New Insights into Lymphocystis Disease Virus Genome Diversity
Lymphocystis disease viruses (LCDVs) are viruses that infect bony fish which has been found in different locations across the globe. Four virus species have been classified by the International Committee on Taxonomy of Viruses (ICTV), despite remarkable discrepancies in genome size. Whole genome seq...
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ftdoajarticles:oai:doaj.org/article:5b7178613f904bea9a724fb8065c53bb 2023-05-15T17:41:23+02:00 New Insights into Lymphocystis Disease Virus Genome Diversity Jessica Benkaroun Sven M. Bergmann Angela Römer-Oberdörfer Menekse Didem Demircan Cüneyt Tamer Gayatri Rajendra Kachh Manfred Weidmann 2022-12-01T00:00:00Z https://doi.org/10.3390/v14122741 https://doaj.org/article/5b7178613f904bea9a724fb8065c53bb EN eng MDPI AG https://www.mdpi.com/1999-4915/14/12/2741 https://doaj.org/toc/1999-4915 doi:10.3390/v14122741 1999-4915 https://doaj.org/article/5b7178613f904bea9a724fb8065c53bb Viruses, Vol 14, Iss 2741, p 2741 (2022) lymphocystis disease virus LCDV1 whole genome nucleocytoplasmic large DNA virus demersal fish Microbiology QR1-502 article 2022 ftdoajarticles https://doi.org/10.3390/v14122741 2022-12-30T19:29:57Z Lymphocystis disease viruses (LCDVs) are viruses that infect bony fish which has been found in different locations across the globe. Four virus species have been classified by the International Committee on Taxonomy of Viruses (ICTV), despite remarkable discrepancies in genome size. Whole genome sequencing and phylogenetic analysis of LCDVs from wild fish from the North Sea and partial sequences from gilthead sea bream of an aquafarm located in the Aegean Sea in Turkey confirm that the LCDV1 genome at 100 kb is approximately half the size of the genomes of LCDV2-4. Since the fish species, of which LCDV1 was isolated, differ taxonomically at the order level, co-speciation can be excluded as the driver of the adaptation of the genome of this nucleocytoplasmic large DNA virus, but may represent an adaptation to the lifestyle of this demersal fish in the northeast Atlantic. Article in Journal/Newspaper Northeast Atlantic Directory of Open Access Journals: DOAJ Articles Viruses 14 12 2741 |
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Directory of Open Access Journals: DOAJ Articles |
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ftdoajarticles |
language |
English |
topic |
lymphocystis disease virus LCDV1 whole genome nucleocytoplasmic large DNA virus demersal fish Microbiology QR1-502 |
spellingShingle |
lymphocystis disease virus LCDV1 whole genome nucleocytoplasmic large DNA virus demersal fish Microbiology QR1-502 Jessica Benkaroun Sven M. Bergmann Angela Römer-Oberdörfer Menekse Didem Demircan Cüneyt Tamer Gayatri Rajendra Kachh Manfred Weidmann New Insights into Lymphocystis Disease Virus Genome Diversity |
topic_facet |
lymphocystis disease virus LCDV1 whole genome nucleocytoplasmic large DNA virus demersal fish Microbiology QR1-502 |
description |
Lymphocystis disease viruses (LCDVs) are viruses that infect bony fish which has been found in different locations across the globe. Four virus species have been classified by the International Committee on Taxonomy of Viruses (ICTV), despite remarkable discrepancies in genome size. Whole genome sequencing and phylogenetic analysis of LCDVs from wild fish from the North Sea and partial sequences from gilthead sea bream of an aquafarm located in the Aegean Sea in Turkey confirm that the LCDV1 genome at 100 kb is approximately half the size of the genomes of LCDV2-4. Since the fish species, of which LCDV1 was isolated, differ taxonomically at the order level, co-speciation can be excluded as the driver of the adaptation of the genome of this nucleocytoplasmic large DNA virus, but may represent an adaptation to the lifestyle of this demersal fish in the northeast Atlantic. |
format |
Article in Journal/Newspaper |
author |
Jessica Benkaroun Sven M. Bergmann Angela Römer-Oberdörfer Menekse Didem Demircan Cüneyt Tamer Gayatri Rajendra Kachh Manfred Weidmann |
author_facet |
Jessica Benkaroun Sven M. Bergmann Angela Römer-Oberdörfer Menekse Didem Demircan Cüneyt Tamer Gayatri Rajendra Kachh Manfred Weidmann |
author_sort |
Jessica Benkaroun |
title |
New Insights into Lymphocystis Disease Virus Genome Diversity |
title_short |
New Insights into Lymphocystis Disease Virus Genome Diversity |
title_full |
New Insights into Lymphocystis Disease Virus Genome Diversity |
title_fullStr |
New Insights into Lymphocystis Disease Virus Genome Diversity |
title_full_unstemmed |
New Insights into Lymphocystis Disease Virus Genome Diversity |
title_sort |
new insights into lymphocystis disease virus genome diversity |
publisher |
MDPI AG |
publishDate |
2022 |
url |
https://doi.org/10.3390/v14122741 https://doaj.org/article/5b7178613f904bea9a724fb8065c53bb |
genre |
Northeast Atlantic |
genre_facet |
Northeast Atlantic |
op_source |
Viruses, Vol 14, Iss 2741, p 2741 (2022) |
op_relation |
https://www.mdpi.com/1999-4915/14/12/2741 https://doaj.org/toc/1999-4915 doi:10.3390/v14122741 1999-4915 https://doaj.org/article/5b7178613f904bea9a724fb8065c53bb |
op_doi |
https://doi.org/10.3390/v14122741 |
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Viruses |
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14 |
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2741 |
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1766142894173847552 |