Global occurrence of the bacteria with capability for extracellular reduction of iodate

The γ-proteobacterium Shewanella oneidensis MR-1 reduces iodate to iodide extracellularly. Both dmsEFAB and mtrCAB gene clusters are involved in extracellular reduction of iodate by S. oneidensis MR-1. DmsEFAB reduces iodate to hypoiodous acid and hydrogen peroxide (H2O2). Subsequently, H2O2 is redu...

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Published in:Frontiers in Microbiology
Main Authors: Jinzhi Guo, Jie Jiang, Zhaofeng Peng, Yuhong Zhong, Yongguang Jiang, Zhou Jiang, Yidan Hu, Yiran Dong, Liang Shi
Format: Article in Journal/Newspaper
Language:English
Published: Frontiers Media S.A. 2022
Subjects:
Online Access:https://doi.org/10.3389/fmicb.2022.1070601
https://doaj.org/article/5a8c57afdaca428bad21dce39e61d730
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spelling ftdoajarticles:oai:doaj.org/article:5a8c57afdaca428bad21dce39e61d730 2023-05-15T13:55:24+02:00 Global occurrence of the bacteria with capability for extracellular reduction of iodate Jinzhi Guo Jie Jiang Zhaofeng Peng Yuhong Zhong Yongguang Jiang Zhou Jiang Yidan Hu Yiran Dong Liang Shi 2022-11-01T00:00:00Z https://doi.org/10.3389/fmicb.2022.1070601 https://doaj.org/article/5a8c57afdaca428bad21dce39e61d730 EN eng Frontiers Media S.A. https://www.frontiersin.org/articles/10.3389/fmicb.2022.1070601/full https://doaj.org/toc/1664-302X 1664-302X doi:10.3389/fmicb.2022.1070601 https://doaj.org/article/5a8c57afdaca428bad21dce39e61d730 Frontiers in Microbiology, Vol 13 (2022) DmsEFAB MtrCAB extracellular reduction of iodate Ferrimonas Shewanella global biogeochemical cycling of iodine Microbiology QR1-502 article 2022 ftdoajarticles https://doi.org/10.3389/fmicb.2022.1070601 2022-12-30T20:08:34Z The γ-proteobacterium Shewanella oneidensis MR-1 reduces iodate to iodide extracellularly. Both dmsEFAB and mtrCAB gene clusters are involved in extracellular reduction of iodate by S. oneidensis MR-1. DmsEFAB reduces iodate to hypoiodous acid and hydrogen peroxide (H2O2). Subsequently, H2O2 is reduced by MtrCAB to facilitate DmsEFAB-mediated extracellular reduction of iodate. To investigate the distribution of bacteria with the capability for extracellular reduction of iodate, bacterial genomes were systematically searched for both dmsEFAB and mtrCAB gene clusters. The dmsEFAB and mtrCAB gene clusters were found in three Ferrimonas and 26 Shewanella species. Coexistence of both dmsEFAB and mtrCAB gene clusters in these bacteria suggests their potentials for extracellular reduction of iodate. Further analyses demonstrated that these bacteria were isolated from a variety of ecosystems, including the lakes, rivers, and subsurface rocks in East and Southeast Asia, North Africa, and North America. Importantly, most of the bacteria with both dmsEFAB and mtrCAB gene clusters were found in different marine environments, which ranged from the Arctic Ocean to Antarctic coastal marine environments as well as from the Atlantic Ocean to the Indian and Pacific Oceans. Widespread distribution of the bacteria with capability for extracellular reduction of iodate around the world suggests their significant importance in global biogeochemical cycling of iodine. The genetic organization of dmsEFAB and mtrCAB gene clusters also varied substantially. The identified mtrCAB gene clusters often contained additional genes for multiheme c-type cytochromes. The numbers of dmsEFAB gene cluster detected in a given bacterial genome ranged from one to six. In latter, duplications of dmsEFAB gene clusters occurred. These results suggest different paths for these bacteria to acquire their capability for extracellular reduction of iodate. Article in Journal/Newspaper Antarc* Antarctic Arctic Arctic Ocean Directory of Open Access Journals: DOAJ Articles Arctic Antarctic Arctic Ocean Pacific Indian Frontiers in Microbiology 13
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic DmsEFAB
MtrCAB
extracellular reduction of iodate
Ferrimonas
Shewanella
global biogeochemical cycling of iodine
Microbiology
QR1-502
spellingShingle DmsEFAB
MtrCAB
extracellular reduction of iodate
Ferrimonas
Shewanella
global biogeochemical cycling of iodine
Microbiology
QR1-502
Jinzhi Guo
Jie Jiang
Zhaofeng Peng
Yuhong Zhong
Yongguang Jiang
Zhou Jiang
Yidan Hu
Yiran Dong
Liang Shi
Global occurrence of the bacteria with capability for extracellular reduction of iodate
topic_facet DmsEFAB
MtrCAB
extracellular reduction of iodate
Ferrimonas
Shewanella
global biogeochemical cycling of iodine
Microbiology
QR1-502
description The γ-proteobacterium Shewanella oneidensis MR-1 reduces iodate to iodide extracellularly. Both dmsEFAB and mtrCAB gene clusters are involved in extracellular reduction of iodate by S. oneidensis MR-1. DmsEFAB reduces iodate to hypoiodous acid and hydrogen peroxide (H2O2). Subsequently, H2O2 is reduced by MtrCAB to facilitate DmsEFAB-mediated extracellular reduction of iodate. To investigate the distribution of bacteria with the capability for extracellular reduction of iodate, bacterial genomes were systematically searched for both dmsEFAB and mtrCAB gene clusters. The dmsEFAB and mtrCAB gene clusters were found in three Ferrimonas and 26 Shewanella species. Coexistence of both dmsEFAB and mtrCAB gene clusters in these bacteria suggests their potentials for extracellular reduction of iodate. Further analyses demonstrated that these bacteria were isolated from a variety of ecosystems, including the lakes, rivers, and subsurface rocks in East and Southeast Asia, North Africa, and North America. Importantly, most of the bacteria with both dmsEFAB and mtrCAB gene clusters were found in different marine environments, which ranged from the Arctic Ocean to Antarctic coastal marine environments as well as from the Atlantic Ocean to the Indian and Pacific Oceans. Widespread distribution of the bacteria with capability for extracellular reduction of iodate around the world suggests their significant importance in global biogeochemical cycling of iodine. The genetic organization of dmsEFAB and mtrCAB gene clusters also varied substantially. The identified mtrCAB gene clusters often contained additional genes for multiheme c-type cytochromes. The numbers of dmsEFAB gene cluster detected in a given bacterial genome ranged from one to six. In latter, duplications of dmsEFAB gene clusters occurred. These results suggest different paths for these bacteria to acquire their capability for extracellular reduction of iodate.
format Article in Journal/Newspaper
author Jinzhi Guo
Jie Jiang
Zhaofeng Peng
Yuhong Zhong
Yongguang Jiang
Zhou Jiang
Yidan Hu
Yiran Dong
Liang Shi
author_facet Jinzhi Guo
Jie Jiang
Zhaofeng Peng
Yuhong Zhong
Yongguang Jiang
Zhou Jiang
Yidan Hu
Yiran Dong
Liang Shi
author_sort Jinzhi Guo
title Global occurrence of the bacteria with capability for extracellular reduction of iodate
title_short Global occurrence of the bacteria with capability for extracellular reduction of iodate
title_full Global occurrence of the bacteria with capability for extracellular reduction of iodate
title_fullStr Global occurrence of the bacteria with capability for extracellular reduction of iodate
title_full_unstemmed Global occurrence of the bacteria with capability for extracellular reduction of iodate
title_sort global occurrence of the bacteria with capability for extracellular reduction of iodate
publisher Frontiers Media S.A.
publishDate 2022
url https://doi.org/10.3389/fmicb.2022.1070601
https://doaj.org/article/5a8c57afdaca428bad21dce39e61d730
geographic Arctic
Antarctic
Arctic Ocean
Pacific
Indian
geographic_facet Arctic
Antarctic
Arctic Ocean
Pacific
Indian
genre Antarc*
Antarctic
Arctic
Arctic Ocean
genre_facet Antarc*
Antarctic
Arctic
Arctic Ocean
op_source Frontiers in Microbiology, Vol 13 (2022)
op_relation https://www.frontiersin.org/articles/10.3389/fmicb.2022.1070601/full
https://doaj.org/toc/1664-302X
1664-302X
doi:10.3389/fmicb.2022.1070601
https://doaj.org/article/5a8c57afdaca428bad21dce39e61d730
op_doi https://doi.org/10.3389/fmicb.2022.1070601
container_title Frontiers in Microbiology
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