DenHunt - A Comprehensive Database of the Intricate Network of Dengue-Human Interactions.

Dengue virus (DENV) is a human pathogen and its etiology has been widely established. There are many interactions between DENV and human proteins that have been reported in literature. However, no publicly accessible resource for efficiently retrieving the information is yet available. In this study...

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Published in:PLOS Neglected Tropical Diseases
Main Authors: Prashanthi Karyala, Rahul Metri, Christopher Bathula, Syam K Yelamanchi, Lipika Sahoo, Selvam Arjunan, Narayan P Sastri, Nagasuma Chandra
Format: Article in Journal/Newspaper
Language:English
Published: Public Library of Science (PLoS) 2016
Subjects:
Online Access:https://doi.org/10.1371/journal.pntd.0004965
https://doaj.org/article/785a2b1ad3424b91916cd61c83bfb53c
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spelling ftdoajarticles:oai:doaj.org/article:785a2b1ad3424b91916cd61c83bfb53c 2023-05-15T15:07:36+02:00 DenHunt - A Comprehensive Database of the Intricate Network of Dengue-Human Interactions. Prashanthi Karyala Rahul Metri Christopher Bathula Syam K Yelamanchi Lipika Sahoo Selvam Arjunan Narayan P Sastri Nagasuma Chandra 2016-09-01T00:00:00Z https://doi.org/10.1371/journal.pntd.0004965 https://doaj.org/article/785a2b1ad3424b91916cd61c83bfb53c EN eng Public Library of Science (PLoS) http://europepmc.org/articles/PMC5019383?pdf=render https://doaj.org/toc/1935-2727 https://doaj.org/toc/1935-2735 1935-2727 1935-2735 doi:10.1371/journal.pntd.0004965 https://doaj.org/article/785a2b1ad3424b91916cd61c83bfb53c PLoS Neglected Tropical Diseases, Vol 10, Iss 9, p e0004965 (2016) Arctic medicine. Tropical medicine RC955-962 Public aspects of medicine RA1-1270 article 2016 ftdoajarticles https://doi.org/10.1371/journal.pntd.0004965 2022-12-31T02:11:25Z Dengue virus (DENV) is a human pathogen and its etiology has been widely established. There are many interactions between DENV and human proteins that have been reported in literature. However, no publicly accessible resource for efficiently retrieving the information is yet available. In this study, we mined all publicly available dengue-human interactions that have been reported in the literature into a database called DenHunt. We retrieved 682 direct interactions of human proteins with dengue viral components, 382 indirect interactions and 4120 differentially expressed human genes in dengue infected cell lines and patients. We have illustrated the importance of DenHunt by mapping the dengue-human interactions on to the host interactome and observed that the virus targets multiple host functional complexes of important cellular processes such as metabolism, immune system and signaling pathways suggesting a potential role of these interactions in viral pathogenesis. We also observed that 7 percent of the dengue virus interacting human proteins are also associated with other infectious and non-infectious diseases. Finally, the understanding that comes from such analyses could be used to design better strategies to counteract the diseases caused by dengue virus. The whole dataset has been catalogued in a searchable database, called DenHunt (http://proline.biochem.iisc.ernet.in/DenHunt/). Article in Journal/Newspaper Arctic Directory of Open Access Journals: DOAJ Articles Arctic PLOS Neglected Tropical Diseases 10 9 e0004965
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Arctic medicine. Tropical medicine
RC955-962
Public aspects of medicine
RA1-1270
spellingShingle Arctic medicine. Tropical medicine
RC955-962
Public aspects of medicine
RA1-1270
Prashanthi Karyala
Rahul Metri
Christopher Bathula
Syam K Yelamanchi
Lipika Sahoo
Selvam Arjunan
Narayan P Sastri
Nagasuma Chandra
DenHunt - A Comprehensive Database of the Intricate Network of Dengue-Human Interactions.
topic_facet Arctic medicine. Tropical medicine
RC955-962
Public aspects of medicine
RA1-1270
description Dengue virus (DENV) is a human pathogen and its etiology has been widely established. There are many interactions between DENV and human proteins that have been reported in literature. However, no publicly accessible resource for efficiently retrieving the information is yet available. In this study, we mined all publicly available dengue-human interactions that have been reported in the literature into a database called DenHunt. We retrieved 682 direct interactions of human proteins with dengue viral components, 382 indirect interactions and 4120 differentially expressed human genes in dengue infected cell lines and patients. We have illustrated the importance of DenHunt by mapping the dengue-human interactions on to the host interactome and observed that the virus targets multiple host functional complexes of important cellular processes such as metabolism, immune system and signaling pathways suggesting a potential role of these interactions in viral pathogenesis. We also observed that 7 percent of the dengue virus interacting human proteins are also associated with other infectious and non-infectious diseases. Finally, the understanding that comes from such analyses could be used to design better strategies to counteract the diseases caused by dengue virus. The whole dataset has been catalogued in a searchable database, called DenHunt (http://proline.biochem.iisc.ernet.in/DenHunt/).
format Article in Journal/Newspaper
author Prashanthi Karyala
Rahul Metri
Christopher Bathula
Syam K Yelamanchi
Lipika Sahoo
Selvam Arjunan
Narayan P Sastri
Nagasuma Chandra
author_facet Prashanthi Karyala
Rahul Metri
Christopher Bathula
Syam K Yelamanchi
Lipika Sahoo
Selvam Arjunan
Narayan P Sastri
Nagasuma Chandra
author_sort Prashanthi Karyala
title DenHunt - A Comprehensive Database of the Intricate Network of Dengue-Human Interactions.
title_short DenHunt - A Comprehensive Database of the Intricate Network of Dengue-Human Interactions.
title_full DenHunt - A Comprehensive Database of the Intricate Network of Dengue-Human Interactions.
title_fullStr DenHunt - A Comprehensive Database of the Intricate Network of Dengue-Human Interactions.
title_full_unstemmed DenHunt - A Comprehensive Database of the Intricate Network of Dengue-Human Interactions.
title_sort denhunt - a comprehensive database of the intricate network of dengue-human interactions.
publisher Public Library of Science (PLoS)
publishDate 2016
url https://doi.org/10.1371/journal.pntd.0004965
https://doaj.org/article/785a2b1ad3424b91916cd61c83bfb53c
geographic Arctic
geographic_facet Arctic
genre Arctic
genre_facet Arctic
op_source PLoS Neglected Tropical Diseases, Vol 10, Iss 9, p e0004965 (2016)
op_relation http://europepmc.org/articles/PMC5019383?pdf=render
https://doaj.org/toc/1935-2727
https://doaj.org/toc/1935-2735
1935-2727
1935-2735
doi:10.1371/journal.pntd.0004965
https://doaj.org/article/785a2b1ad3424b91916cd61c83bfb53c
op_doi https://doi.org/10.1371/journal.pntd.0004965
container_title PLOS Neglected Tropical Diseases
container_volume 10
container_issue 9
container_start_page e0004965
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