Soil bacterial community structure, metabolic adaptations and their functional interactions to abiotic factors in Antarctica

Antarctica features one of the most ancient, largest glacier reserves and the most pristine environment left on the earth. However, in last few decade disturbances due to industrialization and release of greenhouse gases have led to serious consequences such as melting of polar ice sheets, changing...

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Main Authors: Kunal Jani, Anoop Mahajan, Swapnil Kajale, Aditee Ashar, Avinash Sharma
Format: Article in Journal/Newspaper
Language:English
Published: Polish Academy of Sciences 2021
Subjects:
Online Access:https://doi.org/10.24425/ppr.2021.138588
https://doaj.org/article/7e67e7fe224c4d128c99814ed86efb53
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spelling ftdoajarticles:oai:doaj.org/article:7e67e7fe224c4d128c99814ed86efb53 2023-05-15T13:40:17+02:00 Soil bacterial community structure, metabolic adaptations and their functional interactions to abiotic factors in Antarctica Kunal Jani Anoop Mahajan Swapnil Kajale Aditee Ashar Avinash Sharma 2021-09-01T00:00:00Z https://doi.org/10.24425/ppr.2021.138588 https://doaj.org/article/7e67e7fe224c4d128c99814ed86efb53 EN eng Polish Academy of Sciences https://journals.pan.pl/Content/120895/PDF/2022-01-PPR-02-Jani.pdf https://doaj.org/toc/0138-0338 https://doaj.org/toc/2081-8262 0138-0338 2081-8262 https://doi.org/10.24425/ppr.2021.138588 https://doaj.org/article/7e67e7fe224c4d128c99814ed86efb53 Polish Polar Research, Vol vol. 43, Iss No 1, Pp 21-36 (2021) antarctica uv radiations adaption strategies extreme environments dna repair Geology QE1-996.5 article 2021 ftdoajarticles https://doi.org/10.24425/ppr.2021.138588 2022-12-31T00:46:47Z Antarctica features one of the most ancient, largest glacier reserves and the most pristine environment left on the earth. However, in last few decade disturbances due to industrialization and release of greenhouse gases have led to serious consequences such as melting of polar ice sheets, changing atmospheric chemistry and ozone depletion. Here, we use high-throughput sequencing to understand the impact of subtle changes in environmental parameters on bacterial communities. We observed dominance of Cyanobacteria (41.93%) followed by Bacteroidetes (14.8%), Acidobacteria (13.35%), Proteobacteria (9.67%), Actinobacteria (7.79%), Firmicutes (3.46%) among all the samples collected every alternate day for 20 days. Additionally, metagenomic imputations revealed higher abundance of gene families associated with DNA repair and carotenoid biosynthesis enabling bacterial communities to resist and function under the high UV radiations. We further observed bacterial communities are dependent on the single carbon metabolism as a strategy for nutrient uptake in such nutrient deprived conditions. Article in Journal/Newspaper Antarc* Antarctica Polar Research Directory of Open Access Journals: DOAJ Articles
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic antarctica
uv radiations
adaption strategies
extreme environments
dna repair
Geology
QE1-996.5
spellingShingle antarctica
uv radiations
adaption strategies
extreme environments
dna repair
Geology
QE1-996.5
Kunal Jani
Anoop Mahajan
Swapnil Kajale
Aditee Ashar
Avinash Sharma
Soil bacterial community structure, metabolic adaptations and their functional interactions to abiotic factors in Antarctica
topic_facet antarctica
uv radiations
adaption strategies
extreme environments
dna repair
Geology
QE1-996.5
description Antarctica features one of the most ancient, largest glacier reserves and the most pristine environment left on the earth. However, in last few decade disturbances due to industrialization and release of greenhouse gases have led to serious consequences such as melting of polar ice sheets, changing atmospheric chemistry and ozone depletion. Here, we use high-throughput sequencing to understand the impact of subtle changes in environmental parameters on bacterial communities. We observed dominance of Cyanobacteria (41.93%) followed by Bacteroidetes (14.8%), Acidobacteria (13.35%), Proteobacteria (9.67%), Actinobacteria (7.79%), Firmicutes (3.46%) among all the samples collected every alternate day for 20 days. Additionally, metagenomic imputations revealed higher abundance of gene families associated with DNA repair and carotenoid biosynthesis enabling bacterial communities to resist and function under the high UV radiations. We further observed bacterial communities are dependent on the single carbon metabolism as a strategy for nutrient uptake in such nutrient deprived conditions.
format Article in Journal/Newspaper
author Kunal Jani
Anoop Mahajan
Swapnil Kajale
Aditee Ashar
Avinash Sharma
author_facet Kunal Jani
Anoop Mahajan
Swapnil Kajale
Aditee Ashar
Avinash Sharma
author_sort Kunal Jani
title Soil bacterial community structure, metabolic adaptations and their functional interactions to abiotic factors in Antarctica
title_short Soil bacterial community structure, metabolic adaptations and their functional interactions to abiotic factors in Antarctica
title_full Soil bacterial community structure, metabolic adaptations and their functional interactions to abiotic factors in Antarctica
title_fullStr Soil bacterial community structure, metabolic adaptations and their functional interactions to abiotic factors in Antarctica
title_full_unstemmed Soil bacterial community structure, metabolic adaptations and their functional interactions to abiotic factors in Antarctica
title_sort soil bacterial community structure, metabolic adaptations and their functional interactions to abiotic factors in antarctica
publisher Polish Academy of Sciences
publishDate 2021
url https://doi.org/10.24425/ppr.2021.138588
https://doaj.org/article/7e67e7fe224c4d128c99814ed86efb53
genre Antarc*
Antarctica
Polar Research
genre_facet Antarc*
Antarctica
Polar Research
op_source Polish Polar Research, Vol vol. 43, Iss No 1, Pp 21-36 (2021)
op_relation https://journals.pan.pl/Content/120895/PDF/2022-01-PPR-02-Jani.pdf
https://doaj.org/toc/0138-0338
https://doaj.org/toc/2081-8262
0138-0338
2081-8262
https://doi.org/10.24425/ppr.2021.138588
https://doaj.org/article/7e67e7fe224c4d128c99814ed86efb53
op_doi https://doi.org/10.24425/ppr.2021.138588
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