Linking extreme seasonality and gene expression in Arctic marine protists

Abstract At high latitudes, strong seasonal differences in light availability affect marine organisms and regulate the timing of ecosystem processes. Marine protists are key players in Arctic aquatic ecosystems, yet little is known about their ecological roles over yearly cycles. This is especially...

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Published in:Scientific Reports
Main Authors: Magdalena Wutkowska, Anna Vader, Ramiro Logares, Eric Pelletier, Tove M. Gabrielsen
Format: Article in Journal/Newspaper
Language:English
Published: Nature Portfolio 2023
Subjects:
R
Q
Online Access:https://doi.org/10.1038/s41598-023-41204-3
https://doaj.org/article/52606d57ce4f47e987fe4b8eebaf8b3a
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spelling ftdoajarticles:oai:doaj.org/article:52606d57ce4f47e987fe4b8eebaf8b3a 2023-10-09T21:48:02+02:00 Linking extreme seasonality and gene expression in Arctic marine protists Magdalena Wutkowska Anna Vader Ramiro Logares Eric Pelletier Tove M. Gabrielsen 2023-09-01T00:00:00Z https://doi.org/10.1038/s41598-023-41204-3 https://doaj.org/article/52606d57ce4f47e987fe4b8eebaf8b3a EN eng Nature Portfolio https://doi.org/10.1038/s41598-023-41204-3 https://doaj.org/toc/2045-2322 doi:10.1038/s41598-023-41204-3 2045-2322 https://doaj.org/article/52606d57ce4f47e987fe4b8eebaf8b3a Scientific Reports, Vol 13, Iss 1, Pp 1-15 (2023) Medicine R Science Q article 2023 ftdoajarticles https://doi.org/10.1038/s41598-023-41204-3 2023-09-17T00:39:30Z Abstract At high latitudes, strong seasonal differences in light availability affect marine organisms and regulate the timing of ecosystem processes. Marine protists are key players in Arctic aquatic ecosystems, yet little is known about their ecological roles over yearly cycles. This is especially true for the dark polar night period, which up until recently was assumed to be devoid of biological activity. A 12 million transcripts catalogue was built from 0.45 to 10 μm protist assemblages sampled over 13 months in a time series station in an Arctic fjord in Svalbard. Community gene expression was correlated with seasonality, with light as the main driving factor. Transcript diversity and evenness were higher during polar night compared to polar day. Light-dependent functions had higher relative expression during polar day, except phototransduction. 64% of the most expressed genes could not be functionally annotated, yet up to 78% were identified in Arctic samples from Tara Oceans, suggesting that Arctic marine assemblages are distinct from those from other oceans. Our study increases understanding of the links between extreme seasonality and biological processes in pico- and nanoplanktonic protists. Our results set the ground for future monitoring studies investigating the seasonal impact of climate change on the communities of microbial eukaryotes in the High Arctic. Article in Journal/Newspaper Arctic Climate change polar night Svalbard Directory of Open Access Journals: DOAJ Articles Arctic Svalbard Scientific Reports 13 1
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Medicine
R
Science
Q
spellingShingle Medicine
R
Science
Q
Magdalena Wutkowska
Anna Vader
Ramiro Logares
Eric Pelletier
Tove M. Gabrielsen
Linking extreme seasonality and gene expression in Arctic marine protists
topic_facet Medicine
R
Science
Q
description Abstract At high latitudes, strong seasonal differences in light availability affect marine organisms and regulate the timing of ecosystem processes. Marine protists are key players in Arctic aquatic ecosystems, yet little is known about their ecological roles over yearly cycles. This is especially true for the dark polar night period, which up until recently was assumed to be devoid of biological activity. A 12 million transcripts catalogue was built from 0.45 to 10 μm protist assemblages sampled over 13 months in a time series station in an Arctic fjord in Svalbard. Community gene expression was correlated with seasonality, with light as the main driving factor. Transcript diversity and evenness were higher during polar night compared to polar day. Light-dependent functions had higher relative expression during polar day, except phototransduction. 64% of the most expressed genes could not be functionally annotated, yet up to 78% were identified in Arctic samples from Tara Oceans, suggesting that Arctic marine assemblages are distinct from those from other oceans. Our study increases understanding of the links between extreme seasonality and biological processes in pico- and nanoplanktonic protists. Our results set the ground for future monitoring studies investigating the seasonal impact of climate change on the communities of microbial eukaryotes in the High Arctic.
format Article in Journal/Newspaper
author Magdalena Wutkowska
Anna Vader
Ramiro Logares
Eric Pelletier
Tove M. Gabrielsen
author_facet Magdalena Wutkowska
Anna Vader
Ramiro Logares
Eric Pelletier
Tove M. Gabrielsen
author_sort Magdalena Wutkowska
title Linking extreme seasonality and gene expression in Arctic marine protists
title_short Linking extreme seasonality and gene expression in Arctic marine protists
title_full Linking extreme seasonality and gene expression in Arctic marine protists
title_fullStr Linking extreme seasonality and gene expression in Arctic marine protists
title_full_unstemmed Linking extreme seasonality and gene expression in Arctic marine protists
title_sort linking extreme seasonality and gene expression in arctic marine protists
publisher Nature Portfolio
publishDate 2023
url https://doi.org/10.1038/s41598-023-41204-3
https://doaj.org/article/52606d57ce4f47e987fe4b8eebaf8b3a
geographic Arctic
Svalbard
geographic_facet Arctic
Svalbard
genre Arctic
Climate change
polar night
Svalbard
genre_facet Arctic
Climate change
polar night
Svalbard
op_source Scientific Reports, Vol 13, Iss 1, Pp 1-15 (2023)
op_relation https://doi.org/10.1038/s41598-023-41204-3
https://doaj.org/toc/2045-2322
doi:10.1038/s41598-023-41204-3
2045-2322
https://doaj.org/article/52606d57ce4f47e987fe4b8eebaf8b3a
op_doi https://doi.org/10.1038/s41598-023-41204-3
container_title Scientific Reports
container_volume 13
container_issue 1
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