Fast and robust single PCR for Plasmodium sporozoite detection in mosquitoes using the cytochrome oxidase I gene

Abstract Background Molecular tools for detecting malaria-infected mosquitoes with improved practicality, sensitivity and specificity, and high-throughput are required. A common PCR technique used to detect mosquitoes infected with Plasmodium spp. is a nested PCR assay based on the 18s-rRNA gene. Ho...

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Published in:Malaria Journal
Main Authors: Diego F. Echeverry, Nicholas A. Deason, Victoria Makuru, Jenna Davidson, Honglin Xiao, Julie Niedbalski, Xiaoyu Yu, Jennifer C. Stevenson, Hugo Bugoro, Allan Aparaimo, Hedrick Reuben, Robert Cooper, Thomas R. Burkot, Tanya L. Russell, Frank H. Collins, Neil F. Lobo
Format: Article in Journal/Newspaper
Language:English
Published: BMC 2017
Subjects:
Online Access:https://doi.org/10.1186/s12936-017-1881-1
https://doaj.org/article/64d2d9009af647d8aa6c5431dacd6c02
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spelling ftdoajarticles:oai:doaj.org/article:64d2d9009af647d8aa6c5431dacd6c02 2023-05-15T15:16:32+02:00 Fast and robust single PCR for Plasmodium sporozoite detection in mosquitoes using the cytochrome oxidase I gene Diego F. Echeverry Nicholas A. Deason Victoria Makuru Jenna Davidson Honglin Xiao Julie Niedbalski Xiaoyu Yu Jennifer C. Stevenson Hugo Bugoro Allan Aparaimo Hedrick Reuben Robert Cooper Thomas R. Burkot Tanya L. Russell Frank H. Collins Neil F. Lobo 2017-05-01T00:00:00Z https://doi.org/10.1186/s12936-017-1881-1 https://doaj.org/article/64d2d9009af647d8aa6c5431dacd6c02 EN eng BMC http://link.springer.com/article/10.1186/s12936-017-1881-1 https://doaj.org/toc/1475-2875 doi:10.1186/s12936-017-1881-1 1475-2875 https://doaj.org/article/64d2d9009af647d8aa6c5431dacd6c02 Malaria Journal, Vol 16, Iss 1, Pp 1-8 (2017) Malaria Plasmodium Diagnosis Sporozoite Anopheles 18s-rRNA Arctic medicine. Tropical medicine RC955-962 Infectious and parasitic diseases RC109-216 article 2017 ftdoajarticles https://doi.org/10.1186/s12936-017-1881-1 2022-12-31T03:40:47Z Abstract Background Molecular tools for detecting malaria-infected mosquitoes with improved practicality, sensitivity and specificity, and high-throughput are required. A common PCR technique used to detect mosquitoes infected with Plasmodium spp. is a nested PCR assay based on the 18s-rRNA gene. However, this technique has several technical limitations, is laborious and time consuming. Methods In this study, a PCR-based on the Plasmodium cytochrome oxidase I (COX-I) gene was compared with the 18s-rRNA nested PCR using serial dilutions (330–0.0012 pg) of DNA from Plasmodium vivax, Plasmodium falciparum and Plasmodium knowlesi and with DNA from 48 positive and negative Kenyan mosquitoes (previously detected by using both ELISA and PCR). This assay for Plasmodium spp. DNA detection using the fast COX-I PCR assay was then performed individually on 2122 field collected mosquitoes (from the Solomon Islands) in which DNA was extracted from head and thorax. Results The fast COX-I PCR assay took 1 h to run and consistently detected as low as to 0.043 pg of parasite DNA (equivalent to two parasites) in a single PCR, while analyses with the 18s-rRNA nested PCR required 4 h to complete with a consistent detection threshold of 1.5 pg of DNA. Both assays produced concordant results when applied to the 48 Kenyan control samples with known Plasmodium spp. infection status. The fast COX-I PCR identified 23/2122 Plasmodium-infected mosquitoes from the Solomon Islands. Conclusions This new COX-I PCR adapted for a single PCR reaction is a faster, simpler, cheaper, more sensitive technique amenable to high-throughput analyses for Plasmodium DNA detection in mosquitoes and is comparable to the 18s-rRNA nested PCR. The improved sensitivity seen with the fast COX-I PCR will improve the accuracy of mosquito infection rate determination. Article in Journal/Newspaper Arctic Directory of Open Access Journals: DOAJ Articles Arctic Malaria Journal 16 1
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Malaria
Plasmodium
Diagnosis
Sporozoite
Anopheles
18s-rRNA
Arctic medicine. Tropical medicine
RC955-962
Infectious and parasitic diseases
RC109-216
spellingShingle Malaria
Plasmodium
Diagnosis
Sporozoite
Anopheles
18s-rRNA
Arctic medicine. Tropical medicine
RC955-962
Infectious and parasitic diseases
RC109-216
Diego F. Echeverry
Nicholas A. Deason
Victoria Makuru
Jenna Davidson
Honglin Xiao
Julie Niedbalski
Xiaoyu Yu
Jennifer C. Stevenson
Hugo Bugoro
Allan Aparaimo
Hedrick Reuben
Robert Cooper
Thomas R. Burkot
Tanya L. Russell
Frank H. Collins
Neil F. Lobo
Fast and robust single PCR for Plasmodium sporozoite detection in mosquitoes using the cytochrome oxidase I gene
topic_facet Malaria
Plasmodium
Diagnosis
Sporozoite
Anopheles
18s-rRNA
Arctic medicine. Tropical medicine
RC955-962
Infectious and parasitic diseases
RC109-216
description Abstract Background Molecular tools for detecting malaria-infected mosquitoes with improved practicality, sensitivity and specificity, and high-throughput are required. A common PCR technique used to detect mosquitoes infected with Plasmodium spp. is a nested PCR assay based on the 18s-rRNA gene. However, this technique has several technical limitations, is laborious and time consuming. Methods In this study, a PCR-based on the Plasmodium cytochrome oxidase I (COX-I) gene was compared with the 18s-rRNA nested PCR using serial dilutions (330–0.0012 pg) of DNA from Plasmodium vivax, Plasmodium falciparum and Plasmodium knowlesi and with DNA from 48 positive and negative Kenyan mosquitoes (previously detected by using both ELISA and PCR). This assay for Plasmodium spp. DNA detection using the fast COX-I PCR assay was then performed individually on 2122 field collected mosquitoes (from the Solomon Islands) in which DNA was extracted from head and thorax. Results The fast COX-I PCR assay took 1 h to run and consistently detected as low as to 0.043 pg of parasite DNA (equivalent to two parasites) in a single PCR, while analyses with the 18s-rRNA nested PCR required 4 h to complete with a consistent detection threshold of 1.5 pg of DNA. Both assays produced concordant results when applied to the 48 Kenyan control samples with known Plasmodium spp. infection status. The fast COX-I PCR identified 23/2122 Plasmodium-infected mosquitoes from the Solomon Islands. Conclusions This new COX-I PCR adapted for a single PCR reaction is a faster, simpler, cheaper, more sensitive technique amenable to high-throughput analyses for Plasmodium DNA detection in mosquitoes and is comparable to the 18s-rRNA nested PCR. The improved sensitivity seen with the fast COX-I PCR will improve the accuracy of mosquito infection rate determination.
format Article in Journal/Newspaper
author Diego F. Echeverry
Nicholas A. Deason
Victoria Makuru
Jenna Davidson
Honglin Xiao
Julie Niedbalski
Xiaoyu Yu
Jennifer C. Stevenson
Hugo Bugoro
Allan Aparaimo
Hedrick Reuben
Robert Cooper
Thomas R. Burkot
Tanya L. Russell
Frank H. Collins
Neil F. Lobo
author_facet Diego F. Echeverry
Nicholas A. Deason
Victoria Makuru
Jenna Davidson
Honglin Xiao
Julie Niedbalski
Xiaoyu Yu
Jennifer C. Stevenson
Hugo Bugoro
Allan Aparaimo
Hedrick Reuben
Robert Cooper
Thomas R. Burkot
Tanya L. Russell
Frank H. Collins
Neil F. Lobo
author_sort Diego F. Echeverry
title Fast and robust single PCR for Plasmodium sporozoite detection in mosquitoes using the cytochrome oxidase I gene
title_short Fast and robust single PCR for Plasmodium sporozoite detection in mosquitoes using the cytochrome oxidase I gene
title_full Fast and robust single PCR for Plasmodium sporozoite detection in mosquitoes using the cytochrome oxidase I gene
title_fullStr Fast and robust single PCR for Plasmodium sporozoite detection in mosquitoes using the cytochrome oxidase I gene
title_full_unstemmed Fast and robust single PCR for Plasmodium sporozoite detection in mosquitoes using the cytochrome oxidase I gene
title_sort fast and robust single pcr for plasmodium sporozoite detection in mosquitoes using the cytochrome oxidase i gene
publisher BMC
publishDate 2017
url https://doi.org/10.1186/s12936-017-1881-1
https://doaj.org/article/64d2d9009af647d8aa6c5431dacd6c02
geographic Arctic
geographic_facet Arctic
genre Arctic
genre_facet Arctic
op_source Malaria Journal, Vol 16, Iss 1, Pp 1-8 (2017)
op_relation http://link.springer.com/article/10.1186/s12936-017-1881-1
https://doaj.org/toc/1475-2875
doi:10.1186/s12936-017-1881-1
1475-2875
https://doaj.org/article/64d2d9009af647d8aa6c5431dacd6c02
op_doi https://doi.org/10.1186/s12936-017-1881-1
container_title Malaria Journal
container_volume 16
container_issue 1
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