Flower Detection Using Object Analysis: New Ways to Quantify Plant Phenology in a Warming Tundra Biome

Rising temperatures caused by global warming are affecting the distributions of many plant and animal species across the world. This can lead to structural changes in entire ecosystems, and serious, persistent environmental consequences. However, many of these changes occur in vast and poorly access...

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Published in:IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing
Main Authors: Karol Stanski, Isla H. Myers-Smith, Christopher G. Lucas
Format: Article in Journal/Newspaper
Language:English
Published: IEEE 2021
Subjects:
Online Access:https://doi.org/10.1109/JSTARS.2021.3110365
https://doaj.org/article/6652703eb20c462ab163071acefa992d
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spelling ftdoajarticles:oai:doaj.org/article:6652703eb20c462ab163071acefa992d 2023-05-15T15:09:14+02:00 Flower Detection Using Object Analysis: New Ways to Quantify Plant Phenology in a Warming Tundra Biome Karol Stanski Isla H. Myers-Smith Christopher G. Lucas 2021-01-01T00:00:00Z https://doi.org/10.1109/JSTARS.2021.3110365 https://doaj.org/article/6652703eb20c462ab163071acefa992d EN eng IEEE https://ieeexplore.ieee.org/document/9531417/ https://doaj.org/toc/2151-1535 2151-1535 doi:10.1109/JSTARS.2021.3110365 https://doaj.org/article/6652703eb20c462ab163071acefa992d IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing, Vol 14, Pp 9287-9296 (2021) Object recognition remote sensing Ocean engineering TC1501-1800 Geophysics. Cosmic physics QC801-809 article 2021 ftdoajarticles https://doi.org/10.1109/JSTARS.2021.3110365 2022-12-30T21:01:50Z Rising temperatures caused by global warming are affecting the distributions of many plant and animal species across the world. This can lead to structural changes in entire ecosystems, and serious, persistent environmental consequences. However, many of these changes occur in vast and poorly accessible biomes and involve myriad species. As a consequence, conventional methods of measurement and data analysis are resource-intensive, restricted in scope, and in some cases, intractable for measuring species changes in remote areas. In this article, we introduce a method for detecting flowers of tundra plant species in large data sets obtained by aerial drones, making it possible to understand ecological change at scale, in remote areas. We focus on the sedge species E. vaginatum that is dominant at the investigated tundra field site in the Canadian Arctic. Our system is a modified version of the Faster R-CNN architecture capable of real-world plant phenology analysis. Our model outperforms experienced human annotators in both detection and counting, recording much higher recall and comparable level of precision, regardless of the image quality caused by varying weather conditions during the data collection. (K. Stanski, GitHub - karoleks4/flower-detection: Flower detection using object analysis: New ways to quantify plant phenology in a warming tundra biome. GitHub. Accessed: Sep. 17, 2021. [Online]. Available: https://github.com/karoleks4/flower-detection .) Article in Journal/Newspaper Arctic Global warming Tundra Directory of Open Access Journals: DOAJ Articles Arctic IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing 14 9287 9296
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Object recognition
remote sensing
Ocean engineering
TC1501-1800
Geophysics. Cosmic physics
QC801-809
spellingShingle Object recognition
remote sensing
Ocean engineering
TC1501-1800
Geophysics. Cosmic physics
QC801-809
Karol Stanski
Isla H. Myers-Smith
Christopher G. Lucas
Flower Detection Using Object Analysis: New Ways to Quantify Plant Phenology in a Warming Tundra Biome
topic_facet Object recognition
remote sensing
Ocean engineering
TC1501-1800
Geophysics. Cosmic physics
QC801-809
description Rising temperatures caused by global warming are affecting the distributions of many plant and animal species across the world. This can lead to structural changes in entire ecosystems, and serious, persistent environmental consequences. However, many of these changes occur in vast and poorly accessible biomes and involve myriad species. As a consequence, conventional methods of measurement and data analysis are resource-intensive, restricted in scope, and in some cases, intractable for measuring species changes in remote areas. In this article, we introduce a method for detecting flowers of tundra plant species in large data sets obtained by aerial drones, making it possible to understand ecological change at scale, in remote areas. We focus on the sedge species E. vaginatum that is dominant at the investigated tundra field site in the Canadian Arctic. Our system is a modified version of the Faster R-CNN architecture capable of real-world plant phenology analysis. Our model outperforms experienced human annotators in both detection and counting, recording much higher recall and comparable level of precision, regardless of the image quality caused by varying weather conditions during the data collection. (K. Stanski, GitHub - karoleks4/flower-detection: Flower detection using object analysis: New ways to quantify plant phenology in a warming tundra biome. GitHub. Accessed: Sep. 17, 2021. [Online]. Available: https://github.com/karoleks4/flower-detection .)
format Article in Journal/Newspaper
author Karol Stanski
Isla H. Myers-Smith
Christopher G. Lucas
author_facet Karol Stanski
Isla H. Myers-Smith
Christopher G. Lucas
author_sort Karol Stanski
title Flower Detection Using Object Analysis: New Ways to Quantify Plant Phenology in a Warming Tundra Biome
title_short Flower Detection Using Object Analysis: New Ways to Quantify Plant Phenology in a Warming Tundra Biome
title_full Flower Detection Using Object Analysis: New Ways to Quantify Plant Phenology in a Warming Tundra Biome
title_fullStr Flower Detection Using Object Analysis: New Ways to Quantify Plant Phenology in a Warming Tundra Biome
title_full_unstemmed Flower Detection Using Object Analysis: New Ways to Quantify Plant Phenology in a Warming Tundra Biome
title_sort flower detection using object analysis: new ways to quantify plant phenology in a warming tundra biome
publisher IEEE
publishDate 2021
url https://doi.org/10.1109/JSTARS.2021.3110365
https://doaj.org/article/6652703eb20c462ab163071acefa992d
geographic Arctic
geographic_facet Arctic
genre Arctic
Global warming
Tundra
genre_facet Arctic
Global warming
Tundra
op_source IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing, Vol 14, Pp 9287-9296 (2021)
op_relation https://ieeexplore.ieee.org/document/9531417/
https://doaj.org/toc/2151-1535
2151-1535
doi:10.1109/JSTARS.2021.3110365
https://doaj.org/article/6652703eb20c462ab163071acefa992d
op_doi https://doi.org/10.1109/JSTARS.2021.3110365
container_title IEEE Journal of Selected Topics in Applied Earth Observations and Remote Sensing
container_volume 14
container_start_page 9287
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