Unrecognized diversity and distribution of soil algae from Maritime Antarctica (Fildes Peninsula, King George Island)
IntroductionEukaryotic algae in the top few centimeters of fellfield soils of ice-free Maritime Antarctica have many important effects on their habitat, such as being significant drivers of organic matter input into the soils and reducing the impact of wind erosion by soil aggregate formation. To be...
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ftdoajarticles:oai:doaj.org/article:4468adbde8134f46b28fac3b34d4ac69 2023-07-23T04:15:48+02:00 Unrecognized diversity and distribution of soil algae from Maritime Antarctica (Fildes Peninsula, King George Island) Nataliya Rybalka Matthias Blanke Ana Tzvetkova Angela Noll Christian Roos Jens Boy Diana Boy Daniel Nimptsch Roberto Godoy Thomas Friedl 2023-06-01T00:00:00Z https://doi.org/10.3389/fmicb.2023.1118747 https://doaj.org/article/4468adbde8134f46b28fac3b34d4ac69 EN eng Frontiers Media S.A. https://www.frontiersin.org/articles/10.3389/fmicb.2023.1118747/full https://doaj.org/toc/1664-302X 1664-302X doi:10.3389/fmicb.2023.1118747 https://doaj.org/article/4468adbde8134f46b28fac3b34d4ac69 Frontiers in Microbiology, Vol 14 (2023) soil algae green algae Xanthophyceae Antarctica Fildes Peninsula paired-end (ITS2) sequencing Microbiology QR1-502 article 2023 ftdoajarticles https://doi.org/10.3389/fmicb.2023.1118747 2023-07-02T00:39:57Z IntroductionEukaryotic algae in the top few centimeters of fellfield soils of ice-free Maritime Antarctica have many important effects on their habitat, such as being significant drivers of organic matter input into the soils and reducing the impact of wind erosion by soil aggregate formation. To better understand the diversity and distribution of Antarctic terrestrial algae, we performed a pilot study on the surface soils of Meseta, an ice-free plateau mountain crest of Fildes Peninsula, King George Island, being hardly influenced by the marine realm and anthropogenic disturbances. It is openly exposed to microbial colonization from outside Antarctica and connected to the much harsher and dryer ice-free zones of the continental Antarctic. A temperate reference site under mild land use, SchF, was included to further test for the Meseta algae distribution in a contrasting environment.MethodsWe employed a paired-end metabarcoding analysis based on amplicons of the highly variable nuclear-encoded ITS2 rDNA region, complemented by a clone library approach. It targeted the four algal classes, Chlorophyceae, Trebouxiophyceae, Ulvophyceae, and Xanthophyceae, representing key groups of cold-adapted soil algae.ResultsA surprisingly high diversity of 830 algal OTUs was revealed, assigned to 58 genera in the four targeted algal classes. Members of the green algal class Trebouxiophyceae predominated in the soil algae communities. The major part of the algal biodiversity, 86.1% of all algal OTUs, could not be identified at the species level due to insufficient representation in reference sequence databases. The classes Ulvophyceae and Xanthophyceae exhibited the most unknown species diversity. About 9% of the Meseta algae species diversity was shared with that of the temperate reference site in Germany.DiscussionIn the small portion of algal OTUs for which their distribution could be assessed, the entire ITS2 sequence identity with references shows that the soil algae likely have a wide distribution beyond the Polar regions. ... Article in Journal/Newspaper Antarc* Antarctic Antarctica King George Island Directory of Open Access Journals: DOAJ Articles Antarctic Fildes ENVELOPE(-58.817,-58.817,-62.217,-62.217) Fildes peninsula ENVELOPE(-58.948,-58.948,-62.182,-62.182) King George Island Plateau Mountain ENVELOPE(-133.935,-133.935,63.104,63.104) Frontiers in Microbiology 14 |
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Directory of Open Access Journals: DOAJ Articles |
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English |
topic |
soil algae green algae Xanthophyceae Antarctica Fildes Peninsula paired-end (ITS2) sequencing Microbiology QR1-502 |
spellingShingle |
soil algae green algae Xanthophyceae Antarctica Fildes Peninsula paired-end (ITS2) sequencing Microbiology QR1-502 Nataliya Rybalka Matthias Blanke Ana Tzvetkova Angela Noll Christian Roos Jens Boy Diana Boy Daniel Nimptsch Roberto Godoy Thomas Friedl Unrecognized diversity and distribution of soil algae from Maritime Antarctica (Fildes Peninsula, King George Island) |
topic_facet |
soil algae green algae Xanthophyceae Antarctica Fildes Peninsula paired-end (ITS2) sequencing Microbiology QR1-502 |
description |
IntroductionEukaryotic algae in the top few centimeters of fellfield soils of ice-free Maritime Antarctica have many important effects on their habitat, such as being significant drivers of organic matter input into the soils and reducing the impact of wind erosion by soil aggregate formation. To better understand the diversity and distribution of Antarctic terrestrial algae, we performed a pilot study on the surface soils of Meseta, an ice-free plateau mountain crest of Fildes Peninsula, King George Island, being hardly influenced by the marine realm and anthropogenic disturbances. It is openly exposed to microbial colonization from outside Antarctica and connected to the much harsher and dryer ice-free zones of the continental Antarctic. A temperate reference site under mild land use, SchF, was included to further test for the Meseta algae distribution in a contrasting environment.MethodsWe employed a paired-end metabarcoding analysis based on amplicons of the highly variable nuclear-encoded ITS2 rDNA region, complemented by a clone library approach. It targeted the four algal classes, Chlorophyceae, Trebouxiophyceae, Ulvophyceae, and Xanthophyceae, representing key groups of cold-adapted soil algae.ResultsA surprisingly high diversity of 830 algal OTUs was revealed, assigned to 58 genera in the four targeted algal classes. Members of the green algal class Trebouxiophyceae predominated in the soil algae communities. The major part of the algal biodiversity, 86.1% of all algal OTUs, could not be identified at the species level due to insufficient representation in reference sequence databases. The classes Ulvophyceae and Xanthophyceae exhibited the most unknown species diversity. About 9% of the Meseta algae species diversity was shared with that of the temperate reference site in Germany.DiscussionIn the small portion of algal OTUs for which their distribution could be assessed, the entire ITS2 sequence identity with references shows that the soil algae likely have a wide distribution beyond the Polar regions. ... |
format |
Article in Journal/Newspaper |
author |
Nataliya Rybalka Matthias Blanke Ana Tzvetkova Angela Noll Christian Roos Jens Boy Diana Boy Daniel Nimptsch Roberto Godoy Thomas Friedl |
author_facet |
Nataliya Rybalka Matthias Blanke Ana Tzvetkova Angela Noll Christian Roos Jens Boy Diana Boy Daniel Nimptsch Roberto Godoy Thomas Friedl |
author_sort |
Nataliya Rybalka |
title |
Unrecognized diversity and distribution of soil algae from Maritime Antarctica (Fildes Peninsula, King George Island) |
title_short |
Unrecognized diversity and distribution of soil algae from Maritime Antarctica (Fildes Peninsula, King George Island) |
title_full |
Unrecognized diversity and distribution of soil algae from Maritime Antarctica (Fildes Peninsula, King George Island) |
title_fullStr |
Unrecognized diversity and distribution of soil algae from Maritime Antarctica (Fildes Peninsula, King George Island) |
title_full_unstemmed |
Unrecognized diversity and distribution of soil algae from Maritime Antarctica (Fildes Peninsula, King George Island) |
title_sort |
unrecognized diversity and distribution of soil algae from maritime antarctica (fildes peninsula, king george island) |
publisher |
Frontiers Media S.A. |
publishDate |
2023 |
url |
https://doi.org/10.3389/fmicb.2023.1118747 https://doaj.org/article/4468adbde8134f46b28fac3b34d4ac69 |
long_lat |
ENVELOPE(-58.817,-58.817,-62.217,-62.217) ENVELOPE(-58.948,-58.948,-62.182,-62.182) ENVELOPE(-133.935,-133.935,63.104,63.104) |
geographic |
Antarctic Fildes Fildes peninsula King George Island Plateau Mountain |
geographic_facet |
Antarctic Fildes Fildes peninsula King George Island Plateau Mountain |
genre |
Antarc* Antarctic Antarctica King George Island |
genre_facet |
Antarc* Antarctic Antarctica King George Island |
op_source |
Frontiers in Microbiology, Vol 14 (2023) |
op_relation |
https://www.frontiersin.org/articles/10.3389/fmicb.2023.1118747/full https://doaj.org/toc/1664-302X 1664-302X doi:10.3389/fmicb.2023.1118747 https://doaj.org/article/4468adbde8134f46b28fac3b34d4ac69 |
op_doi |
https://doi.org/10.3389/fmicb.2023.1118747 |
container_title |
Frontiers in Microbiology |
container_volume |
14 |
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1772176835396763648 |