Characterisation of a plancitoxin-1-like DNase II gene in Trichinella spiralis.
Deoxyribonuclease II (DNase II) is a well-known acidic endonuclease that catalyses the degradation of DNA into oligonucleotides. Only one or a few genes encoding DNase II have been observed in the genomes of many species. 125 DNase II-like protein family genes were predicted in the Trichinella spira...
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ftdoajarticles:oai:doaj.org/article:62f19ee63ec44e32a0c69a342c72c1fd 2023-05-15T15:18:20+02:00 Characterisation of a plancitoxin-1-like DNase II gene in Trichinella spiralis. Chengshui Liao Mingyuan Liu Xue Bai Pan Liu Xuelin Wang Tingting Li Bin Tang He Gao Qingsong Sun Xidong Liu Ying Zhao Feng Wang Xiuping Wu Pascal Boireau Xiaolei Liu 2014-08-01T00:00:00Z https://doi.org/10.1371/journal.pntd.0003097 https://doaj.org/article/62f19ee63ec44e32a0c69a342c72c1fd EN eng Public Library of Science (PLoS) http://europepmc.org/articles/PMC4148230?pdf=render https://doaj.org/toc/1935-2727 https://doaj.org/toc/1935-2735 1935-2727 1935-2735 doi:10.1371/journal.pntd.0003097 https://doaj.org/article/62f19ee63ec44e32a0c69a342c72c1fd PLoS Neglected Tropical Diseases, Vol 8, Iss 8, p e3097 (2014) Arctic medicine. Tropical medicine RC955-962 Public aspects of medicine RA1-1270 article 2014 ftdoajarticles https://doi.org/10.1371/journal.pntd.0003097 2022-12-30T23:08:16Z Deoxyribonuclease II (DNase II) is a well-known acidic endonuclease that catalyses the degradation of DNA into oligonucleotides. Only one or a few genes encoding DNase II have been observed in the genomes of many species. 125 DNase II-like protein family genes were predicted in the Trichinella spiralis (T. spiralis) genome; however, none have been confirmed. DNase II is a monomeric nuclease that contains two copies of a variant HKD motif in the N- and C-termini. Of these 125 genes, only plancitoxin-1 (1095 bp, GenBank accession no. XM_003370715.1) contains the HKD motif in its C-terminus domain.In this study, we cloned and characterised the plancitoxin-1 gene. However, the sequences of plancitoxin-1 cloned from T. spiralis were shorter than the predicted sequences in GenBank. Intriguingly, there were two HKD motifs in the N- and C-termini in the cloned sequences. Therefore, the gene with shorter sequences was named after plancitoxin-1-like (Ts-Pt, 885 bp) and has been deposited in GenBank under accession number KF984291. The recombinant protein (rTs-Pt) was expressed in a prokaryotic expression system and purified by nickel affinity chromatography. Western blot analysis showed that rTs-Pt was recognised by serum from T. spiralis-infected mice; the anti-rTs-Pt serum recognised crude antigens but not ES antigens. The Ts-Pt gene was examined at all T. spiralis developmental stages by real-time quantitative PCR. Immunolocalisation analysis showed that Ts-Pt was distributed throughout newborn larvae (NBL), the tegument of adults (Ad) and muscle larvae (ML). As demonstrated by DNase zymography, the expressed proteins displayed cation-independent DNase activity. rTs-Pt had a narrow optimum pH range in slightly acidic conditions (pH 4 and pH 5), and its optimum temperature was 25°C, 30°C, and 37°C.This study indicated that Ts-Pt was classified as a somatic protein in different T. spiralis developmental stages, and demonstrated for the first time that an expressed DNase II protein from T. spiralis had nuclease activity. Article in Journal/Newspaper Arctic Directory of Open Access Journals: DOAJ Articles Arctic PLoS Neglected Tropical Diseases 8 8 e3097 |
institution |
Open Polar |
collection |
Directory of Open Access Journals: DOAJ Articles |
op_collection_id |
ftdoajarticles |
language |
English |
topic |
Arctic medicine. Tropical medicine RC955-962 Public aspects of medicine RA1-1270 |
spellingShingle |
Arctic medicine. Tropical medicine RC955-962 Public aspects of medicine RA1-1270 Chengshui Liao Mingyuan Liu Xue Bai Pan Liu Xuelin Wang Tingting Li Bin Tang He Gao Qingsong Sun Xidong Liu Ying Zhao Feng Wang Xiuping Wu Pascal Boireau Xiaolei Liu Characterisation of a plancitoxin-1-like DNase II gene in Trichinella spiralis. |
topic_facet |
Arctic medicine. Tropical medicine RC955-962 Public aspects of medicine RA1-1270 |
description |
Deoxyribonuclease II (DNase II) is a well-known acidic endonuclease that catalyses the degradation of DNA into oligonucleotides. Only one or a few genes encoding DNase II have been observed in the genomes of many species. 125 DNase II-like protein family genes were predicted in the Trichinella spiralis (T. spiralis) genome; however, none have been confirmed. DNase II is a monomeric nuclease that contains two copies of a variant HKD motif in the N- and C-termini. Of these 125 genes, only plancitoxin-1 (1095 bp, GenBank accession no. XM_003370715.1) contains the HKD motif in its C-terminus domain.In this study, we cloned and characterised the plancitoxin-1 gene. However, the sequences of plancitoxin-1 cloned from T. spiralis were shorter than the predicted sequences in GenBank. Intriguingly, there were two HKD motifs in the N- and C-termini in the cloned sequences. Therefore, the gene with shorter sequences was named after plancitoxin-1-like (Ts-Pt, 885 bp) and has been deposited in GenBank under accession number KF984291. The recombinant protein (rTs-Pt) was expressed in a prokaryotic expression system and purified by nickel affinity chromatography. Western blot analysis showed that rTs-Pt was recognised by serum from T. spiralis-infected mice; the anti-rTs-Pt serum recognised crude antigens but not ES antigens. The Ts-Pt gene was examined at all T. spiralis developmental stages by real-time quantitative PCR. Immunolocalisation analysis showed that Ts-Pt was distributed throughout newborn larvae (NBL), the tegument of adults (Ad) and muscle larvae (ML). As demonstrated by DNase zymography, the expressed proteins displayed cation-independent DNase activity. rTs-Pt had a narrow optimum pH range in slightly acidic conditions (pH 4 and pH 5), and its optimum temperature was 25°C, 30°C, and 37°C.This study indicated that Ts-Pt was classified as a somatic protein in different T. spiralis developmental stages, and demonstrated for the first time that an expressed DNase II protein from T. spiralis had nuclease activity. |
format |
Article in Journal/Newspaper |
author |
Chengshui Liao Mingyuan Liu Xue Bai Pan Liu Xuelin Wang Tingting Li Bin Tang He Gao Qingsong Sun Xidong Liu Ying Zhao Feng Wang Xiuping Wu Pascal Boireau Xiaolei Liu |
author_facet |
Chengshui Liao Mingyuan Liu Xue Bai Pan Liu Xuelin Wang Tingting Li Bin Tang He Gao Qingsong Sun Xidong Liu Ying Zhao Feng Wang Xiuping Wu Pascal Boireau Xiaolei Liu |
author_sort |
Chengshui Liao |
title |
Characterisation of a plancitoxin-1-like DNase II gene in Trichinella spiralis. |
title_short |
Characterisation of a plancitoxin-1-like DNase II gene in Trichinella spiralis. |
title_full |
Characterisation of a plancitoxin-1-like DNase II gene in Trichinella spiralis. |
title_fullStr |
Characterisation of a plancitoxin-1-like DNase II gene in Trichinella spiralis. |
title_full_unstemmed |
Characterisation of a plancitoxin-1-like DNase II gene in Trichinella spiralis. |
title_sort |
characterisation of a plancitoxin-1-like dnase ii gene in trichinella spiralis. |
publisher |
Public Library of Science (PLoS) |
publishDate |
2014 |
url |
https://doi.org/10.1371/journal.pntd.0003097 https://doaj.org/article/62f19ee63ec44e32a0c69a342c72c1fd |
geographic |
Arctic |
geographic_facet |
Arctic |
genre |
Arctic |
genre_facet |
Arctic |
op_source |
PLoS Neglected Tropical Diseases, Vol 8, Iss 8, p e3097 (2014) |
op_relation |
http://europepmc.org/articles/PMC4148230?pdf=render https://doaj.org/toc/1935-2727 https://doaj.org/toc/1935-2735 1935-2727 1935-2735 doi:10.1371/journal.pntd.0003097 https://doaj.org/article/62f19ee63ec44e32a0c69a342c72c1fd |
op_doi |
https://doi.org/10.1371/journal.pntd.0003097 |
container_title |
PLoS Neglected Tropical Diseases |
container_volume |
8 |
container_issue |
8 |
container_start_page |
e3097 |
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1766348529034330112 |