Mitochondrial DNA-based investigation of dead rorqual (Cetacea: Balaenopteridae) from the west coast of India

The study assessed the utility of mitochondrial DNA for identifying a deceased rorqual discovered off the western coast of India. Both the COI and Cytb genes exhibited remarkable 99-100% similarity with the GenBank sequence of Balaenoptera musculus through a global BLAST search, confirming their aff...

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Published in:Fisheries and Aquatic Sciences
Main Authors: Shantanu Kundu, Manokaran Kamalakannan, Dhriti Banerjee, Flandrianto Sih Palimirmo, Arif Wibowo, Hyun-Woo Kim
Format: Article in Journal/Newspaper
Language:English
Published: The Korean Society of Fisheries and Aquatic Science 2024
Subjects:
Online Access:https://doi.org/10.47853/FAS.2024.e6
https://doaj.org/article/4fe87fbc9d454be98443a3fdafd890a9
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spelling ftdoajarticles:oai:doaj.org/article:4fe87fbc9d454be98443a3fdafd890a9 2024-09-15T17:57:18+00:00 Mitochondrial DNA-based investigation of dead rorqual (Cetacea: Balaenopteridae) from the west coast of India Shantanu Kundu Manokaran Kamalakannan Dhriti Banerjee Flandrianto Sih Palimirmo Arif Wibowo Hyun-Woo Kim 2024-01-01T00:00:00Z https://doi.org/10.47853/FAS.2024.e6 https://doaj.org/article/4fe87fbc9d454be98443a3fdafd890a9 EN eng The Korean Society of Fisheries and Aquatic Science http://www.e-fas.org/archive/view_article?doi=10.47853/FAS.2024.e6 https://doaj.org/toc/2234-1757 doi:10.47853/FAS.2024.e6 2234-1757 https://doaj.org/article/4fe87fbc9d454be98443a3fdafd890a9 Fisheries and Aquatic Sciences, Vol 27, Iss 1, Pp 48-55 (2024) Indian Ocean Cetaceans Matrilineal phylogeny Important Marine Mammal Areas (IMMAs) Conservation Aquaculture. Fisheries. Angling SH1-691 article 2024 ftdoajarticles https://doi.org/10.47853/FAS.2024.e6 2024-08-05T17:49:25Z The study assessed the utility of mitochondrial DNA for identifying a deceased rorqual discovered off the western coast of India. Both the COI and Cytb genes exhibited remarkable 99-100% similarity with the GenBank sequence of Balaenoptera musculus through a global BLAST search, confirming their affiliation with this species. Inter-species genetic distances for COI and Cytb genes ranged from 6.75% to 9.80% and 7.37% to 10.96% respectively, compared with other Balaenopteridae species. The Bayesian phylogenies constructed based on both COI and Cytb genes demonstrated clear and separate clustering for all Balaenopteridae species, further reaffirming their distinctiveness, while concurrently revealing a cohesive clustering pattern of the generated sequences within the B. musculus clade. Beyond species confirmation, this study provides valuable insights into the presence of live and deceased B. musculus individuals within Indian marine ecosystems. This information holds significant potential for guiding conservation efforts aimed at safeguarding Important Marine Mammal Areas (IMMAs) in India over the long term. Article in Journal/Newspaper Balaenoptera musculus Directory of Open Access Journals: DOAJ Articles Fisheries and Aquatic Sciences 27 1 48 55
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Indian Ocean
Cetaceans
Matrilineal phylogeny
Important Marine Mammal Areas (IMMAs)
Conservation
Aquaculture. Fisheries. Angling
SH1-691
spellingShingle Indian Ocean
Cetaceans
Matrilineal phylogeny
Important Marine Mammal Areas (IMMAs)
Conservation
Aquaculture. Fisheries. Angling
SH1-691
Shantanu Kundu
Manokaran Kamalakannan
Dhriti Banerjee
Flandrianto Sih Palimirmo
Arif Wibowo
Hyun-Woo Kim
Mitochondrial DNA-based investigation of dead rorqual (Cetacea: Balaenopteridae) from the west coast of India
topic_facet Indian Ocean
Cetaceans
Matrilineal phylogeny
Important Marine Mammal Areas (IMMAs)
Conservation
Aquaculture. Fisheries. Angling
SH1-691
description The study assessed the utility of mitochondrial DNA for identifying a deceased rorqual discovered off the western coast of India. Both the COI and Cytb genes exhibited remarkable 99-100% similarity with the GenBank sequence of Balaenoptera musculus through a global BLAST search, confirming their affiliation with this species. Inter-species genetic distances for COI and Cytb genes ranged from 6.75% to 9.80% and 7.37% to 10.96% respectively, compared with other Balaenopteridae species. The Bayesian phylogenies constructed based on both COI and Cytb genes demonstrated clear and separate clustering for all Balaenopteridae species, further reaffirming their distinctiveness, while concurrently revealing a cohesive clustering pattern of the generated sequences within the B. musculus clade. Beyond species confirmation, this study provides valuable insights into the presence of live and deceased B. musculus individuals within Indian marine ecosystems. This information holds significant potential for guiding conservation efforts aimed at safeguarding Important Marine Mammal Areas (IMMAs) in India over the long term.
format Article in Journal/Newspaper
author Shantanu Kundu
Manokaran Kamalakannan
Dhriti Banerjee
Flandrianto Sih Palimirmo
Arif Wibowo
Hyun-Woo Kim
author_facet Shantanu Kundu
Manokaran Kamalakannan
Dhriti Banerjee
Flandrianto Sih Palimirmo
Arif Wibowo
Hyun-Woo Kim
author_sort Shantanu Kundu
title Mitochondrial DNA-based investigation of dead rorqual (Cetacea: Balaenopteridae) from the west coast of India
title_short Mitochondrial DNA-based investigation of dead rorqual (Cetacea: Balaenopteridae) from the west coast of India
title_full Mitochondrial DNA-based investigation of dead rorqual (Cetacea: Balaenopteridae) from the west coast of India
title_fullStr Mitochondrial DNA-based investigation of dead rorqual (Cetacea: Balaenopteridae) from the west coast of India
title_full_unstemmed Mitochondrial DNA-based investigation of dead rorqual (Cetacea: Balaenopteridae) from the west coast of India
title_sort mitochondrial dna-based investigation of dead rorqual (cetacea: balaenopteridae) from the west coast of india
publisher The Korean Society of Fisheries and Aquatic Science
publishDate 2024
url https://doi.org/10.47853/FAS.2024.e6
https://doaj.org/article/4fe87fbc9d454be98443a3fdafd890a9
genre Balaenoptera musculus
genre_facet Balaenoptera musculus
op_source Fisheries and Aquatic Sciences, Vol 27, Iss 1, Pp 48-55 (2024)
op_relation http://www.e-fas.org/archive/view_article?doi=10.47853/FAS.2024.e6
https://doaj.org/toc/2234-1757
doi:10.47853/FAS.2024.e6
2234-1757
https://doaj.org/article/4fe87fbc9d454be98443a3fdafd890a9
op_doi https://doi.org/10.47853/FAS.2024.e6
container_title Fisheries and Aquatic Sciences
container_volume 27
container_issue 1
container_start_page 48
op_container_end_page 55
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