Comparative molecular microbial ecology of the spring haptophyte bloom in a Greenland arctic oligosaline lake

The Arctic is highly sensitive to increasing global temperatures and is projected to experience dramatic ecological shifts in the next few decades. Oligosaline lakes are common in arctic regions where evaporation surpasses precipitation, however these extreme microbial communities are poorly charact...

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Published in:Frontiers in Microbiology
Main Authors: Susanna eTheroux, Yongsong eHuang, Linda eAmaral-Zettler
Format: Article in Journal/Newspaper
Language:English
Published: Frontiers Media S.A. 2012
Subjects:
Online Access:https://doi.org/10.3389/fmicb.2012.00415
https://doaj.org/article/6033e109185b497ba473810b67a85118
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spelling ftdoajarticles:oai:doaj.org/article:6033e109185b497ba473810b67a85118 2023-05-15T14:43:21+02:00 Comparative molecular microbial ecology of the spring haptophyte bloom in a Greenland arctic oligosaline lake Susanna eTheroux Yongsong eHuang Linda eAmaral-Zettler 2012-12-01T00:00:00Z https://doi.org/10.3389/fmicb.2012.00415 https://doaj.org/article/6033e109185b497ba473810b67a85118 EN eng Frontiers Media S.A. http://journal.frontiersin.org/Journal/10.3389/fmicb.2012.00415/full https://doaj.org/toc/1664-302X 1664-302X doi:10.3389/fmicb.2012.00415 https://doaj.org/article/6033e109185b497ba473810b67a85118 Frontiers in Microbiology, Vol 3 (2012) pyrosequencing Arctic haptophytes alkenones lake bloom Microbiology QR1-502 article 2012 ftdoajarticles https://doi.org/10.3389/fmicb.2012.00415 2022-12-31T12:17:05Z The Arctic is highly sensitive to increasing global temperatures and is projected to experience dramatic ecological shifts in the next few decades. Oligosaline lakes are common in arctic regions where evaporation surpasses precipitation, however these extreme microbial communities are poorly characterized. Many oligosaline lakes, in contrast to freshwater ones, experience annual blooms of haptophyte algae that generate valuable alkenone biomarker records that can be used for paleoclimate reconstruction. These haptophyte algae are globally important, and globally distributed, aquatic phototrophs yet their presence in microbial molecular surveys is scarce. To target haptophytes in a molecular survey, we compared microbial community structure during two haptophyte bloom events in an arctic oligosaline lake, Lake BrayaSø in southwestern Greenland, using high-throughput pyrotag sequencing. Our comparison of two annual bloom events yielded surprisingly low taxon overlap, only 13% for bacterial and 26% for eukaryotic communities, which indicates significant annual variation in the underlying microbial populations. Both the bacterial and eukaryotic communities strongly resembled high-altitude and high-latitude freshwater environments. In spite of high alkenone concentrations in the water column, and corresponding high haptophyte rRNA gene copy numbers, haptophyte pyrotag sequences were not the most abundant eukaryotic tag, suggesting that sequencing biases obscured relative abundance data. With over 170 haptophyte tag sequences, we observed only one haptophyte algal Operational Taxonomic Unit, a prerequisite for accurate paleoclimate reconstruction from the lake sediments. Our study is the first to examine microbial diversity in a Greenland lake using next generation sequencing and the first to target an extreme haptophyte bloom event. Our results provide a context for future explorations of aquatic ecology in the warming arctic. Article in Journal/Newspaper Arctic Greenland Directory of Open Access Journals: DOAJ Articles Arctic Greenland Frontiers in Microbiology 3
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic pyrosequencing
Arctic
haptophytes
alkenones
lake bloom
Microbiology
QR1-502
spellingShingle pyrosequencing
Arctic
haptophytes
alkenones
lake bloom
Microbiology
QR1-502
Susanna eTheroux
Yongsong eHuang
Linda eAmaral-Zettler
Comparative molecular microbial ecology of the spring haptophyte bloom in a Greenland arctic oligosaline lake
topic_facet pyrosequencing
Arctic
haptophytes
alkenones
lake bloom
Microbiology
QR1-502
description The Arctic is highly sensitive to increasing global temperatures and is projected to experience dramatic ecological shifts in the next few decades. Oligosaline lakes are common in arctic regions where evaporation surpasses precipitation, however these extreme microbial communities are poorly characterized. Many oligosaline lakes, in contrast to freshwater ones, experience annual blooms of haptophyte algae that generate valuable alkenone biomarker records that can be used for paleoclimate reconstruction. These haptophyte algae are globally important, and globally distributed, aquatic phototrophs yet their presence in microbial molecular surveys is scarce. To target haptophytes in a molecular survey, we compared microbial community structure during two haptophyte bloom events in an arctic oligosaline lake, Lake BrayaSø in southwestern Greenland, using high-throughput pyrotag sequencing. Our comparison of two annual bloom events yielded surprisingly low taxon overlap, only 13% for bacterial and 26% for eukaryotic communities, which indicates significant annual variation in the underlying microbial populations. Both the bacterial and eukaryotic communities strongly resembled high-altitude and high-latitude freshwater environments. In spite of high alkenone concentrations in the water column, and corresponding high haptophyte rRNA gene copy numbers, haptophyte pyrotag sequences were not the most abundant eukaryotic tag, suggesting that sequencing biases obscured relative abundance data. With over 170 haptophyte tag sequences, we observed only one haptophyte algal Operational Taxonomic Unit, a prerequisite for accurate paleoclimate reconstruction from the lake sediments. Our study is the first to examine microbial diversity in a Greenland lake using next generation sequencing and the first to target an extreme haptophyte bloom event. Our results provide a context for future explorations of aquatic ecology in the warming arctic.
format Article in Journal/Newspaper
author Susanna eTheroux
Yongsong eHuang
Linda eAmaral-Zettler
author_facet Susanna eTheroux
Yongsong eHuang
Linda eAmaral-Zettler
author_sort Susanna eTheroux
title Comparative molecular microbial ecology of the spring haptophyte bloom in a Greenland arctic oligosaline lake
title_short Comparative molecular microbial ecology of the spring haptophyte bloom in a Greenland arctic oligosaline lake
title_full Comparative molecular microbial ecology of the spring haptophyte bloom in a Greenland arctic oligosaline lake
title_fullStr Comparative molecular microbial ecology of the spring haptophyte bloom in a Greenland arctic oligosaline lake
title_full_unstemmed Comparative molecular microbial ecology of the spring haptophyte bloom in a Greenland arctic oligosaline lake
title_sort comparative molecular microbial ecology of the spring haptophyte bloom in a greenland arctic oligosaline lake
publisher Frontiers Media S.A.
publishDate 2012
url https://doi.org/10.3389/fmicb.2012.00415
https://doaj.org/article/6033e109185b497ba473810b67a85118
geographic Arctic
Greenland
geographic_facet Arctic
Greenland
genre Arctic
Greenland
genre_facet Arctic
Greenland
op_source Frontiers in Microbiology, Vol 3 (2012)
op_relation http://journal.frontiersin.org/Journal/10.3389/fmicb.2012.00415/full
https://doaj.org/toc/1664-302X
1664-302X
doi:10.3389/fmicb.2012.00415
https://doaj.org/article/6033e109185b497ba473810b67a85118
op_doi https://doi.org/10.3389/fmicb.2012.00415
container_title Frontiers in Microbiology
container_volume 3
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