Separate origins of ice-binding proteins in antarctic chlamydomonas species.
The green alga Chlamydomonas raudensis is an important primary producer in a number of ice-covered lakes and ponds in Antarctica. A C. raudensis isolate (UWO241) from Lake Bonney in the McMurdo Dry Valleys, like many other Antarctic algae, was found to secrete ice-binding proteins (IBPs), which appe...
Published in: | PLoS ONE |
---|---|
Main Authors: | , |
Format: | Article in Journal/Newspaper |
Language: | English |
Published: |
Public Library of Science (PLoS)
2013
|
Subjects: | |
Online Access: | https://doi.org/10.1371/journal.pone.0059186 https://doaj.org/article/725f57303b4d496682e87bb5d142beaf |
id |
ftdoajarticles:oai:doaj.org/article:725f57303b4d496682e87bb5d142beaf |
---|---|
record_format |
openpolar |
spelling |
ftdoajarticles:oai:doaj.org/article:725f57303b4d496682e87bb5d142beaf 2023-05-15T13:36:56+02:00 Separate origins of ice-binding proteins in antarctic chlamydomonas species. James A Raymond Rachael Morgan-Kiss 2013-01-01T00:00:00Z https://doi.org/10.1371/journal.pone.0059186 https://doaj.org/article/725f57303b4d496682e87bb5d142beaf EN eng Public Library of Science (PLoS) http://europepmc.org/articles/PMC3594216?pdf=render https://doaj.org/toc/1932-6203 1932-6203 doi:10.1371/journal.pone.0059186 https://doaj.org/article/725f57303b4d496682e87bb5d142beaf PLoS ONE, Vol 8, Iss 3, p e59186 (2013) Medicine R Science Q article 2013 ftdoajarticles https://doi.org/10.1371/journal.pone.0059186 2022-12-31T10:40:24Z The green alga Chlamydomonas raudensis is an important primary producer in a number of ice-covered lakes and ponds in Antarctica. A C. raudensis isolate (UWO241) from Lake Bonney in the McMurdo Dry Valleys, like many other Antarctic algae, was found to secrete ice-binding proteins (IBPs), which appear to be essential for survival in icy environments. The IBPs of several Antarctic algae (diatoms, a prymesiophyte, and a prasinophyte) are similar to each other (here designated as type I IBPs) and have been proposed to have bacterial origins. Other IBPs (type II IBPs) that bear no resemblance to type I IBPs, have been found in the Antarctic Chlamydomonas sp. CCMP681, a putative snow alga, raising the possibility that chlamydomonad IBPs developed separately from the IBPs of other algae. To test this idea, we obtained the IBP sequences of C. raudensis UWO241 by sequencing the transcriptome. A large number of transcripts revealed no sequences resembling type II IBPs. Instead, many isoforms resembling type I IBPs were found, and these most closely matched a hypothetical protein from the bacterium Stigmatella aurantiaca. The sequences were confirmed to encode IBPs by the activity of a recombinant protein and by the matching of predicted and observed isoelectric points and molecular weights. Furthermore, a mesophilic sister species, C. raudensis SAG49.72, showed no ice-binding activity or PCR products from UWO241 IBP primers. These results confirm that algal IBPs are required for survival in icy habitats and demonstrate that they have diverse origins that are unrelated to the taxonomic positions of the algae. Last, we show that the C. raudensis UWO241 IBPs can change the structure of ice in a way that could increase the survivability of cells trapped in the ice. Article in Journal/Newspaper Antarc* Antarctic Antarctica McMurdo Dry Valleys Directory of Open Access Journals: DOAJ Articles Antarctic The Antarctic McMurdo Dry Valleys Bonney ENVELOPE(162.417,162.417,-77.717,-77.717) Lake Bonney ENVELOPE(-25.588,-25.588,-80.361,-80.361) PLoS ONE 8 3 e59186 |
institution |
Open Polar |
collection |
Directory of Open Access Journals: DOAJ Articles |
op_collection_id |
ftdoajarticles |
language |
English |
topic |
Medicine R Science Q |
spellingShingle |
Medicine R Science Q James A Raymond Rachael Morgan-Kiss Separate origins of ice-binding proteins in antarctic chlamydomonas species. |
topic_facet |
Medicine R Science Q |
description |
The green alga Chlamydomonas raudensis is an important primary producer in a number of ice-covered lakes and ponds in Antarctica. A C. raudensis isolate (UWO241) from Lake Bonney in the McMurdo Dry Valleys, like many other Antarctic algae, was found to secrete ice-binding proteins (IBPs), which appear to be essential for survival in icy environments. The IBPs of several Antarctic algae (diatoms, a prymesiophyte, and a prasinophyte) are similar to each other (here designated as type I IBPs) and have been proposed to have bacterial origins. Other IBPs (type II IBPs) that bear no resemblance to type I IBPs, have been found in the Antarctic Chlamydomonas sp. CCMP681, a putative snow alga, raising the possibility that chlamydomonad IBPs developed separately from the IBPs of other algae. To test this idea, we obtained the IBP sequences of C. raudensis UWO241 by sequencing the transcriptome. A large number of transcripts revealed no sequences resembling type II IBPs. Instead, many isoforms resembling type I IBPs were found, and these most closely matched a hypothetical protein from the bacterium Stigmatella aurantiaca. The sequences were confirmed to encode IBPs by the activity of a recombinant protein and by the matching of predicted and observed isoelectric points and molecular weights. Furthermore, a mesophilic sister species, C. raudensis SAG49.72, showed no ice-binding activity or PCR products from UWO241 IBP primers. These results confirm that algal IBPs are required for survival in icy habitats and demonstrate that they have diverse origins that are unrelated to the taxonomic positions of the algae. Last, we show that the C. raudensis UWO241 IBPs can change the structure of ice in a way that could increase the survivability of cells trapped in the ice. |
format |
Article in Journal/Newspaper |
author |
James A Raymond Rachael Morgan-Kiss |
author_facet |
James A Raymond Rachael Morgan-Kiss |
author_sort |
James A Raymond |
title |
Separate origins of ice-binding proteins in antarctic chlamydomonas species. |
title_short |
Separate origins of ice-binding proteins in antarctic chlamydomonas species. |
title_full |
Separate origins of ice-binding proteins in antarctic chlamydomonas species. |
title_fullStr |
Separate origins of ice-binding proteins in antarctic chlamydomonas species. |
title_full_unstemmed |
Separate origins of ice-binding proteins in antarctic chlamydomonas species. |
title_sort |
separate origins of ice-binding proteins in antarctic chlamydomonas species. |
publisher |
Public Library of Science (PLoS) |
publishDate |
2013 |
url |
https://doi.org/10.1371/journal.pone.0059186 https://doaj.org/article/725f57303b4d496682e87bb5d142beaf |
long_lat |
ENVELOPE(162.417,162.417,-77.717,-77.717) ENVELOPE(-25.588,-25.588,-80.361,-80.361) |
geographic |
Antarctic The Antarctic McMurdo Dry Valleys Bonney Lake Bonney |
geographic_facet |
Antarctic The Antarctic McMurdo Dry Valleys Bonney Lake Bonney |
genre |
Antarc* Antarctic Antarctica McMurdo Dry Valleys |
genre_facet |
Antarc* Antarctic Antarctica McMurdo Dry Valleys |
op_source |
PLoS ONE, Vol 8, Iss 3, p e59186 (2013) |
op_relation |
http://europepmc.org/articles/PMC3594216?pdf=render https://doaj.org/toc/1932-6203 1932-6203 doi:10.1371/journal.pone.0059186 https://doaj.org/article/725f57303b4d496682e87bb5d142beaf |
op_doi |
https://doi.org/10.1371/journal.pone.0059186 |
container_title |
PLoS ONE |
container_volume |
8 |
container_issue |
3 |
container_start_page |
e59186 |
_version_ |
1766085727037161472 |