Genetic variation in histidine rich proteins among Indian Plasmodium falciparum population: possible cause of variable sensitivity of malaria rapid diagnostic tests
Abstract Background Rapid diagnostic tests (RDTs) have revolutionized the diagnosis of malaria. Among the various factors affecting RDTs sensitivity is genetic variation of the antigen used. The genetic variation in PfHRP2 and PfHRP3 proteins was studied among the Indian Plasmodium falciparum isolat...
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ftdoajarticles:oai:doaj.org/article:6d6479fd5f9648a49c95e2b8cca09ecc 2023-05-15T15:06:37+02:00 Genetic variation in histidine rich proteins among Indian Plasmodium falciparum population: possible cause of variable sensitivity of malaria rapid diagnostic tests Kumar Navin Singh Jai PN Pande Veena Mishra Neelima Srivastava Bina Kapoor Ridhima Valecha Neena Anvikar Anupkumar R 2012-08-01T00:00:00Z https://doi.org/10.1186/1475-2875-11-298 https://doaj.org/article/6d6479fd5f9648a49c95e2b8cca09ecc EN eng BMC http://www.malariajournal.com/content/11/1/298 https://doaj.org/toc/1475-2875 doi:10.1186/1475-2875-11-298 1475-2875 https://doaj.org/article/6d6479fd5f9648a49c95e2b8cca09ecc Malaria Journal, Vol 11, Iss 1, p 298 (2012) Plasmodium falciparum Histidine rich protein 2 Plasmodium falciparum Histidine rich protein 3 Rapid Diagnostic Tests Genetic polymorphism India Arctic medicine. Tropical medicine RC955-962 Infectious and parasitic diseases RC109-216 article 2012 ftdoajarticles https://doi.org/10.1186/1475-2875-11-298 2022-12-31T13:44:55Z Abstract Background Rapid diagnostic tests (RDTs) have revolutionized the diagnosis of malaria. Among the various factors affecting RDTs sensitivity is genetic variation of the antigen used. The genetic variation in PfHRP2 and PfHRP3 proteins was studied among the Indian Plasmodium falciparum isolates. Methods One hundred and forty isolates of P. falciparum were collected from six geographical regions of India. Target genes encoding PfHRP2 and PfHRP3 antigens were sequenced to study genetic polymorphism. Minimum detection limit giving a positive rapid diagnostic test was also determined. Results Extensive variations were observed in amino acid repeat types of PfHRP2 and PfHRP3. PfHRP2 exhibited more polymorphism than PfHRP3. Significant relation was observed between type 2 and type 7 repeats and RDT detection rate as higher number of these repeats showed better sensitivity with RDTs. Conclusion The results provide insights into the genetic diversity of Pfhrp2 and Pfhrp3 genes among Indian P. falciparum population and its relation to RDT sensitivity. Article in Journal/Newspaper Arctic Directory of Open Access Journals: DOAJ Articles Arctic Indian Malaria Journal 11 1 298 |
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Directory of Open Access Journals: DOAJ Articles |
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English |
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Plasmodium falciparum Histidine rich protein 2 Plasmodium falciparum Histidine rich protein 3 Rapid Diagnostic Tests Genetic polymorphism India Arctic medicine. Tropical medicine RC955-962 Infectious and parasitic diseases RC109-216 |
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Plasmodium falciparum Histidine rich protein 2 Plasmodium falciparum Histidine rich protein 3 Rapid Diagnostic Tests Genetic polymorphism India Arctic medicine. Tropical medicine RC955-962 Infectious and parasitic diseases RC109-216 Kumar Navin Singh Jai PN Pande Veena Mishra Neelima Srivastava Bina Kapoor Ridhima Valecha Neena Anvikar Anupkumar R Genetic variation in histidine rich proteins among Indian Plasmodium falciparum population: possible cause of variable sensitivity of malaria rapid diagnostic tests |
topic_facet |
Plasmodium falciparum Histidine rich protein 2 Plasmodium falciparum Histidine rich protein 3 Rapid Diagnostic Tests Genetic polymorphism India Arctic medicine. Tropical medicine RC955-962 Infectious and parasitic diseases RC109-216 |
description |
Abstract Background Rapid diagnostic tests (RDTs) have revolutionized the diagnosis of malaria. Among the various factors affecting RDTs sensitivity is genetic variation of the antigen used. The genetic variation in PfHRP2 and PfHRP3 proteins was studied among the Indian Plasmodium falciparum isolates. Methods One hundred and forty isolates of P. falciparum were collected from six geographical regions of India. Target genes encoding PfHRP2 and PfHRP3 antigens were sequenced to study genetic polymorphism. Minimum detection limit giving a positive rapid diagnostic test was also determined. Results Extensive variations were observed in amino acid repeat types of PfHRP2 and PfHRP3. PfHRP2 exhibited more polymorphism than PfHRP3. Significant relation was observed between type 2 and type 7 repeats and RDT detection rate as higher number of these repeats showed better sensitivity with RDTs. Conclusion The results provide insights into the genetic diversity of Pfhrp2 and Pfhrp3 genes among Indian P. falciparum population and its relation to RDT sensitivity. |
format |
Article in Journal/Newspaper |
author |
Kumar Navin Singh Jai PN Pande Veena Mishra Neelima Srivastava Bina Kapoor Ridhima Valecha Neena Anvikar Anupkumar R |
author_facet |
Kumar Navin Singh Jai PN Pande Veena Mishra Neelima Srivastava Bina Kapoor Ridhima Valecha Neena Anvikar Anupkumar R |
author_sort |
Kumar Navin |
title |
Genetic variation in histidine rich proteins among Indian Plasmodium falciparum population: possible cause of variable sensitivity of malaria rapid diagnostic tests |
title_short |
Genetic variation in histidine rich proteins among Indian Plasmodium falciparum population: possible cause of variable sensitivity of malaria rapid diagnostic tests |
title_full |
Genetic variation in histidine rich proteins among Indian Plasmodium falciparum population: possible cause of variable sensitivity of malaria rapid diagnostic tests |
title_fullStr |
Genetic variation in histidine rich proteins among Indian Plasmodium falciparum population: possible cause of variable sensitivity of malaria rapid diagnostic tests |
title_full_unstemmed |
Genetic variation in histidine rich proteins among Indian Plasmodium falciparum population: possible cause of variable sensitivity of malaria rapid diagnostic tests |
title_sort |
genetic variation in histidine rich proteins among indian plasmodium falciparum population: possible cause of variable sensitivity of malaria rapid diagnostic tests |
publisher |
BMC |
publishDate |
2012 |
url |
https://doi.org/10.1186/1475-2875-11-298 https://doaj.org/article/6d6479fd5f9648a49c95e2b8cca09ecc |
geographic |
Arctic Indian |
geographic_facet |
Arctic Indian |
genre |
Arctic |
genre_facet |
Arctic |
op_source |
Malaria Journal, Vol 11, Iss 1, p 298 (2012) |
op_relation |
http://www.malariajournal.com/content/11/1/298 https://doaj.org/toc/1475-2875 doi:10.1186/1475-2875-11-298 1475-2875 https://doaj.org/article/6d6479fd5f9648a49c95e2b8cca09ecc |
op_doi |
https://doi.org/10.1186/1475-2875-11-298 |
container_title |
Malaria Journal |
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11 |
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1 |
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298 |
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1766338193597136896 |