Transcriptomic Analysis and Time to Hatch Visual Prediction of Embryo Development in the Ornate Spiny Lobster (Panulirus ornatus)

The ability to conduct closed life-cycle culture of tropical spiny lobsters, Panulirus ornatus, at the Institute for Marine and Antarctic Studies (IMAS) provides a unique opportunity to investigate specific developmental stages during embryogenesis. The production of closed life-cycle lobsters provi...

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Published in:Frontiers in Marine Science
Main Authors: Courtney L. Lewis, Quinn P. Fitzgibbon, Gregory G. Smith, Abigail Elizur, Tomer Ventura
Format: Article in Journal/Newspaper
Language:English
Published: Frontiers Media S.A. 2022
Subjects:
Q
Online Access:https://doi.org/10.3389/fmars.2022.889317
https://doaj.org/article/5746ee3f6b874e4e835654ee8388b672
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spelling ftdoajarticles:oai:doaj.org/article:5746ee3f6b874e4e835654ee8388b672 2023-05-15T14:02:40+02:00 Transcriptomic Analysis and Time to Hatch Visual Prediction of Embryo Development in the Ornate Spiny Lobster (Panulirus ornatus) Courtney L. Lewis Quinn P. Fitzgibbon Gregory G. Smith Abigail Elizur Tomer Ventura 2022-07-01T00:00:00Z https://doi.org/10.3389/fmars.2022.889317 https://doaj.org/article/5746ee3f6b874e4e835654ee8388b672 EN eng Frontiers Media S.A. https://www.frontiersin.org/articles/10.3389/fmars.2022.889317/full https://doaj.org/toc/2296-7745 2296-7745 doi:10.3389/fmars.2022.889317 https://doaj.org/article/5746ee3f6b874e4e835654ee8388b672 Frontiers in Marine Science, Vol 9 (2022) Panulirus ornatus transcriptomics embryogenesis gastrula neuropeptides hatch prediction Science Q General. Including nature conservation geographical distribution QH1-199.5 article 2022 ftdoajarticles https://doi.org/10.3389/fmars.2022.889317 2022-12-31T02:00:52Z The ability to conduct closed life-cycle culture of tropical spiny lobsters, Panulirus ornatus, at the Institute for Marine and Antarctic Studies (IMAS) provides a unique opportunity to investigate specific developmental stages during embryogenesis. The production of closed life-cycle lobsters provides access to embryos at defined time points, yet physical staging is challenging due to their small size and environmental factors impacting their development. A transcriptome comprising 11 distinct stages across the 30-day P. ornatus embryonal development period allowed the establishment of the most detailed transcriptomic library of embryogenesis across decapods. A series of key genes across the 11 stages of embryonal development were characterized. The expression of neuropeptides was reported across P. ornatus embryos, suggesting they are primarily active during the later stages of embryogenesis as the nervous system develops and the animal prepares to hatch. Gastrula-specific genes, nanos and brachyury, presented an expression profile indicating gastrulation occurs early in embryogenesis. In addition to the molecular tools used to characterize embryo development, certain developmental characteristics, such as eye spot development, provide a measurable indicator that can be visualised. Hatch prediction models based on visual characteristics were shown to be an accurate method to predict the timing of the hatch for P. ornatus embryos kept at 26°C. The combination of morphological and visual measures with transcriptomics can be used to further define and establish the groundwork for future characterisation and staging of P. ornatus embryogenesis. Article in Journal/Newspaper Antarc* Antarctic Institute for Marine and Antarctic Studies Directory of Open Access Journals: DOAJ Articles Antarctic Frontiers in Marine Science 9
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Panulirus ornatus
transcriptomics
embryogenesis
gastrula
neuropeptides
hatch prediction
Science
Q
General. Including nature conservation
geographical distribution
QH1-199.5
spellingShingle Panulirus ornatus
transcriptomics
embryogenesis
gastrula
neuropeptides
hatch prediction
Science
Q
General. Including nature conservation
geographical distribution
QH1-199.5
Courtney L. Lewis
Quinn P. Fitzgibbon
Gregory G. Smith
Abigail Elizur
Tomer Ventura
Transcriptomic Analysis and Time to Hatch Visual Prediction of Embryo Development in the Ornate Spiny Lobster (Panulirus ornatus)
topic_facet Panulirus ornatus
transcriptomics
embryogenesis
gastrula
neuropeptides
hatch prediction
Science
Q
General. Including nature conservation
geographical distribution
QH1-199.5
description The ability to conduct closed life-cycle culture of tropical spiny lobsters, Panulirus ornatus, at the Institute for Marine and Antarctic Studies (IMAS) provides a unique opportunity to investigate specific developmental stages during embryogenesis. The production of closed life-cycle lobsters provides access to embryos at defined time points, yet physical staging is challenging due to their small size and environmental factors impacting their development. A transcriptome comprising 11 distinct stages across the 30-day P. ornatus embryonal development period allowed the establishment of the most detailed transcriptomic library of embryogenesis across decapods. A series of key genes across the 11 stages of embryonal development were characterized. The expression of neuropeptides was reported across P. ornatus embryos, suggesting they are primarily active during the later stages of embryogenesis as the nervous system develops and the animal prepares to hatch. Gastrula-specific genes, nanos and brachyury, presented an expression profile indicating gastrulation occurs early in embryogenesis. In addition to the molecular tools used to characterize embryo development, certain developmental characteristics, such as eye spot development, provide a measurable indicator that can be visualised. Hatch prediction models based on visual characteristics were shown to be an accurate method to predict the timing of the hatch for P. ornatus embryos kept at 26°C. The combination of morphological and visual measures with transcriptomics can be used to further define and establish the groundwork for future characterisation and staging of P. ornatus embryogenesis.
format Article in Journal/Newspaper
author Courtney L. Lewis
Quinn P. Fitzgibbon
Gregory G. Smith
Abigail Elizur
Tomer Ventura
author_facet Courtney L. Lewis
Quinn P. Fitzgibbon
Gregory G. Smith
Abigail Elizur
Tomer Ventura
author_sort Courtney L. Lewis
title Transcriptomic Analysis and Time to Hatch Visual Prediction of Embryo Development in the Ornate Spiny Lobster (Panulirus ornatus)
title_short Transcriptomic Analysis and Time to Hatch Visual Prediction of Embryo Development in the Ornate Spiny Lobster (Panulirus ornatus)
title_full Transcriptomic Analysis and Time to Hatch Visual Prediction of Embryo Development in the Ornate Spiny Lobster (Panulirus ornatus)
title_fullStr Transcriptomic Analysis and Time to Hatch Visual Prediction of Embryo Development in the Ornate Spiny Lobster (Panulirus ornatus)
title_full_unstemmed Transcriptomic Analysis and Time to Hatch Visual Prediction of Embryo Development in the Ornate Spiny Lobster (Panulirus ornatus)
title_sort transcriptomic analysis and time to hatch visual prediction of embryo development in the ornate spiny lobster (panulirus ornatus)
publisher Frontiers Media S.A.
publishDate 2022
url https://doi.org/10.3389/fmars.2022.889317
https://doaj.org/article/5746ee3f6b874e4e835654ee8388b672
geographic Antarctic
geographic_facet Antarctic
genre Antarc*
Antarctic
Institute for Marine and Antarctic Studies
genre_facet Antarc*
Antarctic
Institute for Marine and Antarctic Studies
op_source Frontiers in Marine Science, Vol 9 (2022)
op_relation https://www.frontiersin.org/articles/10.3389/fmars.2022.889317/full
https://doaj.org/toc/2296-7745
2296-7745
doi:10.3389/fmars.2022.889317
https://doaj.org/article/5746ee3f6b874e4e835654ee8388b672
op_doi https://doi.org/10.3389/fmars.2022.889317
container_title Frontiers in Marine Science
container_volume 9
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