Microbial Eukaryotes in an Arctic Under-Ice Spring Bloom North of Svalbard

Microbial eukaryotes can play prominent roles in the Arctic marine ecosystem, but their diversity and variability is not well known in the ice-covered ecosystems. We determined the community composition of microbial eukaryotes in an Arctic under-ice spring bloom north of Svalbard using metabarcoding...

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Published in:Frontiers in Microbiology
Main Authors: Archana R. Meshram, Anna Vader, Svein Kristiansen, Tove M. Gabrielsen
Format: Article in Journal/Newspaper
Language:English
Published: Frontiers Media S.A. 2017
Subjects:
Online Access:https://doi.org/10.3389/fmicb.2017.01099
https://doaj.org/article/67d0f7fa135a4ef78c558c975e00f142
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spelling ftdoajarticles:oai:doaj.org/article:67d0f7fa135a4ef78c558c975e00f142 2023-05-15T14:46:34+02:00 Microbial Eukaryotes in an Arctic Under-Ice Spring Bloom North of Svalbard Archana R. Meshram Anna Vader Svein Kristiansen Tove M. Gabrielsen 2017-06-01T00:00:00Z https://doi.org/10.3389/fmicb.2017.01099 https://doaj.org/article/67d0f7fa135a4ef78c558c975e00f142 EN eng Frontiers Media S.A. http://journal.frontiersin.org/article/10.3389/fmicb.2017.01099/full https://doaj.org/toc/1664-302X 1664-302X doi:10.3389/fmicb.2017.01099 https://doaj.org/article/67d0f7fa135a4ef78c558c975e00f142 Frontiers in Microbiology, Vol 8 (2017) Arctic under-ice spring bloom microbial eukaryotes 18S V4 region pyrosequencing Microbiology QR1-502 article 2017 ftdoajarticles https://doi.org/10.3389/fmicb.2017.01099 2022-12-31T03:12:44Z Microbial eukaryotes can play prominent roles in the Arctic marine ecosystem, but their diversity and variability is not well known in the ice-covered ecosystems. We determined the community composition of microbial eukaryotes in an Arctic under-ice spring bloom north of Svalbard using metabarcoding of DNA and RNA from the hypervariable V4 region of 18S nrDNA. At the two stations studied, the photosynthetic biomass was dominated by protists >3 μm and was concentrated in the upper 70–80 m, above the thermocline and halocline. Hierarchical cluster analyses as well as ordination analyses showed a distinct clustering of the microbial eukaryote communities according to a combination of water mass and local environmental characteristics. While samples collected in the surface mixed layer differed distinctly between the two sites, the deeper communities collected in Atlantic Water were fairly similar despite being geographically distant. The differentiation of the microbial eukaryote communities of the upper mixed water was probably driven by local development and advection, while the lack of such differentiation in the communities of Atlantic Water reflects the homogenizing effect of water currents on microbial communities. Article in Journal/Newspaper Arctic Svalbard Directory of Open Access Journals: DOAJ Articles Arctic Svalbard Frontiers in Microbiology 8
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Arctic
under-ice spring bloom
microbial eukaryotes
18S V4 region
pyrosequencing
Microbiology
QR1-502
spellingShingle Arctic
under-ice spring bloom
microbial eukaryotes
18S V4 region
pyrosequencing
Microbiology
QR1-502
Archana R. Meshram
Anna Vader
Svein Kristiansen
Tove M. Gabrielsen
Microbial Eukaryotes in an Arctic Under-Ice Spring Bloom North of Svalbard
topic_facet Arctic
under-ice spring bloom
microbial eukaryotes
18S V4 region
pyrosequencing
Microbiology
QR1-502
description Microbial eukaryotes can play prominent roles in the Arctic marine ecosystem, but their diversity and variability is not well known in the ice-covered ecosystems. We determined the community composition of microbial eukaryotes in an Arctic under-ice spring bloom north of Svalbard using metabarcoding of DNA and RNA from the hypervariable V4 region of 18S nrDNA. At the two stations studied, the photosynthetic biomass was dominated by protists >3 μm and was concentrated in the upper 70–80 m, above the thermocline and halocline. Hierarchical cluster analyses as well as ordination analyses showed a distinct clustering of the microbial eukaryote communities according to a combination of water mass and local environmental characteristics. While samples collected in the surface mixed layer differed distinctly between the two sites, the deeper communities collected in Atlantic Water were fairly similar despite being geographically distant. The differentiation of the microbial eukaryote communities of the upper mixed water was probably driven by local development and advection, while the lack of such differentiation in the communities of Atlantic Water reflects the homogenizing effect of water currents on microbial communities.
format Article in Journal/Newspaper
author Archana R. Meshram
Anna Vader
Svein Kristiansen
Tove M. Gabrielsen
author_facet Archana R. Meshram
Anna Vader
Svein Kristiansen
Tove M. Gabrielsen
author_sort Archana R. Meshram
title Microbial Eukaryotes in an Arctic Under-Ice Spring Bloom North of Svalbard
title_short Microbial Eukaryotes in an Arctic Under-Ice Spring Bloom North of Svalbard
title_full Microbial Eukaryotes in an Arctic Under-Ice Spring Bloom North of Svalbard
title_fullStr Microbial Eukaryotes in an Arctic Under-Ice Spring Bloom North of Svalbard
title_full_unstemmed Microbial Eukaryotes in an Arctic Under-Ice Spring Bloom North of Svalbard
title_sort microbial eukaryotes in an arctic under-ice spring bloom north of svalbard
publisher Frontiers Media S.A.
publishDate 2017
url https://doi.org/10.3389/fmicb.2017.01099
https://doaj.org/article/67d0f7fa135a4ef78c558c975e00f142
geographic Arctic
Svalbard
geographic_facet Arctic
Svalbard
genre Arctic
Svalbard
genre_facet Arctic
Svalbard
op_source Frontiers in Microbiology, Vol 8 (2017)
op_relation http://journal.frontiersin.org/article/10.3389/fmicb.2017.01099/full
https://doaj.org/toc/1664-302X
1664-302X
doi:10.3389/fmicb.2017.01099
https://doaj.org/article/67d0f7fa135a4ef78c558c975e00f142
op_doi https://doi.org/10.3389/fmicb.2017.01099
container_title Frontiers in Microbiology
container_volume 8
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