The complete chloroplast genome of an Arctic lycophyte, Huperzia arctica (Tolm.) Sipliv. 1973 (Lycopodiaceae)
AbstractHuperzia arctica (Tolm.) Sipliv. 1973 is a lycophyte species belonging to the Lycopodiaceae family, which is widely distributed in the Arctic region of Svalbard, Norway. To determine its taxonomic position, we sequenced the chloroplast genome of H. arctica. The complete chloroplast genome of...
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2023
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ftdoajarticles:oai:doaj.org/article:52a03b55889f42548ab0866dc2783217 2024-09-09T19:20:19+00:00 The complete chloroplast genome of an Arctic lycophyte, Huperzia arctica (Tolm.) Sipliv. 1973 (Lycopodiaceae) Youngsim Hwang Yoo Kyung Lee Yowhan Son Hyoungseok Lee 2023-12-01T00:00:00Z https://doi.org/10.1080/23802359.2023.2292144 https://doaj.org/article/52a03b55889f42548ab0866dc2783217 EN eng Taylor & Francis Group https://www.tandfonline.com/doi/10.1080/23802359.2023.2292144 https://doaj.org/toc/2380-2359 doi:10.1080/23802359.2023.2292144 2380-2359 https://doaj.org/article/52a03b55889f42548ab0866dc2783217 Mitochondrial DNA. Part B. Resources, Vol 8, Iss 12, Pp 1391-1395 (2023) Arctic chloroplast genome huperzia arctica lycopodiaceae phylogeny Genetics QH426-470 article 2023 ftdoajarticles https://doi.org/10.1080/23802359.2023.2292144 2024-08-05T17:49:46Z AbstractHuperzia arctica (Tolm.) Sipliv. 1973 is a lycophyte species belonging to the Lycopodiaceae family, which is widely distributed in the Arctic region of Svalbard, Norway. To determine its taxonomic position, we sequenced the chloroplast genome of H. arctica. The complete chloroplast genome of H. arctica is 153,956 bp in length with 122 annotated genes, including 87 protein-coding genes, 31 tRNA genes, and 4 rRNA genes. To evaluate its evolutionary position, we performed phylogenetic analysis using 36 conserved orthologous protein-coding gene sequences from the chloroplast genomes of H. arctica and publicly available data from other Lycopodiaceae. H. arctica formed a monophyletic group with four other Huperzia species: H. lucidula, H. serrata, H. crispata, and H. javanica. However, it appeared as a separate species with a highly supported bootstrap value. Article in Journal/Newspaper Arctic Svalbard Directory of Open Access Journals: DOAJ Articles Arctic Svalbard Norway Mitochondrial DNA Part B 8 12 1391 1395 |
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Open Polar |
collection |
Directory of Open Access Journals: DOAJ Articles |
op_collection_id |
ftdoajarticles |
language |
English |
topic |
Arctic chloroplast genome huperzia arctica lycopodiaceae phylogeny Genetics QH426-470 |
spellingShingle |
Arctic chloroplast genome huperzia arctica lycopodiaceae phylogeny Genetics QH426-470 Youngsim Hwang Yoo Kyung Lee Yowhan Son Hyoungseok Lee The complete chloroplast genome of an Arctic lycophyte, Huperzia arctica (Tolm.) Sipliv. 1973 (Lycopodiaceae) |
topic_facet |
Arctic chloroplast genome huperzia arctica lycopodiaceae phylogeny Genetics QH426-470 |
description |
AbstractHuperzia arctica (Tolm.) Sipliv. 1973 is a lycophyte species belonging to the Lycopodiaceae family, which is widely distributed in the Arctic region of Svalbard, Norway. To determine its taxonomic position, we sequenced the chloroplast genome of H. arctica. The complete chloroplast genome of H. arctica is 153,956 bp in length with 122 annotated genes, including 87 protein-coding genes, 31 tRNA genes, and 4 rRNA genes. To evaluate its evolutionary position, we performed phylogenetic analysis using 36 conserved orthologous protein-coding gene sequences from the chloroplast genomes of H. arctica and publicly available data from other Lycopodiaceae. H. arctica formed a monophyletic group with four other Huperzia species: H. lucidula, H. serrata, H. crispata, and H. javanica. However, it appeared as a separate species with a highly supported bootstrap value. |
format |
Article in Journal/Newspaper |
author |
Youngsim Hwang Yoo Kyung Lee Yowhan Son Hyoungseok Lee |
author_facet |
Youngsim Hwang Yoo Kyung Lee Yowhan Son Hyoungseok Lee |
author_sort |
Youngsim Hwang |
title |
The complete chloroplast genome of an Arctic lycophyte, Huperzia arctica (Tolm.) Sipliv. 1973 (Lycopodiaceae) |
title_short |
The complete chloroplast genome of an Arctic lycophyte, Huperzia arctica (Tolm.) Sipliv. 1973 (Lycopodiaceae) |
title_full |
The complete chloroplast genome of an Arctic lycophyte, Huperzia arctica (Tolm.) Sipliv. 1973 (Lycopodiaceae) |
title_fullStr |
The complete chloroplast genome of an Arctic lycophyte, Huperzia arctica (Tolm.) Sipliv. 1973 (Lycopodiaceae) |
title_full_unstemmed |
The complete chloroplast genome of an Arctic lycophyte, Huperzia arctica (Tolm.) Sipliv. 1973 (Lycopodiaceae) |
title_sort |
complete chloroplast genome of an arctic lycophyte, huperzia arctica (tolm.) sipliv. 1973 (lycopodiaceae) |
publisher |
Taylor & Francis Group |
publishDate |
2023 |
url |
https://doi.org/10.1080/23802359.2023.2292144 https://doaj.org/article/52a03b55889f42548ab0866dc2783217 |
geographic |
Arctic Svalbard Norway |
geographic_facet |
Arctic Svalbard Norway |
genre |
Arctic Svalbard |
genre_facet |
Arctic Svalbard |
op_source |
Mitochondrial DNA. Part B. Resources, Vol 8, Iss 12, Pp 1391-1395 (2023) |
op_relation |
https://www.tandfonline.com/doi/10.1080/23802359.2023.2292144 https://doaj.org/toc/2380-2359 doi:10.1080/23802359.2023.2292144 2380-2359 https://doaj.org/article/52a03b55889f42548ab0866dc2783217 |
op_doi |
https://doi.org/10.1080/23802359.2023.2292144 |
container_title |
Mitochondrial DNA Part B |
container_volume |
8 |
container_issue |
12 |
container_start_page |
1391 |
op_container_end_page |
1395 |
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1809760454873972736 |