Validation of the F-POD-A fully automated cetacean monitoring system.

The F-POD, an echolocation-click logging device, is commonly used for passive acoustic monitoring of cetaceans. This paper presents the first assessment of the error-rate of fully automated analysis by this system, a description of the F-POD hardware, and a description of the KERNO-F v1.0 classifier...

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Published in:PLOS ONE
Main Authors: Julia Ivanchikova, Nicholas Tregenza
Format: Article in Journal/Newspaper
Language:English
Published: Public Library of Science (PLoS) 2023
Subjects:
R
Q
Online Access:https://doi.org/10.1371/journal.pone.0293402
https://doaj.org/article/3f867306179046a0912235448fe8711e
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spelling ftdoajarticles:oai:doaj.org/article:3f867306179046a0912235448fe8711e 2024-01-14T10:07:28+01:00 Validation of the F-POD-A fully automated cetacean monitoring system. Julia Ivanchikova Nicholas Tregenza 2023-01-01T00:00:00Z https://doi.org/10.1371/journal.pone.0293402 https://doaj.org/article/3f867306179046a0912235448fe8711e EN eng Public Library of Science (PLoS) https://doi.org/10.1371/journal.pone.0293402 https://doaj.org/toc/1932-6203 1932-6203 doi:10.1371/journal.pone.0293402 https://doaj.org/article/3f867306179046a0912235448fe8711e PLoS ONE, Vol 18, Iss 11, p e0293402 (2023) Medicine R Science Q article 2023 ftdoajarticles https://doi.org/10.1371/journal.pone.0293402 2023-12-17T01:44:45Z The F-POD, an echolocation-click logging device, is commonly used for passive acoustic monitoring of cetaceans. This paper presents the first assessment of the error-rate of fully automated analysis by this system, a description of the F-POD hardware, and a description of the KERNO-F v1.0 classifier which identifies click trains. Since 2020, twenty F-POD loggers have been used in the BlackCeTrends project by research teams from Bulgaria, Georgia, Romania, Türkiye, and Ukraine with the aim of investigating trends of relative abundance in populations of cetaceans of the Black Sea. Acoustic data from this project analysed here comprises 9 billion raw data clicks in total, of which 297 million were classified by KERNO-F as Narrow Band High Frequency (NBHF) clicks (harbour porpoise clicks) and 91 million as dolphin clicks. Such data volumes require a reliable automated system of analysis, which we describe. A total of 16,805 Detection Positive Minutes (DPM) were individually inspected and assessed by a visual check of click train characteristics in each DPM. To assess the overall error rate in each species group we investigated 2,000 DPM classified as having NBHF clicks and 2,000 DPM classified as having dolphin clicks. The fraction of NBHF DPM containing misclassified NBHF trains was less than 0.1% and for dolphins the corresponding error-rate was 0.97%. For both species groups (harbour porpoises and dolphins), these error-rates are acceptable for further study of cetaceans in the Black Sea using the automated classification without further editing of the data. The main sources of errors were 0.17% of boat sonar DPMs misclassified as harbour porpoises, and 0.14% of harbour porpoise DPMs misclassified as dolphins. The potential to estimate the rate at which these sources generate errors makes possible a new predictive approach to overall error estimation. Article in Journal/Newspaper Harbour porpoise Directory of Open Access Journals: DOAJ Articles PLOS ONE 18 11 e0293402
institution Open Polar
collection Directory of Open Access Journals: DOAJ Articles
op_collection_id ftdoajarticles
language English
topic Medicine
R
Science
Q
spellingShingle Medicine
R
Science
Q
Julia Ivanchikova
Nicholas Tregenza
Validation of the F-POD-A fully automated cetacean monitoring system.
topic_facet Medicine
R
Science
Q
description The F-POD, an echolocation-click logging device, is commonly used for passive acoustic monitoring of cetaceans. This paper presents the first assessment of the error-rate of fully automated analysis by this system, a description of the F-POD hardware, and a description of the KERNO-F v1.0 classifier which identifies click trains. Since 2020, twenty F-POD loggers have been used in the BlackCeTrends project by research teams from Bulgaria, Georgia, Romania, Türkiye, and Ukraine with the aim of investigating trends of relative abundance in populations of cetaceans of the Black Sea. Acoustic data from this project analysed here comprises 9 billion raw data clicks in total, of which 297 million were classified by KERNO-F as Narrow Band High Frequency (NBHF) clicks (harbour porpoise clicks) and 91 million as dolphin clicks. Such data volumes require a reliable automated system of analysis, which we describe. A total of 16,805 Detection Positive Minutes (DPM) were individually inspected and assessed by a visual check of click train characteristics in each DPM. To assess the overall error rate in each species group we investigated 2,000 DPM classified as having NBHF clicks and 2,000 DPM classified as having dolphin clicks. The fraction of NBHF DPM containing misclassified NBHF trains was less than 0.1% and for dolphins the corresponding error-rate was 0.97%. For both species groups (harbour porpoises and dolphins), these error-rates are acceptable for further study of cetaceans in the Black Sea using the automated classification without further editing of the data. The main sources of errors were 0.17% of boat sonar DPMs misclassified as harbour porpoises, and 0.14% of harbour porpoise DPMs misclassified as dolphins. The potential to estimate the rate at which these sources generate errors makes possible a new predictive approach to overall error estimation.
format Article in Journal/Newspaper
author Julia Ivanchikova
Nicholas Tregenza
author_facet Julia Ivanchikova
Nicholas Tregenza
author_sort Julia Ivanchikova
title Validation of the F-POD-A fully automated cetacean monitoring system.
title_short Validation of the F-POD-A fully automated cetacean monitoring system.
title_full Validation of the F-POD-A fully automated cetacean monitoring system.
title_fullStr Validation of the F-POD-A fully automated cetacean monitoring system.
title_full_unstemmed Validation of the F-POD-A fully automated cetacean monitoring system.
title_sort validation of the f-pod-a fully automated cetacean monitoring system.
publisher Public Library of Science (PLoS)
publishDate 2023
url https://doi.org/10.1371/journal.pone.0293402
https://doaj.org/article/3f867306179046a0912235448fe8711e
genre Harbour porpoise
genre_facet Harbour porpoise
op_source PLoS ONE, Vol 18, Iss 11, p e0293402 (2023)
op_relation https://doi.org/10.1371/journal.pone.0293402
https://doaj.org/toc/1932-6203
1932-6203
doi:10.1371/journal.pone.0293402
https://doaj.org/article/3f867306179046a0912235448fe8711e
op_doi https://doi.org/10.1371/journal.pone.0293402
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