Ecology of Alpine Macrofungi - Combining Historical with Recent Data

Historical datasets of living communities are important because they can be used to document creeping shifts in species compositions. Such a historical data set exists for alpine fungi. From 1941 to 1953, the Swiss geologist Jules Favre visited yearly the region of the Swiss National Park and record...

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Published in:Frontiers in Microbiology
Main Authors: Ivano Brunner, Beat Frey, Martin Hartmann, Stephan Zimmermann, Frank Graf, Laura M. Suz, Tuula Niskanen, Martin I. Bidartondo, Beatrice Senn-Irlet
Format: Article in Journal/Newspaper
Language:English
Published: Frontiers Media S.A. 2017
Subjects:
Online Access:https://doi.org/10.3389/fmicb.2017.02066
https://doaj.org/article/792efc46eb2f43fcb94b0bd41cfe6dfc
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spelling ftdoajarticles:oai:doaj.org/article:792efc46eb2f43fcb94b0bd41cfe6dfc 2023-05-15T16:02:44+02:00 Ecology of Alpine Macrofungi - Combining Historical with Recent Data Ivano Brunner Beat Frey Martin Hartmann Stephan Zimmermann Frank Graf Laura M. Suz Tuula Niskanen Martin I. Bidartondo Beatrice Senn-Irlet 2017-10-01T00:00:00Z https://doi.org/10.3389/fmicb.2017.02066 https://doaj.org/article/792efc46eb2f43fcb94b0bd41cfe6dfc EN eng Frontiers Media S.A. http://journal.frontiersin.org/article/10.3389/fmicb.2017.02066/full https://doaj.org/toc/1664-302X 1664-302X doi:10.3389/fmicb.2017.02066 https://doaj.org/article/792efc46eb2f43fcb94b0bd41cfe6dfc Frontiers in Microbiology, Vol 8 (2017) Dryas octopetala fungal communities ectomycorrhiza Salix herbacea Salix reticulata Salix retusa Microbiology QR1-502 article 2017 ftdoajarticles https://doi.org/10.3389/fmicb.2017.02066 2022-12-31T05:17:51Z Historical datasets of living communities are important because they can be used to document creeping shifts in species compositions. Such a historical data set exists for alpine fungi. From 1941 to 1953, the Swiss geologist Jules Favre visited yearly the region of the Swiss National Park and recorded the occurring fruiting bodies of fungi >1 mm (so-called “macrofungi”) in the alpine zone. Favre can be regarded as one of the pioneers of alpine fungal ecology not least because he noted location, elevation, geology, and associated plants during his numerous excursions. However, some relevant information is only available in his unpublished field-book. Overall, Favre listed 204 fungal species in 26 sampling sites, with 46 species being previously unknown. The analysis of his data revealed that the macrofungi recorded belong to two major ecological groups, either they are symbiotrophs and live in ectomycorrhizal associations with alpine plant hosts, or they are saprotrophs and decompose plant litter and soil organic matter. The most frequent fungi were members of Inocybe and Cortinarius, which form ectomycorrhizas with Dryas octopetala or the dwarf alpine Salix species. The scope of the present study was to combine Favre's historical dataset with more recent data, either with the “SwissFungi” database or with data from major studies of the French and German Alps, and with the data from novel high-throughput DNA sequencing techniques of soils from the Swiss Alps. Results of the latter application revealed, that problems associated with these new techniques are manifold and species determination remains often unclear. At this point, the fungal taxa collected by Favre and deposited as exsiccata at the “Conservatoire et Jardin Botaniques de la Ville de Genève” could be used as a reference sequence dataset for alpine fungal studies. In conclusion, it can be postulated that new improved databases are urgently necessary for the near future, particularly, with regard to investigating fungal communities from alpine ... Article in Journal/Newspaper Dryas octopetala Salix herbacea Directory of Open Access Journals: DOAJ Articles Jules ENVELOPE(140.917,140.917,-66.742,-66.742) Frontiers in Microbiology 8
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Dryas octopetala
fungal communities
ectomycorrhiza
Salix herbacea
Salix reticulata
Salix retusa
Microbiology
QR1-502
spellingShingle Dryas octopetala
fungal communities
ectomycorrhiza
Salix herbacea
Salix reticulata
Salix retusa
Microbiology
QR1-502
Ivano Brunner
Beat Frey
Martin Hartmann
Stephan Zimmermann
Frank Graf
Laura M. Suz
Tuula Niskanen
Martin I. Bidartondo
Beatrice Senn-Irlet
Ecology of Alpine Macrofungi - Combining Historical with Recent Data
topic_facet Dryas octopetala
fungal communities
ectomycorrhiza
Salix herbacea
Salix reticulata
Salix retusa
Microbiology
QR1-502
description Historical datasets of living communities are important because they can be used to document creeping shifts in species compositions. Such a historical data set exists for alpine fungi. From 1941 to 1953, the Swiss geologist Jules Favre visited yearly the region of the Swiss National Park and recorded the occurring fruiting bodies of fungi >1 mm (so-called “macrofungi”) in the alpine zone. Favre can be regarded as one of the pioneers of alpine fungal ecology not least because he noted location, elevation, geology, and associated plants during his numerous excursions. However, some relevant information is only available in his unpublished field-book. Overall, Favre listed 204 fungal species in 26 sampling sites, with 46 species being previously unknown. The analysis of his data revealed that the macrofungi recorded belong to two major ecological groups, either they are symbiotrophs and live in ectomycorrhizal associations with alpine plant hosts, or they are saprotrophs and decompose plant litter and soil organic matter. The most frequent fungi were members of Inocybe and Cortinarius, which form ectomycorrhizas with Dryas octopetala or the dwarf alpine Salix species. The scope of the present study was to combine Favre's historical dataset with more recent data, either with the “SwissFungi” database or with data from major studies of the French and German Alps, and with the data from novel high-throughput DNA sequencing techniques of soils from the Swiss Alps. Results of the latter application revealed, that problems associated with these new techniques are manifold and species determination remains often unclear. At this point, the fungal taxa collected by Favre and deposited as exsiccata at the “Conservatoire et Jardin Botaniques de la Ville de Genève” could be used as a reference sequence dataset for alpine fungal studies. In conclusion, it can be postulated that new improved databases are urgently necessary for the near future, particularly, with regard to investigating fungal communities from alpine ...
format Article in Journal/Newspaper
author Ivano Brunner
Beat Frey
Martin Hartmann
Stephan Zimmermann
Frank Graf
Laura M. Suz
Tuula Niskanen
Martin I. Bidartondo
Beatrice Senn-Irlet
author_facet Ivano Brunner
Beat Frey
Martin Hartmann
Stephan Zimmermann
Frank Graf
Laura M. Suz
Tuula Niskanen
Martin I. Bidartondo
Beatrice Senn-Irlet
author_sort Ivano Brunner
title Ecology of Alpine Macrofungi - Combining Historical with Recent Data
title_short Ecology of Alpine Macrofungi - Combining Historical with Recent Data
title_full Ecology of Alpine Macrofungi - Combining Historical with Recent Data
title_fullStr Ecology of Alpine Macrofungi - Combining Historical with Recent Data
title_full_unstemmed Ecology of Alpine Macrofungi - Combining Historical with Recent Data
title_sort ecology of alpine macrofungi - combining historical with recent data
publisher Frontiers Media S.A.
publishDate 2017
url https://doi.org/10.3389/fmicb.2017.02066
https://doaj.org/article/792efc46eb2f43fcb94b0bd41cfe6dfc
long_lat ENVELOPE(140.917,140.917,-66.742,-66.742)
geographic Jules
geographic_facet Jules
genre Dryas octopetala
Salix herbacea
genre_facet Dryas octopetala
Salix herbacea
op_source Frontiers in Microbiology, Vol 8 (2017)
op_relation http://journal.frontiersin.org/article/10.3389/fmicb.2017.02066/full
https://doaj.org/toc/1664-302X
1664-302X
doi:10.3389/fmicb.2017.02066
https://doaj.org/article/792efc46eb2f43fcb94b0bd41cfe6dfc
op_doi https://doi.org/10.3389/fmicb.2017.02066
container_title Frontiers in Microbiology
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