726-4189 doi:10.5194/bg-19-4639-2022 1726-4170 1726-4189 https://doaj.org/article/8232b8d313c643119a8c1616b0a2b0cf Biogeosciences, Vol 19, Pp 4639-4654 (2022) Ecology QH540-549.5 Life QH501-531 Geology QE1-996.5 article 2022 ftdoajarticles https://doi.org/10.5194/bg-19-4639-2022 2022-12-30T19:57:20Z The diversity, co-occurrence patterns, and assembly processes of microbial eukaryotes (0.2–20 µ m) in Antarctic freshwater lakes are not well understood, despite their wide distribution and ecological importance. This study used Illumina high-throughput sequencing to investigate the microbial eukaryotic communities of five freshwater lakes on the Fildes Peninsula over three summer seasons. A total of 28 phyla were detected, with phytoplankton occupying the highest percentage of sequences (accounting for up to 98 %). The dominant taxa consisted of Chrysophyta, Chlorophyta, and Cryptophyta. The species richness (113–268) and Shannon index (1.70–3.50) varied among the lakes, with higher values recorded in Lake Chang Hu and Lake Kitec and the lowest value obtained for Lake Yue Ya. There were significant differences between the microbial eukaryotic communities of the lakes, with spatial and temporal heterogeneity in the relative abundance of the dominant taxa ( P <0.05 ). Environmental variables explained about 39 % of the variation in community structures, with water temperature and phosphate identified as the driving factors ( P <0.05 ). Network analysis revealed comprehensive co-occurrence relationships (positive correlation 82 % vs. negative correlation 18 %). The neutral community model revealed that neutral processes explained more than 55 % of the community variation. Stochastic processes (e.g. homogenizing dispersal and undominated processes) predominated in community assembly over the deterministic processes. These findings demonstrate the diversity of the microbial eukaryotic communities in the freshwater lakes of the Fildes Peninsula and have important implications for understanding the community assembly in these ecosystems. Article in Journal/Newspaper Antarc* Antarctic Antarctica West Antarctica Directory of Open Access Journals: DOAJ Articles Antarctic West Antarctica Fildes ENVELOPE(-58.817,-58.817,-62.217,-62.217) Fildes peninsula ENVELOPE(-58.948,-58.948,-62.182,-62.182) Biogeosciences 19 18 4639 4654
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Ecology
QH540-549.5
Life
QH501-531
Geology
QE1-996.5
spellingShingle Ecology
QH540-549.5
Life
QH501-531
Geology
QE1-996.5
C. Zhang
H. Li
Y. Zeng
H. Ding
B. Wang
Y. Li
Z. Ji
Y. Bi
W. Luo
Diversity and assembly processes of microbial eukaryotic communities in Fildes Peninsula Lakes (West Antarctica)
topic_facet Ecology
QH540-549.5
Life
QH501-531
Geology
QE1-996.5
description The diversity, co-occurrence patterns, and assembly processes of microbial eukaryotes (0.2–20 µ m) in Antarctic freshwater lakes are not well understood, despite their wide distribution and ecological importance. This study used Illumina high-throughput sequencing to investigate the microbial eukaryotic communities of five freshwater lakes on the Fildes Peninsula over three summer seasons. A total of 28 phyla were detected, with phytoplankton occupying the highest percentage of sequences (accounting for up to 98 %). The dominant taxa consisted of Chrysophyta, Chlorophyta, and Cryptophyta. The species richness (113–268) and Shannon index (1.70–3.50) varied among the lakes, with higher values recorded in Lake Chang Hu and Lake Kitec and the lowest value obtained for Lake Yue Ya. There were significant differences between the microbial eukaryotic communities of the lakes, with spatial and temporal heterogeneity in the relative abundance of the dominant taxa ( P <0.05 ). Environmental variables explained about 39 % of the variation in community structures, with water temperature and phosphate identified as the driving factors ( P <0.05 ). Network analysis revealed comprehensive co-occurrence relationships (positive correlation 82 % vs. negative correlation 18 %). The neutral community model revealed that neutral processes explained more than 55 % of the community variation. Stochastic processes (e.g. homogenizing dispersal and undominated processes) predominated in community assembly over the deterministic processes. These findings demonstrate the diversity of the microbial eukaryotic communities in the freshwater lakes of the Fildes Peninsula and have important implications for understanding the community assembly in these ecosystems.
format Article in Journal/Newspaper
author C. Zhang
H. Li
Y. Zeng
H. Ding
B. Wang
Y. Li
Z. Ji
Y. Bi
W. Luo
author_facet C. Zhang
H. Li
Y. Zeng
H. Ding
B. Wang
Y. Li
Z. Ji
Y. Bi
W. Luo
author_sort C. Zhang
title Diversity and assembly processes of microbial eukaryotic communities in Fildes Peninsula Lakes (West Antarctica)
title_short Diversity and assembly processes of microbial eukaryotic communities in Fildes Peninsula Lakes (West Antarctica)
title_full Diversity and assembly processes of microbial eukaryotic communities in Fildes Peninsula Lakes (West Antarctica)
title_fullStr Diversity and assembly processes of microbial eukaryotic communities in Fildes Peninsula Lakes (West Antarctica)
title_full_unstemmed Diversity and assembly processes of microbial eukaryotic communities in Fildes Peninsula Lakes (West Antarctica)
title_sort diversity and assembly processes of microbial eukaryotic communities in fildes peninsula lakes (west antarctica)
publisher Copernicus Publications
publishDate 2022
url https://doi.org/10.5194/bg-19-4639-2022
https://doaj.org/article/8232b8d313c643119a8c1616b0a2b0cf
long_lat ENVELOPE(-58.817,-58.817,-62.217,-62.217)
ENVELOPE(-58.948,-58.948,-62.182,-62.182)
geographic Antarctic
West Antarctica
Fildes
Fildes peninsula
geographic_facet Antarctic
West Antarctica
Fildes
Fildes peninsula
genre Antarc*
Antarctic
Antarctica
West Antarctica
genre_facet Antarc*
Antarctic
Antarctica
West Antarctica
op_source Biogeosciences, Vol 19, Pp 4639-4654 (2022)
op_relation https://bg.copernicus.org/articles/19/4639/2022/bg-19-4639-2022.pdf
https://doaj.org/toc/1726-4170
https://doaj.org/toc/1726-4189
doi:10.5194/bg-19-4639-2022
1726-4170
1726-4189
https://doaj.org/article/8232b8d313c643119a8c1616b0a2b0cf
op_doi https://doi.org/10.5194/bg-19-4639-2022
container_title Biogeosciences
container_volume 19
container_issue 18
container_start_page 4639
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