Wolf genetic diversity compared across Europe using the yardstick method
Abstract Integrating data across studies with traditional microsatellite genetic markers requires careful calibration and represents an obstacle for investigation of wide-ranging species where populations require transboundary management. We used the “yardstick” method to compare results published a...
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ftdoajarticles:oai:doaj.org/article:570708cd4d8f4808b96682fc66c79099 2023-10-01T03:55:17+02:00 Wolf genetic diversity compared across Europe using the yardstick method Maja Jan Astrid Vik Stronen Barbara Boljte Rok Černe Đuro Huber Ruben Iosif Franc Kljun Marjeta Konec Ivan Kos Miha Krofel Josip Kusak Roman Luštrik Aleksandra Majić Skrbinšek Barbara Promberger–Füerpass Hubert Potočnik Robin Rigg Peter Trontelj Tomaž Skrbinšek 2023-08-01T00:00:00Z https://doi.org/10.1038/s41598-023-40834-x https://doaj.org/article/570708cd4d8f4808b96682fc66c79099 EN eng Nature Portfolio https://doi.org/10.1038/s41598-023-40834-x https://doaj.org/toc/2045-2322 doi:10.1038/s41598-023-40834-x 2045-2322 https://doaj.org/article/570708cd4d8f4808b96682fc66c79099 Scientific Reports, Vol 13, Iss 1, Pp 1-10 (2023) Medicine R Science Q article 2023 ftdoajarticles https://doi.org/10.1038/s41598-023-40834-x 2023-09-03T00:54:48Z Abstract Integrating data across studies with traditional microsatellite genetic markers requires careful calibration and represents an obstacle for investigation of wide-ranging species where populations require transboundary management. We used the “yardstick” method to compare results published across Europe since 2002 and new wolf (Canis lupus) genetic profiles from the Carpathian Mountains in Central Europe and the Dinaric Mountains in Southeastern Europe, with the latter as our reference population. We compared each population with Dinaric wolves, considering only shared markers (range 4–17). For each population, we calculated standard genetic diversity indices plus calibrated heterozygosity (Hec) and allelic richness (Ac). Hec and Ac in Dinaric (0.704 and 9.394) and Carpathian wolves (0.695 and 7.023) were comparable to those observed in other large and mid-sized European populations, but smaller than those of northeastern Europe. Major discrepancies in marker choices among some studies made comparisons more difficult. However, the yardstick method, including the new measures of Hec and Ac, provided a direct comparison of genetic diversity values among wolf populations and an intuitive interpretation of the results. The yardstick method thus permitted the integration of diverse sources of publicly available microsatellite data for spatiotemporal genetic monitoring of evolutionary potential. Article in Journal/Newspaper Canis lupus Directory of Open Access Journals: DOAJ Articles Scientific Reports 13 1 |
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Directory of Open Access Journals: DOAJ Articles |
op_collection_id |
ftdoajarticles |
language |
English |
topic |
Medicine R Science Q |
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Medicine R Science Q Maja Jan Astrid Vik Stronen Barbara Boljte Rok Černe Đuro Huber Ruben Iosif Franc Kljun Marjeta Konec Ivan Kos Miha Krofel Josip Kusak Roman Luštrik Aleksandra Majić Skrbinšek Barbara Promberger–Füerpass Hubert Potočnik Robin Rigg Peter Trontelj Tomaž Skrbinšek Wolf genetic diversity compared across Europe using the yardstick method |
topic_facet |
Medicine R Science Q |
description |
Abstract Integrating data across studies with traditional microsatellite genetic markers requires careful calibration and represents an obstacle for investigation of wide-ranging species where populations require transboundary management. We used the “yardstick” method to compare results published across Europe since 2002 and new wolf (Canis lupus) genetic profiles from the Carpathian Mountains in Central Europe and the Dinaric Mountains in Southeastern Europe, with the latter as our reference population. We compared each population with Dinaric wolves, considering only shared markers (range 4–17). For each population, we calculated standard genetic diversity indices plus calibrated heterozygosity (Hec) and allelic richness (Ac). Hec and Ac in Dinaric (0.704 and 9.394) and Carpathian wolves (0.695 and 7.023) were comparable to those observed in other large and mid-sized European populations, but smaller than those of northeastern Europe. Major discrepancies in marker choices among some studies made comparisons more difficult. However, the yardstick method, including the new measures of Hec and Ac, provided a direct comparison of genetic diversity values among wolf populations and an intuitive interpretation of the results. The yardstick method thus permitted the integration of diverse sources of publicly available microsatellite data for spatiotemporal genetic monitoring of evolutionary potential. |
format |
Article in Journal/Newspaper |
author |
Maja Jan Astrid Vik Stronen Barbara Boljte Rok Černe Đuro Huber Ruben Iosif Franc Kljun Marjeta Konec Ivan Kos Miha Krofel Josip Kusak Roman Luštrik Aleksandra Majić Skrbinšek Barbara Promberger–Füerpass Hubert Potočnik Robin Rigg Peter Trontelj Tomaž Skrbinšek |
author_facet |
Maja Jan Astrid Vik Stronen Barbara Boljte Rok Černe Đuro Huber Ruben Iosif Franc Kljun Marjeta Konec Ivan Kos Miha Krofel Josip Kusak Roman Luštrik Aleksandra Majić Skrbinšek Barbara Promberger–Füerpass Hubert Potočnik Robin Rigg Peter Trontelj Tomaž Skrbinšek |
author_sort |
Maja Jan |
title |
Wolf genetic diversity compared across Europe using the yardstick method |
title_short |
Wolf genetic diversity compared across Europe using the yardstick method |
title_full |
Wolf genetic diversity compared across Europe using the yardstick method |
title_fullStr |
Wolf genetic diversity compared across Europe using the yardstick method |
title_full_unstemmed |
Wolf genetic diversity compared across Europe using the yardstick method |
title_sort |
wolf genetic diversity compared across europe using the yardstick method |
publisher |
Nature Portfolio |
publishDate |
2023 |
url |
https://doi.org/10.1038/s41598-023-40834-x https://doaj.org/article/570708cd4d8f4808b96682fc66c79099 |
genre |
Canis lupus |
genre_facet |
Canis lupus |
op_source |
Scientific Reports, Vol 13, Iss 1, Pp 1-10 (2023) |
op_relation |
https://doi.org/10.1038/s41598-023-40834-x https://doaj.org/toc/2045-2322 doi:10.1038/s41598-023-40834-x 2045-2322 https://doaj.org/article/570708cd4d8f4808b96682fc66c79099 |
op_doi |
https://doi.org/10.1038/s41598-023-40834-x |
container_title |
Scientific Reports |
container_volume |
13 |
container_issue |
1 |
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1778523641032474624 |