Dated phylogenies of the sister genera Macaranga and Mallotus (Euphorbiaceae): congruence in historical biogeographic patterns?

Molecular phylogenies and estimates of divergence times within the sister genera Macaranga and Mallotus were estimated using Bayesian relaxed clock analyses of two generic data sets, one per genus. Both data sets were based on different molecular markers and largely different samples. Per genus thre...

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Published in:PLoS ONE
Main Authors: Peter C van Welzen, Joeri S Strijk, Johanna H A van Konijnenburg-van Cittert, Monica Nucete, Vincent S F T Merckx
Format: Article in Journal/Newspaper
Language:English
Published: Public Library of Science (PLoS) 2014
Subjects:
R
Q
Online Access:https://doi.org/10.1371/journal.pone.0085713
https://doaj.org/article/714916a6f363427caa224ae70f387001
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spelling ftdoajarticles:oai:doaj.org/article:714916a6f363427caa224ae70f387001 2023-05-15T18:50:54+02:00 Dated phylogenies of the sister genera Macaranga and Mallotus (Euphorbiaceae): congruence in historical biogeographic patterns? Peter C van Welzen Joeri S Strijk Johanna H A van Konijnenburg-van Cittert Monica Nucete Vincent S F T Merckx 2014-01-01T00:00:00Z https://doi.org/10.1371/journal.pone.0085713 https://doaj.org/article/714916a6f363427caa224ae70f387001 EN eng Public Library of Science (PLoS) https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/24465660/pdf/?tool=EBI https://doaj.org/toc/1932-6203 1932-6203 doi:10.1371/journal.pone.0085713 https://doaj.org/article/714916a6f363427caa224ae70f387001 PLoS ONE, Vol 9, Iss 1, p e85713 (2014) Medicine R Science Q article 2014 ftdoajarticles https://doi.org/10.1371/journal.pone.0085713 2022-12-31T04:54:27Z Molecular phylogenies and estimates of divergence times within the sister genera Macaranga and Mallotus were estimated using Bayesian relaxed clock analyses of two generic data sets, one per genus. Both data sets were based on different molecular markers and largely different samples. Per genus three calibration points were utilised. The basal calibration point (crown node of all taxa used) was taken from literature and used for both taxa. The other three calibrations were based on fossils of which two were used per genus. We compared patterns of dispersal and diversification in Macaranga and Mallotus using ancestral area reconstruction in RASP (S-DIVA option) and contrasted our results with biogeographical and geological records to assess accuracy of inferred age estimates. A check of the fossil calibration point showed that the Japanese fossil, used for dating the divergence of Mallotus, probably had to be attached to a lower node, the stem node of all pioneer species, but even then the divergence time was still younger than the estimated age of the fossil. The African (only used in the Macaranga data set) and New Zealand fossils (used for both genera) seemed reliably placed. Our results are in line with existing geological data and the presence of stepping stones that provided dispersal pathways from Borneo to New Guinea-Australia, from Borneo to mainland Asia and additionally at least once to Africa and Madagascar via land and back to India via Indian Ocean island chains. The two genera show congruence in dispersal patterns, which corroborate divergence time estimates, although the overall mode and tempo of dispersal and diversification differ significantly as shown by distribution patterns of extant species. Article in Journal/Newspaper Ocean Island Stepping Stones Directory of Open Access Journals: DOAJ Articles Indian New Zealand Stepping Stones ENVELOPE(-63.992,-63.992,-64.786,-64.786) PLoS ONE 9 1 e85713
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Medicine
R
Science
Q
spellingShingle Medicine
R
Science
Q
Peter C van Welzen
Joeri S Strijk
Johanna H A van Konijnenburg-van Cittert
Monica Nucete
Vincent S F T Merckx
Dated phylogenies of the sister genera Macaranga and Mallotus (Euphorbiaceae): congruence in historical biogeographic patterns?
topic_facet Medicine
R
Science
Q
description Molecular phylogenies and estimates of divergence times within the sister genera Macaranga and Mallotus were estimated using Bayesian relaxed clock analyses of two generic data sets, one per genus. Both data sets were based on different molecular markers and largely different samples. Per genus three calibration points were utilised. The basal calibration point (crown node of all taxa used) was taken from literature and used for both taxa. The other three calibrations were based on fossils of which two were used per genus. We compared patterns of dispersal and diversification in Macaranga and Mallotus using ancestral area reconstruction in RASP (S-DIVA option) and contrasted our results with biogeographical and geological records to assess accuracy of inferred age estimates. A check of the fossil calibration point showed that the Japanese fossil, used for dating the divergence of Mallotus, probably had to be attached to a lower node, the stem node of all pioneer species, but even then the divergence time was still younger than the estimated age of the fossil. The African (only used in the Macaranga data set) and New Zealand fossils (used for both genera) seemed reliably placed. Our results are in line with existing geological data and the presence of stepping stones that provided dispersal pathways from Borneo to New Guinea-Australia, from Borneo to mainland Asia and additionally at least once to Africa and Madagascar via land and back to India via Indian Ocean island chains. The two genera show congruence in dispersal patterns, which corroborate divergence time estimates, although the overall mode and tempo of dispersal and diversification differ significantly as shown by distribution patterns of extant species.
format Article in Journal/Newspaper
author Peter C van Welzen
Joeri S Strijk
Johanna H A van Konijnenburg-van Cittert
Monica Nucete
Vincent S F T Merckx
author_facet Peter C van Welzen
Joeri S Strijk
Johanna H A van Konijnenburg-van Cittert
Monica Nucete
Vincent S F T Merckx
author_sort Peter C van Welzen
title Dated phylogenies of the sister genera Macaranga and Mallotus (Euphorbiaceae): congruence in historical biogeographic patterns?
title_short Dated phylogenies of the sister genera Macaranga and Mallotus (Euphorbiaceae): congruence in historical biogeographic patterns?
title_full Dated phylogenies of the sister genera Macaranga and Mallotus (Euphorbiaceae): congruence in historical biogeographic patterns?
title_fullStr Dated phylogenies of the sister genera Macaranga and Mallotus (Euphorbiaceae): congruence in historical biogeographic patterns?
title_full_unstemmed Dated phylogenies of the sister genera Macaranga and Mallotus (Euphorbiaceae): congruence in historical biogeographic patterns?
title_sort dated phylogenies of the sister genera macaranga and mallotus (euphorbiaceae): congruence in historical biogeographic patterns?
publisher Public Library of Science (PLoS)
publishDate 2014
url https://doi.org/10.1371/journal.pone.0085713
https://doaj.org/article/714916a6f363427caa224ae70f387001
long_lat ENVELOPE(-63.992,-63.992,-64.786,-64.786)
geographic Indian
New Zealand
Stepping Stones
geographic_facet Indian
New Zealand
Stepping Stones
genre Ocean Island
Stepping Stones
genre_facet Ocean Island
Stepping Stones
op_source PLoS ONE, Vol 9, Iss 1, p e85713 (2014)
op_relation https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/24465660/pdf/?tool=EBI
https://doaj.org/toc/1932-6203
1932-6203
doi:10.1371/journal.pone.0085713
https://doaj.org/article/714916a6f363427caa224ae70f387001
op_doi https://doi.org/10.1371/journal.pone.0085713
container_title PLoS ONE
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